Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03797 TTTATTCTTACCATGATGAATATCATAGGTTATATACTATTTTTTTCTTCTCTAGTAGTTTCCATAGCAGCAGAAGCATCATCCATTTCACAGTTTCACTCGCTCAGTTATGGAAAGACCATAGTTTCTTCTCCAAATCGAACCTTTGAACTTGGATTCTTCCATCTTGGAAATCCCAACAAAATCTACCTTGGGATTCGGTTCAAGAATATTCCAGTTCAAAACGTTGTTTGGGTTGCAAACGGTGGCAACCCAATCAATGATTCTTCTGCCATCTTGAAACTAAACAGTTCTGGCAATTTGGTTCTCACACACAACAGCATGGTTGTTTGGTGCACAAGTTCTCCAAAAGAAGCACTGAATCCAGTGGCTGAGCTCTTGGGTTCTGGAAATCTTGTGATAAGAGAAGAGAATGATACAAATCAAGAGGCTTATGTGTGGCAAAGCTTTGATTATCCATCAAATACAATGCTGTCAGGAATGAAGGTTGGATGGGACCTAAAAAGAAATCTAAGTATTCACCTCATAGCTTGGAAGAGTGATGATGATCCAACCCCAGGAGACTTATCATGGGGTGTTACACGGAACCATTATCCTGAGATTATTATGATGAAAGGAACAAAAAAGTATCACAGACTTGGACCATGGAATGGGTTGCGTTTCAGTGGCCAGCAAGATATGAAGCCTAATCCGGTTTATCACTATGATTTTGTCTCCAACAAGGACGAGGCTTATTACATATGGACCCTCAATCACAGTGATTTAATAAACAAAGTAGTACTTAACCAAACCAGACTAGAGCGTCCTCGTTATGTATGGTCAGAAGTTGATAAATCATGGAATCTTTATTCAACTCTGCCAGCAGACTACTGTGACCATTATGGCATTTGTGGAGCCAATGCATATTGCAGCTCTTCTGCATCACCAATGTGTGCATGTTTGCAAGGGTTCAAGCCTAAGTTTCCTGATAAATGGAACTCAGTGAACTGGTCCCAAGGATGTGTCCTTAAGGATATATTGAGTTGCAAGAATGATGGGTTTCTTGCTGTAGAAGGCTTGAAAGTTCCGGATACTGAACATACGTTTGTGGATAAAAGTGTTGATCTAGAGAAATGTAGAACGAAGTGCTTGAATAATTGTTCCTGCATGGCTTACACAAATTCAAACATAAGTGGAGCTGGCAGTGGTTGTGTCATGTGGTTTGGGGATTTATTTGACATCAGACAGTACTCAGATTCTAAAAGCGGGCAGAGGTTATGTATCCGGTTGCCTGCTTCAGAATTAGAGTCCGTCGGTCACAAGAGGCAGGCTACAATAAAAGTTTTAACCACCATTGCTGCAGCTTCAGGAATACTTGTACTCGGCATTTATCTTATCTGCAGAATCAAGAGGAATAATAAGAAATCAATGGCAGAAAATAACTGGGAAACATATGTGGATGATCTGGACCTTCCGTTGCTTGATTTTTCAATAGTTATGGCTGCCACTGATAATTTCTCAGAGGTGAACAAGATTGGAGAAGGTGGTTTTGGACCTGTATACTGGGGAAAATTAGCCACTGGGCTAGAAATTGCTGTAAAGCGACTTTCACAGAACTCGGGACAAGGAATAACTGAGTTTGTAAACGAAGTAAAACTGATTGCAAAACTTCAGCACCGAAATCTTGTAAAGCTTATAGGTTGTTGCATTCAGAAGAAAGAAAAAATATTGGTTTATGAATACATGGCTAACGGCAGCCTTGACTACTTCATATTTGATCATGCCAAAGGTAAATCACTTGACTGGCCAAAGCGATTATGCATAATTTGTGGAATTGCTCGAGGACTTATGTACCTTCATCAAGATTCTCGACTAAGAATTGTTCATAGAGATCTCAAAGGAAGTAATGTTTTATTAGATGATGATTTCCATCCAAAAATATCAGATTTTGGAATGGCTAAAACTGTTGGAAGAGAGGAAATTGAAGGAAACACAAATAAAATAGTTGGAACATTTGGGTACATGGCACCAGAGTATGCTGTTGATGGGAAATTTTCTGTGAAATCTGATGTCTTTAGCTTCGGTGTTTTACTCCTAGAGATAATATGTGGTACAAGAAATAGAAGACAATATCATGGAAAGCAGTATAACCTTGTTGATCATGCATGGACACAATGGAAATTGAACAGGGCTTTACAAATAATTGATCCAAACATTGAGGATTCATGCATTGATTCTGAAATCCTGCGTTGTATCCATGTTGGGCTGTTGTGCGTGCAACAATATCCAGAGGATAGACCTACCATGACTTCAGTAGTTTTAATGTTGGAAAGTGAGATGGAATTGGATGTGCCTATGCAGCCGGCTGTTTTTATGAGGAAGGAATCTGTTGAAAGAAGCTCAAGATCAAGTTGTTCAACCAATGCAATGACCATAACCTTAGTTGCTCGATGATAAATGAAAATCAACGATGTAACTACATATATCTTATAATTAAGCATAACTTCTAGTGTTTCAAAACCTTTATAGTCGTTCAGATGT 2520 0.3893 FILTMMNIIGYILFFSSLVVSIAAEASSISQFHSLSYGKTIVSSPNRTFELGFFHLGNPNKIYLGIRFKNIPVQNVVWVANGGNPINDSSAILKLNSSGNLVLTHNSMVVWCTSSPKEALNPVAELLGSGNLVIREENDTNQEAYVWQSFDYPSNTMLSGMKVGWDLKRNLSIHLIAWKSDDDPTPGDLSWGVTRNHYPEIIMMKGTKKYHRLGPWNGLRFSGQQDMKPNPVYHYDFVSNKDEAYYIWTLNHSDLINKVVLNQTRLERPRYVWSEVDKSWNLYSTLPADYCDHYGICGANAYCSSSASPMCACLQGFKPKFPDKWNSVNWSQGCVLKDILSCKNDGFLAVEGLKVPDTEHTFVDKSVDLEKCRTKCLNNCSCMAYTNSNISGAGSGCVMWFGDLFDIRQYSDSKSGQRLCIRLPASELESVGHKRQATIKVLTTIAAASGILVLGIYLICRIKRNNKKSMAENNWETYVDDLDLPLLDFSIVMAATDNFSEVNKIGEGGFGPVYWGKLATGLEIAVKRLSQNSGQGITEFVNEVKLIAKLQHRNLVKLIGCCIQKKEKILVYEYMANGSLDYFIFDHAKGKSLDWPKRLCIICGIARGLMYLHQDSRLRIVHRDLKGSNVLLDDDFHPKISDFGMAKTVGREEIEGNTNKIVGTFGYMAPEYAVDGKFSVKSDVFSFGVLLLEIICGTRNRRQYHGKQYNLVDHAWTQWKLNRALQIIDPNIEDSCIDSEILRCIHVGLLCVQQYPEDRPTMTSVVLMLESEMELDVPMQPAVFMRKESVERSSRSSCSTNAMTITLVAR 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03797 810 PIRSF SRK 1 810 IPR024171 GO:0004674
Pste1g03797 810 SMART ntp_6 342 423 IPR003609 -
Pste1g03797 810 SUPERFAMILY Protein kinase-like (PK-like) 485 787 IPR011009 -
Pste1g03797 810 ProSiteProfiles Protein kinase domain profile. 499 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03797 810 Pfam PAN-like domain 342 407 IPR003609 -
Pste1g03797 810 Pfam D-mannose binding lectin 76 179 IPR001480 -
Pste1g03797 810 Pfam Protein tyrosine and serine/threonine kinase 502 767 IPR001245 GO:0004672|GO:0006468
Pste1g03797 810 SMART blect_4 32 153 IPR001480 -
Pste1g03797 810 CDD STKc_IRAK 505 770 - -
Pste1g03797 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 776 - -
Pste1g03797 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 184 IPR036426 -
Pste1g03797 810 SMART serkin_6 499 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03797 810 Gene3D - 21 150 IPR036426 -
Pste1g03797 810 Gene3D Phosphorylase Kinase; domain 1 460 574 - -
Pste1g03797 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 150 - -
Pste1g03797 810 CDD PAN_AP_plant 340 424 - -
Pste1g03797 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Pste1g03797 810 Gene3D Transferase(Phosphotransferase) domain 1 575 781 - -
Pste1g03797 810 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Pste1g03797 810 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 760 - -
Pste1g03797 810 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Pste1g03797 810 CDD B_lectin 34 153 IPR001480 -
Pste1g03797 810 ProSiteProfiles PAN/Apple domain profile. 342 420 IPR003609 -
Pste1g03797 810 FunFam receptor-like serine/threonine-protein kinase SD1-8 469 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03797 Pste-Chr1 18793526 18797085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03797 439 782 Receptor kinase-like Gene Family AT4G23230 52.890 2.81e-121 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03797 PK_Tyr_Ser-Thr 4e-50 CL0016