Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03802 TTCTCTCTGACTCTTATATATATGTCTCCGCTCCTAACAATTCAACCCAACGAAAACACGTTCTGAGTATGATGAGTTGGAGAGCAGGGAGGGTTAACCGTCGGAGAAAGCCTGATTTGATGCTGGACCTCAACCATGATCCCCCGGCGGAGGTGGTGGGCCCCTCCACGCTGCAACCACTACAACAACGGCCACAACCTCAAACTCCTGCTGCTGCCAACAATGACGATGATGATGTCGTTGAATGTTCCCCTAGGGCTTTTGAGCAGGCTAGGCTCAATTCTGAAAGGAGGAAAGTTCGCAGGAGGACTATCGTTACTTTAAACGAAGTTATTGGTATTATCTTGACTTTGAATAGCTTGGAACCCGAATCCTTACAAAATTCACCTGAAGATGGGAGCAGAGGAACACCAGAGGATCACCAAAATCAAACAATCATCAACGTGGATCCTCAAAACCCAGCAATCATCAGTGCTGATCCATTAAACCAAGCTATCATCAACGCTGATCCTCAAAACCAAACAATCATCAATGCCGATCCTCAGAACCAAACAATCATCATTGGCAATTCCCAGAACCAAATAATCACCAATGGGGATCCTCAAAACCAAATAATCATCAATGGCGATTCTCAAAACCGAACCATCATCATTGACCATTCTGAAAACCAAACAATCATCATTGGAGATCCTCCAAACCAAACCATCATCAGTAACAATCCTCAAAACCGATGCATCATCAATGGCCATCTTTATGTAAATTTGGAAAGCAGCAGCCATTCTGTGGTAACTGATGAAACTGTTCCGAAGTCACCTGAAAACAAGTCACTTGAACCTGTTTTCACTTGTCCAATATGTATGGCCCCTTTGGTTGAAGAAGTGTCAACAAAGTGTGGTCATATTTTTTGCAAGGAATGCATTAAGACTGCTGTAGCTGCAAATGGGAAATGCCCTACCTGTAGAAAGAAGGTTACAAGGAACTCACTAATACGAGACGTCTATGCCAGCATTAGCAAGGAGAATAAGGATTCAGGAATGAAAGGATGCTCTGGAGATTTTTGTGTTGTTGCTGACAATCCCTGTTCTGTTACCATGATTACTTTGGTTTTAAATTATAATTATTTCATGTTTGGATTTGTTCACGGCCGGGTCTACACAACCCCTAATCAGAGAGCATCAATGAATTCC 1187 0.4288 MMSWRAGRVNRRRKPDLMLDLNHDPPAEVVGPSTLQPLQQRPQPQTPAAANNDDDDVVECSPRAFEQARLNSERRKVRRRTIVTLNEVIGIILTLNSLEPESLQNSPEDGSRGTPEDHQNQTIINVDPQNPAIISADPLNQAIINADPQNQTIINADPQNQTIIIGNSQNQIITNGDPQNQIIINGDSQNRTIIIDHSENQTIIIGDPPNQTIISNNPQNRCIINGHLYVNLESSSHSVVTDETVPKSPENKSLEPVFTCPICMAPLVEEVSTKCGHIFCKECIKTAVAANGKCPTCRKKVTRNSLIRDVYASISKENKDSGMKGCSGDFCVVADNPCSVTMITLVLNYNYFMFGFVHGRVYTTPNQRASMNS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03802 373 MobiDBLite consensus disorder prediction 15 56 - -
Pste1g03802 373 PANTHER ELFLESS, ISOFORM B 5 130 - -
Pste1g03802 373 ProSitePatterns Zinc finger RING-type signature. 275 284 IPR017907 -
Pste1g03802 373 ProSiteProfiles Zinc finger RING-type profile. 260 298 IPR001841 -
Pste1g03802 373 MobiDBLite consensus disorder prediction 100 122 - -
Pste1g03802 373 SUPERFAMILY RING/U-box 254 310 - -
Pste1g03802 373 SMART ring_2 260 297 IPR001841 -
Pste1g03802 373 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 233 331 IPR013083 -
Pste1g03802 373 MobiDBLite consensus disorder prediction 33 50 - -
Pste1g03802 373 Pfam Zinc finger, C3HC4 type (RING finger) 260 297 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03802 258 308 C3H Transcription Factor Family AT5G48655 74.510 7.38e-22 90.5