Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03804 AAAATAACCTCTTATTGAATGGAAATAATTTCTTTCATGATTATTATCTGTTACTTACTTGTTTCTTCTCTGAAAATTTCTGCACATAACCTCAGCGTGTCACAGTCTATCATTGATGGCATGACCTTATTGTCCCAAAGTGGAGTATTTGAGCTAGGTTTCTTCAGCCCCGGCAATTCAACCAAACGTTACCTGGGTATTTGGTACAAAAGGATTCCTATTCAAAGTGTTGTTTGGGTCGCAAACAGGGCAAACCCCATCAATGATACCTCAGGAATCTTAACATTAAGAAGTACAGGAAATCTTGAGCTCAGGCAAAACAACACCATTGTTTGGTATTCAAATATAACCTATCCAATACAAGCCCAGAATCCAGTGGCAGAGCTCTTAGACAATGGCAATCTTGTGGTAAGAAATGAGGGAGACTCAGATTCTGAGAAGTACCCGTGGCAAAGCTTTGATTTTCCTTCGGATACACTTTTGCCCGGGATGAAGATGGGATGGGACCTCCGAACAGGTCTGGAACGGAAAATAACGTCTTGGAAGGGTCTAGATAATCCATCTCCGGGACAACTTTCTTGGGGTCTAATGCTGCATAATTATCCAGAGTTTTATCTGATGATAGGAAAACAAAAGTACTTCCGCATTGGACCCTGGAATGGACTTCATTTTAGTGGATTGTCAAATCAAAATCCAAACCCGGTGTATGCATTCGAGTATGTCACTACAAATGATCTCATGTACGCCTCAAATAAGGTTGAGATGTTCTACTCATTTACTCTCAAGAATAGTTCTGTATTTGCCCAAGTCAAAATAAATGAAACCACCTCGAGTATCCAAACAACAGTATGGGAGAAGGACTGGGAAACATGGAGGCTTTACCAAGTTGCCCCCCGTGATTCCTGTGATGTATATGCATTCTGTGGAGCCTATGGGAATTGTAGGATTACAGAATCACCTCCGTGCAAATGTTTAGAAGGATTCAGTCCAAAGTCTCCACAAGAATGGAATGTAATGAATTGGAGCCACGGATGCATCCAACCTAAACCATTAAGCTGCAATGACAGCTACACTGATCAGTTTGTCAAAAATGTAGGCCTGAAAGTACCAGATACTACACGTACTTGGTTGGATGAGAATATTGATTTGGAGGAATGCAGAATCAAATGCTTGAATAATTGTTCTTGCATGGCCTATGCTAATTCAGACGTAAGAGGTCAGGGTAGTGGTTGTGTCCATTGGTTTGGTGATCTAATTGACATAAGACAATTTGAAACTGGCGGGCAAGATCTATATGTTCGTATGCCAGCTTTGGAGTTAGAGGAGAAACTGGGACTCCGCCAAAGCGTGAAGATAGTAGTAGCTGCAACAATTGCAGGAATTACTGGGATACTTTCAGTTTGCATTTTTGCCATATACAGGGTCCGAAGAAGCATTTCTGTTCCAATCTCTTTCTTGTGCTGTCCAGATAACTTAAAAACAAAAGATAACATAAAAAAACAACTAGAAGATCTGGATCTGCCATTGTTTGACCTGCTAACAATCTCTACTGCCACTAATAATTTCTCAAAGAGTAATAAGATTGGACAAGGTGGTTTTGGATCTGTATATAAGGGAAAATTAGCAGATGGGAAAGAAATTGCTGTCAAGAGACTTTCAAGCAGTTCTGGACAAGGACTAACTGAGTTCATAACGGAAGTAAAACTGATTGCAAAGCTTCAACACCGAAATCTCGTAAAGCTTCTTGGCTGTTGCATTAAAGGACAAGAAAAATTACTAGTATATGAATACATGGTTAATGGCAGCCTAGACTCCTTCATTTTTGATCGAATAAAAGGAAAAACTCTGGACTGGCCTACACGCTTCCACATAATATTTGGAATAGCTAGGGGGCTTTTGTATCTTCATCAAGATTCCCGTTTAAGAATCATCCATAGAGATCTCAAAGCAAGTAATGTTTTAATAGATGAAAAGTTAAATCCAAAAATATCAGATTTTGGAATGGCTAGAGCTTTTGGAGGAGATCAAATCGAAGGAAACACAAATAGAGTTGTCGGGACATATGGATACATGGCCCCAGAATATGCTGTTGATGGGTTATTTTCCATCAAATCTGATGTTTTTAGCTTTGGTATTTTATTGTTGGAGATTATCTGCGGAAACAAAAATAGAGCTCTATGTCATGAAAACCAGACTCTTAACCTTGTTGGTTATGCCTGGTCACTTTGGAAAGAGCAAAATGTTCTACAGTTGATTGACTCAAACATACAGAAGTCATGCGTCATTGCAGAAGTACTGCGATGCTTACATGTTAGTCTCTTGTGCGTGCAACAATACCCAGAGGATAGACCAAGCATGAGCTCAGTAATTCAAATGTTAGGCAGTGAGATGGAATTGGTTGAGCCAAAAGAGCCTGGCTTCTTTCCAAAGAAGATTTCTGATGAAGAAAATTTAAAGACAGATCTAAACCAAATTACTTCACATGGTGAATTAACCATTTCCTCATTAAATGGCCGTTTCTTCTCTGAAATGTCAGAGTCTATCATTGATGGCAAGACTTTATTGTACCAAATTGGAGTGATTGAACTTGGTTTCTTCTGCCCCGGCAATTCCACAAAACCTTACCTGGTAATTTTGTACAAAAGGATTCCTATTCAAAGTGTTGTTTGGATCGCAAACAGGGCAAACCCGATCAATGATACCTCATGCATCTTAACATTAAGAAGCACAGGAAATAATCTTGAGCTCAGGCAAAAAGACACCGTTGTTTGGTATTCAAATATAACCTATCCAATAGAAGCACAGAATCCAGTGGTAGAGCTCTTGGACAGTGGCAATGTTGTGGTAAGAATTGAGGGAAACCCAGATTCAGAGAATTGTTTGTTTGTTCGTTCGATCAAAATCAACCAAGAAGAGCAACCCGGACACCGCCAAAGCGTGAAGATAGTAGTAGCTGCAACAGTTTGCATTTCTGCCATAGAGTCCGAAGAAGCATTTCTGCTAAAATAT 3009 0.3965 MEIISFMIIICYLLVSSLKISAHNLSVSQSIIDGMTLLSQSGVFELGFFSPGNSTKRYLGIWYKRIPIQSVVWVANRANPINDTSGILTLRSTGNLELRQNNTIVWYSNITYPIQAQNPVAELLDNGNLVVRNEGDSDSEKYPWQSFDFPSDTLLPGMKMGWDLRTGLERKITSWKGLDNPSPGQLSWGLMLHNYPEFYLMIGKQKYFRIGPWNGLHFSGLSNQNPNPVYAFEYVTTNDLMYASNKVEMFYSFTLKNSSVFAQVKINETTSSIQTTVWEKDWETWRLYQVAPRDSCDVYAFCGAYGNCRITESPPCKCLEGFSPKSPQEWNVMNWSHGCIQPKPLSCNDSYTDQFVKNVGLKVPDTTRTWLDENIDLEECRIKCLNNCSCMAYANSDVRGQGSGCVHWFGDLIDIRQFETGGQDLYVRMPALELEEKLGLRQSVKIVVAATIAGITGILSVCIFAIYRVRRSISVPISFLCCPDNLKTKDNIKKQLEDLDLPLFDLLTISTATNNFSKSNKIGQGGFGSVYKGKLADGKEIAVKRLSSSSGQGLTEFITEVKLIAKLQHRNLVKLLGCCIKGQEKLLVYEYMVNGSLDSFIFDRIKGKTLDWPTRFHIIFGIARGLLYLHQDSRLRIIHRDLKASNVLIDEKLNPKISDFGMARAFGGDQIEGNTNRVVGTYGYMAPEYAVDGLFSIKSDVFSFGILLLEIICGNKNRALCHENQTLNLVGYAWSLWKEQNVLQLIDSNIQKSCVIAEVLRCLHVSLLCVQQYPEDRPSMSSVIQMLGSEMELVEPKEPGFFPKKISDEENLKTDLNQITSHGELTISSLNGRFFSEMSESIIDGKTLLYQIGVIELGFFCPGNSTKPYLVILYKRIPIQSVVWIANRANPINDTSCILTLRSTGNNLELRQKDTVVWYSNITYPIEAQNPVVELLDSGNVVVRIEGNPDSENCLFVRSIKINQEEQPGHRQSVKIVVAATVCISAIESEEAFLLKY 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03804 997 Gene3D Transferase(Phosphotransferase) domain 1 592 798 - -
Pste1g03804 997 Gene3D - 16 147 IPR036426 -
Pste1g03804 997 Gene3D - 837 956 IPR036426 -
Pste1g03804 997 CDD STKc_IRAK 522 787 - -
Pste1g03804 997 SMART ntp_6 350 429 IPR003609 -
Pste1g03804 997 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Pste1g03804 997 CDD B_lectin 28 150 IPR001480 -
Pste1g03804 997 SUPERFAMILY alpha-D-mannose-specific plant lectins 869 948 IPR036426 -
Pste1g03804 997 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 778 - -
Pste1g03804 997 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 180 IPR036426 -
Pste1g03804 997 CDD B_lectin 839 950 IPR001480 -
Pste1g03804 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Pste1g03804 997 SMART blect_4 28 150 IPR001480 -
Pste1g03804 997 SMART blect_4 839 949 IPR001480 -
Pste1g03804 997 Gene3D Phosphorylase Kinase; domain 1 481 591 - -
Pste1g03804 997 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 592 795 - -
Pste1g03804 997 ProSiteProfiles Bulb-type lectin domain profile. 22 144 IPR001480 -
Pste1g03804 997 SUPERFAMILY Protein kinase-like (PK-like) 498 787 IPR011009 -
Pste1g03804 997 Pfam Protein tyrosine and serine/threonine kinase 518 787 IPR001245 GO:0004672|GO:0006468
Pste1g03804 997 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 483 591 - -
Pste1g03804 997 CDD PAN_AP_plant 344 430 - -
Pste1g03804 997 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 147 - -
Pste1g03804 997 Pfam PAN-like domain 349 415 IPR003609 -
Pste1g03804 997 Pfam D-mannose binding lectin 71 176 IPR001480 -
Pste1g03804 997 Pfam D-mannose binding lectin 882 951 IPR001480 -
Pste1g03804 997 ProSiteProfiles Bulb-type lectin domain profile. 833 956 IPR001480 -
Pste1g03804 997 Pfam S-locus glycoprotein domain 208 326 IPR000858 GO:0048544
Pste1g03804 997 ProSiteProfiles PAN/Apple domain profile. 347 430 IPR003609 -
Pste1g03804 997 SMART serkin_6 516 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03804 997 ProSiteProfiles Protein kinase domain profile. 516 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03804 Pste-Chr1 18859238 18863688 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03804 443 804 Receptor kinase-like Gene Family AT4G23190 50.543 6.04e-120 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03804 PK_Tyr_Ser-Thr 1.9e-51 CL0016