Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03800 CAACTGATGACTACGAAAGCTGTGTGTCTCGATGGATATTCTTTCTTTCATGACTGTGGCTGCTATCGTACTTAGTCCTTCTCTAATAATTTCCTTAGCAAATGATTCTATTCACGTGCTCCACTTGATGAGGGATGGGCATACCTTGGTGTCAAAAGGAGGAAAGTTTGAACTTGGGTTTTTCAGCCCAGGTAGTTCCCAGAAACGTTACCTGGGAATTTGGTACAAGAATATACCTATTCAAACAGTTGTTTGGGTTGCTAACAGAGCCAACCCCATCAATGATTCCTCAGGTATCTTAACACTCAACAGCACAGGAAATCTTGTTCTTACCCAAAATAGCTCTCTTGTTTGGTACACAAACAATAACTCTCACAAACAAGCACAGAATGCAGTGGCAGTGCTCTTGGAAAGTGGCAATCTTGTGATAAGAGATGAGGGAGAAACAAACCCAGAAGAGTATTTGTGGCAAAGCTTTGATTATCCAACAGATACACTCTTGCCAGGGATGAAACTGGGAAGCGACCTCAGAACTGGTCTTGAATGGAGATTTACTGCTTGGAAGAGTCCCGATGATCCATCACCAGGAGACATTAATTGGCTTTTGAAACGCTATAACTCTCCTGAATTCTATATGATGAAGGGAACCAAAAAGTTGGTCCGAACTGGACCTTGGAATGGCCTATATTTAAGTGGATTACCAGATCTACAGAACAACACCCTTTATCGCTTCAACTATGTCAACAATAACAATGAGATTTACTATTCCTTCAGCGTTGTGAATAATTTTATTATCACCAGAACTGTGGCAAACCAAACAGGTGTATTGTATCGGTATGTATGGGTGGAGGATGATAAAAATTGGAAGACATATAGATCTTACCCGAAAGAGTTTTGTGACACTTATGGTCTGTGTGGACCATACGGGAATTGCATAAGTACTCAATCACAAGTGTGCCAATGCTTAAAAGGTTTCACTCCAAAGTCATCACTGGCATGGAACTCATCAGATTGGTCTGGAGGATGTGTCCGCAATAAGCCATTAAGTTGCAAAGATAAACTCACAGATGGGTTTGTCAAATATAAAGGCCTGAAAGTTCCAGATACTACACATACTTGGTTGGATAAGAGTATTGGCATAGAAGAATGCAGAGTGAAGTGTTTGAATAATTGTTCTTGTATGGCCTATACTAATTCAGACATACGAGGTGAGGGCAGTGGTTGTGTCATGTGGTTTGGAGATCTTGTCGACATGCAACAGTTTGAAAATCGCGGCCAAGATCTATATATCAGGATGCCTGCTTCGGCGTTAGAACCCGTATATAGGATCAAGAACACGTCAACAATTGTTGCTTCCACAGTTGCTGCTATTTGCGGTGTTCTGTTACTGAGTTATTTTATATACAGAATGGGGAGGAACAGTCCAGAGAATTTATTGACTGAAACAGAAAATAACAATGAAAGACTTGTAAATGATCTGGATATCCCATTGTTTGATCTGCCAACAATTGTTTCGGCCACAAATGATTTCTCCACGAAAAATAAGATTGGACAAGGTGGTTTCGGACCTGTATACAGGGGATTACTAGTGAATGGCCAAGAAATTGCCGTGAAGACTCTATCAAGTAGCTCAGGACAAGGATTGACAGAGTTTTTAAATGAAGTAAAATTGATTGCAAAGCTTCAGCATCGAAATCTTGTCAAGCTTCTTGGTTGTTGCATTGAAGGACACGAAAATATTCTTGTTTATGAATACATGCCGAATGGAAGCCTCAATTCCTTCATTTTTGATGACACCAAAGGTAAATTAATAAGTTGGCCTCAGCGCTTCAACATAATCAGGGGAATTGCAAGGGGACTTATGTATCTTCACCAAGACTCCAGATTAAGAATTATCCATAGAGATCTCAAAGCAAGTAATGTTTTGCTTGATGAAAATTTGAATCCAAAAATATCAGATTTTGGAACGGCCAAAACCTTTGGAGGAGACCAAACTCAAGGAAACACAAAAAGAATAGTTGGAACTCATGGATACATGGCACCGGAATATGCTGTTGATGGATTGTTTTCAGTGAAATCTGATGTATTTAGCTTTGGCATTGTAATGCTGGAGGTTATATGTGGCAATAGAAATAGAGCATACTATCACACAGATAACACTCTTAATCTTGTCAGTCAGGCATGGAAAATGTGGAAAGAGAACAGAGCTATAGAACTGATAGACCCTAACATAAGGGACTCCTACGTTGCATCAGAAGTATTGCGTTGCATGCATGTTAGTCTCCTATGTGTGCAGCAGCACCCAGATGATAGACCTACCATGCACTCTGTGATTCTAATGTTGGATAGTGAGATGGAATTGGTTGAGCCTAAAGCACCTGGTTTCATTTCAAAACATGTTTCAACAGAAGTAGATTCAATGGAAAAAAGTTCAACGAACGAAGTTCATACTCTCTTTGAAACTAATAGGGTAGTATACGTTGTGATTTGCCGAACACCACGTCTAACTACCATTAGTATGTCACAGTCTATCAGTGATGGCAAGACCCTAGTGTCCAACAGAGGAGTGTTTGAGCTTGGTTTCTTCAGCCCAGGGAATTCAAAAAAACGTTATCTGGGGATTTGGTATAAAAACATTCCAATTGATAATGTTGTTTGGGTTGCAAACCCTGAAAAACCAATCAATGATTACTCAGGCATCTTAGCATTCAGCAGAACAGGCAATCTTGAGCTCAGACAAAACAAAACTGTTGTTTGGTCCGCAGCCTATAAAAAACAAGCACTGAATCCGGTTGCAGAGTTATTGGAAGGTGGCAATCTTGTGGTAAGAAACGAGGGGGACACAGACCAAGAAGGGTACTTGTGGCAAAGCTTTGACTATCCTTCAGACACAGTTTTGCCCGGAATGAAGTTGGGATGGGACCTCAGAACAGGTCTGGAACAGAAAATAACATCATGGAAGAGTCCTAATGATCCATCCCCTGGAAATTTTTCTTGGGGTCTAATGCTTCATAACTATCCTGAGTTTTGTATGACTAACAGATTGGTAAAATACTTCCGCACTGGACCCTGGAATGGACTTCAGTTTAGTGGATTATCAAATCAAAATCCAAATTCGGTGTATGAATTCCAGTATGTCACTACAAATGATCTCATGTATGCCTCCAATAAGGTGGAGATGTTCTACTCGTTCTCCATAAAAAATAGTTCTGTCATTCTCAGAGTCAAAATAAATGGAACCCTTTCCACGATGTTTATCCAAGTATGGTTGGAGGATAGAGGAGTATGGGCTGTTTATCAAACTACTCGGCGTGATTTCTGTGATCAGTATGCAGCTTGTGGAGTCTACGGGAATTGCATGATTACAGAATCACCTGTATGCCAATATTTAGAAGGATTCACTCCAAAGCCACCTCAACAATGGAAGGAATCTAATTGGAGCCAGGGATGTGTCCAACCTAAACCATTAAGCTGCAGCCACAACAAGGATCAGTTTGTGAAATATGTAGGCATGAAAGTTCCAGATACTACACGTACTTGGTTGGATGAGAATATTGATTTAGAGGAATTCAGAGCCAAATGCTTGAATAATTGCTCTTGCATGGCCTATGCTAACTCAGACGTAAGATATTTAGGTAGTGGTTGTGTCCATTGGTTTGGTGATTTAATTGACATCAGACAGTTTGAAACTGACGGGCAAGATCTCTATGTTCGGATGCCAGCTTTGGACTTAGAAGAGCAAGAAGGAAACCTACCAAAAGAAGAGGAACGTGGAACCAGCCGAAGCTCAAAGATAATAATTTCTACCACAAGTGCCGCACTGAGTTCGATACTTTCAGTTTCAATCCCTTCCTTAGGTTTTCCAGATAATTCGAAAACAAAAGATAACATCAGCAAACAGCTAGAAGATATGGATCTGCCATTGTTTGATCTGCTAACAATCTCTACTGCCACTAACAATTTCTCGTTGAGCAATAAGATTGGAGAAGGTGGTTTTGGATCTGTATATAAGAAAACATTGAATAAAATATTTGCAATTATGCAAGGAAAATTAGCAGATGGGAGAGAAATTGCTGTAAAGAGACTTTCAAGCAGTTCTAGACAAGGAATGACTGAGTTCATAACAGAAGTAAAATTGATTGCAAAGCTTCAACACCGAAACCTTGTAAAGCTTCTTGGATGTTGTTTTAGAGAAGAGAAATTACTAGTATATGAATACATGGTTAATGACAGCCTAGACTCCTTCATTTTTTTTGATACAATGAAAGGAAAACTTCTGGATTGGCCTCTACGCTTCAACATAATATTTGGAATAGCCAGGGGGCTTTTGTATCTTCATCAAGATTCCTGTCTATGGATCATCCATAGAGATCTCAAAGCAAATTTTGGAATGGTTAGAGCTTTTGGAGGAGACCAAACAGAAGGAAACACAAACAGAGTTGTTGGGACTTATGGATACATGGCCCCAACTTATGCTGTTGATGGGCTATTTTCAATCAAATCTGATGTTTTCAGCTTTGGTATTTTATTGTTGGAGATTATACGTGGCATGGACACTTTGGAAAGAGAAAAATGCGCCCATGTTAGTCTCTTTTGCGTGCAACAATACCCAGATGATAGACCAACTATGAGCTCAGTAATTCAAATGTTAGGGAGTGATGAGATAGATTCGGTTGAGCCAAAAGAGCCTGGTTTCTTTCCAAGGAAGATTTCGGATGAAGGAAATTTAAACACAAATCTAAACCAGATGACTTCAAATAATGAGTTAACCATTACATTAAATGGC 4786 0.3972 MDILSFMTVAAIVLSPSLIISLANDSIHVLHLMRDGHTLVSKGGKFELGFFSPGSSQKRYLGIWYKNIPIQTVVWVANRANPINDSSGILTLNSTGNLVLTQNSSLVWYTNNNSHKQAQNAVAVLLESGNLVIRDEGETNPEEYLWQSFDYPTDTLLPGMKLGSDLRTGLEWRFTAWKSPDDPSPGDINWLLKRYNSPEFYMMKGTKKLVRTGPWNGLYLSGLPDLQNNTLYRFNYVNNNNEIYYSFSVVNNFIITRTVANQTGVLYRYVWVEDDKNWKTYRSYPKEFCDTYGLCGPYGNCISTQSQVCQCLKGFTPKSSLAWNSSDWSGGCVRNKPLSCKDKLTDGFVKYKGLKVPDTTHTWLDKSIGIEECRVKCLNNCSCMAYTNSDIRGEGSGCVMWFGDLVDMQQFENRGQDLYIRMPASALEPVYRIKNTSTIVASTVAAICGVLLLSYFIYRMGRNSPENLLTETENNNERLVNDLDIPLFDLPTIVSATNDFSTKNKIGQGGFGPVYRGLLVNGQEIAVKTLSSSSGQGLTEFLNEVKLIAKLQHRNLVKLLGCCIEGHENILVYEYMPNGSLNSFIFDDTKGKLISWPQRFNIIRGIARGLMYLHQDSRLRIIHRDLKASNVLLDENLNPKISDFGTAKTFGGDQTQGNTKRIVGTHGYMAPEYAVDGLFSVKSDVFSFGIVMLEVICGNRNRAYYHTDNTLNLVSQAWKMWKENRAIELIDPNIRDSYVASEVLRCMHVSLLCVQQHPDDRPTMHSVILMLDSEMELVEPKAPGFISKHVSTEVDSMEKSSTNEVHTLFETNRVVYVVICRTPRLTTISMSQSISDGKTLVSNRGVFELGFFSPGNSKKRYLGIWYKNIPIDNVVWVANPEKPINDYSGILAFSRTGNLELRQNKTVVWSAAYKKQALNPVAELLEGGNLVVRNEGDTDQEGYLWQSFDYPSDTVLPGMKLGWDLRTGLEQKITSWKSPNDPSPGNFSWGLMLHNYPEFCMTNRLVKYFRTGPWNGLQFSGLSNQNPNSVYEFQYVTTNDLMYASNKVEMFYSFSIKNSSVILRVKINGTLSTMFIQVWLEDRGVWAVYQTTRRDFCDQYAACGVYGNCMITESPVCQYLEGFTPKPPQQWKESNWSQGCVQPKPLSCSHNKDQFVKYVGMKVPDTTRTWLDENIDLEEFRAKCLNNCSCMAYANSDVRYLGSGCVHWFGDLIDIRQFETDGQDLYVRMPALDLEEQEGNLPKEEERGTSRSSKIIISTTSAALSSILSVSIPSLGFPDNSKTKDNISKQLEDMDLPLFDLLTISTATNNFSLSNKIGEGGFGSVYKKTLNKIFAIMQGKLADGREIAVKRLSSSSRQGMTEFITEVKLIAKLQHRNLVKLLGCCFREEKLLVYEYMVNDSLDSFIFFDTMKGKLLDWPLRFNIIFGIARGLLYLHQDSCLWIIHRDLKANFGMVRAFGGDQTEGNTNRVVGTYGYMAPTYAVDGLFSIKSDVFSFGILLLEIIRGMDTLEREKCAHVSLFCVQQYPDDRPTMSSVIQMLGSDEIDSVEPKEPGFFPRKISDEGNLNTNLNQMTSNNELTITLNG 1585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03800 1585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Pste1g03800 1585 FunFam Os04g0303100 protein 63 208 - -
Pste1g03800 1585 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 149 - -
Pste1g03800 1585 CDD B_lectin 831 951 IPR001480 -
Pste1g03800 1585 SUPERFAMILY Protein kinase-like (PK-like) 1296 1571 IPR011009 -
Pste1g03800 1585 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 183 IPR036426 -
Pste1g03800 1585 CDD B_lectin 35 152 IPR001480 -
Pste1g03800 1585 SMART blect_4 831 951 IPR001480 -
Pste1g03800 1585 SMART blect_4 30 152 IPR001480 -
Pste1g03800 1585 ProSiteProfiles Bulb-type lectin domain profile. 825 945 IPR001480 -
Pste1g03800 1585 Gene3D - 822 948 IPR036426 -
Pste1g03800 1585 Gene3D - 19 149 IPR036426 -
Pste1g03800 1585 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 1280 1396 - -
Pste1g03800 1585 FunFam Os07g0541700 protein 1397 1473 - -
Pste1g03800 1585 CDD STKc_IRAK 506 772 - -
Pste1g03800 1585 ProSiteProfiles Protein kinase domain profile. 500 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03800 1585 CDD PAN_AP_plant 1145 1230 - -
Pste1g03800 1585 Pfam D-mannose binding lectin 874 977 IPR001480 -
Pste1g03800 1585 Pfam D-mannose binding lectin 72 178 IPR001480 -
Pste1g03800 1585 Gene3D Phosphorylase Kinase; domain 1 463 575 - -
Pste1g03800 1585 Gene3D Phosphorylase Kinase; domain 1 1276 1396 - -
Pste1g03800 1585 ProSiteProfiles Protein kinase domain profile. 1311 1585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03800 1585 FunFam Os04g0303100 protein 864 1007 - -
Pste1g03800 1585 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Pste1g03800 1585 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 762 - -
Pste1g03800 1585 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 822 948 - -
Pste1g03800 1585 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 576 779 - -
Pste1g03800 1585 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Pste1g03800 1585 Pfam S-locus glycoprotein domain 1009 1126 IPR000858 GO:0048544
Pste1g03800 1585 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 465 575 - -
Pste1g03800 1585 ProSiteProfiles PAN/Apple domain profile. 1148 1231 IPR003609 -
Pste1g03800 1585 CDD PAN_AP_plant 337 423 - -
Pste1g03800 1585 Gene3D Transferase(Phosphotransferase) domain 1 1397 1551 - -
Pste1g03800 1585 Gene3D Transferase(Phosphotransferase) domain 1 576 782 - -
Pste1g03800 1585 SMART serkin_6 500 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03800 1585 SMART serkin_6 1311 1540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03800 1585 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Pste1g03800 1585 SUPERFAMILY alpha-D-mannose-specific plant lectins 874 982 IPR036426 -
Pste1g03800 1585 Pfam Protein tyrosine and serine/threonine kinase 502 768 IPR001245 GO:0004672|GO:0006468
Pste1g03800 1585 Pfam Protein tyrosine and serine/threonine kinase 1312 1522 IPR001245 GO:0004672|GO:0006468
Pste1g03800 1585 SUPERFAMILY Protein kinase-like (PK-like) 481 771 IPR011009 -
Pste1g03800 1585 SMART ntp_6 343 422 IPR003609 -
Pste1g03800 1585 SMART ntp_6 1150 1229 IPR003609 -
Pste1g03800 1585 Pfam PAN-like domain 342 408 IPR003609 -
Pste1g03800 1585 Pfam PAN-like domain 1148 1215 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03800 Pste-Chr1 18832484 18841779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03800 434 804 Receptor kinase-like Gene Family AT4G05200 48.663 1.18e-116 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03800 PK_Tyr_Ser-Thr 1.9e-50 CL0016