Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03795 TATACACTGTTTGTCCCCTCTCTCATAGTTTTTGTTGCAGCAGACACAAAATTCATTGCACAGTCTCAGTCCCTGAGTTATGGGAAGACCATAGTTTCTTCCCCACGTGGAACCTTTGAACTTGGTTTCTTCAACGTCGGAAATCCCAACAAAATCTACCTCGGGATCCGGTACAAGAACATTCCAATCCAAAACGTTGTTTGGGTTGCAAACGGTGGCAATCCAATCAATGATTCCTCTGCCACCTTAAAACTAAACAGTTCTGGCGGCTTGGTGCTTACACACAACAACATGGTTGTTTGGAGCACAAGTTCTTCAAAAAATGCACAGGATCCAGTGGCAGAGCTCTTGGATTCTGGCAATCTTGTGATAAGGGAGAAAAATGAAGCAGAACTAGAAGTGAAAGAATATTTGTGGCAAAGTTTTGACTACCCTTCTAATACAATGTTGGCAGGAATGAAGGTTGGATGGGACCTCAAAAGAAATTTAAGTATTCGCCTTATAGCATGGAAGAGTTTTGATGATCCAAGCCCAGGAGACTTATCTTGGGGTGTTACTTTGCACCCTTATCCTGAGATCTACATGATGAAGGGAACCAAAAAGTATCACAGAGTTGGACCATGGAATGGTTTGCGTTTCAGTGGAAGGCCCGAAATGGCGGATAAAGATCCGATTTACCATTATGAGTTTGTGTCAAACAAGGAAGAAGTTTATTACACATGGACTCTCAAGCAGACAAATTTGCTATCCAAATTGGTACTTAACCAAACCACACAAGAACGTCCTCGTTATGTATGGTCAGAGACTGAAAAATCATGGATGTTTTATACAACGATGCCTGAAGACTACTGTGACCGTTATGGGGTTTGTGGAGCCAATTCATATTGCAGTACTTCTGCATATCCAATGTGTCAATGTTTAAAAGGGTTTGTGCCTAAGTCTCCGGAAAAATGGAACTCAATGGGTTGGACACAAGGATGTGTCCTCCAACATCCTTTGAGTTGCAAAACTGATGGGTTTGCCCTTGTGGGAGGTTTGAAAGTGCCAGATACTAAAGATACTTTTGTGGATGAGAGTATTGATCTAGAGCAATGCAGAACAAAGTGCTTGAATGACTGTTCCTGCATGGCATATACAAATTCAAATATAAGGGGAGAAGGCAGTGGCTGTGTCATGTGGTTTGGTGATTTATTTGACATCAAACTGTATCCTGTTCTAGAGAAAGGGCAGGGTCTATATATAAGGTTGCCTCCTTCAGAATTAGATAAGTCAAAAACAAAAGAGAACATAAAAAGACAGCTAAAAGATCTGGATGTGCCATTGTTTGATCTGGCAACAATCACTGCTGCCACTGACAGTTTCTCCTTAAATAATAAGATTGGACAAGGAGGTTTTGGACCTGTATATAAGGGAAAACTAGTGGATGGGCGAGAAATTGGAGTCAAGAGACTTTCTAGTAGGTCTGGACAAGGAATAGTGGAGTTCATAACAGAAGTAAAACTGATTGCAAAGCTTCAACACAGAAATCTTGTAAAGCTTCTTGGTTGTTGCATTAAAGGACAAGAAAAATTACTAGTATATGAATACCTCGTTAATGGGAGCCTAGACTGCTTCATTTTTGATCAAATAAAAGGCAAATTATTGGATTGGCCCCGACGTTTCCACATAATTTTTGGAATTGCTAGGGGGCTTTTATATCTTCATCAAGATTCCCGATTAAGAATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATGAAAAGTTAAATCCAAAAATATCAGATTTTGGAATGGCAAGAGCTTTTAAAGGAGACCAAATTGAAGGAAACACAAATAGAGTAGTTGGAACTTATGGATACATGGCTCCAGAATATGCTGTTGATGGGCTATTTTCAATCAAATCGGATGTTTTCAGTTTTGGCATTTTATTGTTAGAGATTATATGTGGGAACAAAAATAGATCTCTTTGTGATGGAAACCAGACTCTTAACCTTGTTGGCTATGCATGGACACTTTGGAAAGAACAGAGTGCTTCACAGTTGATTGACTCAAACATAAAGGACTCATGTGTTATCCCAGAAGTACTGCGATGCATTCATGTGAGTCTCTTGTGTGTGCAACAATACCCAGAGGATAGGCCAAGCATGACGTCGGTAATTCAAATGTTAGGGAGTGAAATGGAACTGGTTGATCCAAAAGAGCCTGGCTTCTTTCCAAGAAGGATTTCAGATGAAAGAAATTTAAGCTCAAATCTAAATCAAACAACTTCAATTGATGATTTCCATAGCAGTAGCAGCCACATCAACCATTTCAGTAACACCCCACAAGGAACCCATGAACTTGGATTTTTCAATCCTGGAAATCCCAACAAAATCTACCTTGGGATTTGGTTCAAGAATATTCCATTTCAAAACATTGTTTGGGTTGCAAATGGTGGCAACCCAATGAATGATTCCTCTGCCATCTTGAAACTAGACAGTTCTAGCAATCTGGTCCTTACACAAAACAACATGACTATTTGGAGCACAAAATATGCAAAGGAAGCACAAAATCCAGTTGTACAGCTCTTGGATTCAGGAAATCTTGTGATAAGAGACCAGAATGGAGCTAATCCACTGACTTATCTGTGGCAAAGCTTTGATTATCCATCTAACACAATGGTGGCAGGAATGAAGATTGGATGGGACCTGAAAAGAAATTTTAGTATTCGCTTCTTTGCTTGGAAGTGTGATAACGATCCAACCCCAGGAGACTTATATTGGGGTGTTGTACTGTACCCTTATCCTGATATCTGTATGATGAAGGGAACCAGCAAGTGCCTCAGAGTTGGACCATGGAATGGGTTGAGCTTCAGTGGCAGGCCAGATATGAAGCTTAATCCTGTTTACCATTACGAGTTTGTCTCCAACAAGGATGAGGTTTATTACAGATGGACTCTCAAGCAGTCTAGTTTAATAACAGAATTGGTAGCTAACCTAACTACACTAGACCTTAATCGTTTTGTATGGTCGCAGACTGATAACTCATGGTCGCTTTTTTCAAGCATGCCAGCAGACTACTGTGATAACTATGGCGTTTGTGGAGCCAACACATATTGCAGGCATTTTGTAACACCAATGTGTGAATGCTTAAAAGGGTTCAAGCCCAAGTATCCTGAAAAGTGGAACTCAATGGAAAGGTCCCAAGGATGTGTCCTGAAAGATCAGTTGACTTGCAGGAATGATGGGTTTCTCCTGGTGGAAGGCTTGAAAGTCCCAGATACTAAAAGTACCTATTTGGATGAGAGTATTGATCTAGAGCTATGCAGAACCAAGTGCTTGAATAATTGTTCATGTATGGCATATACCAATTCAAATATAAGTGGAGCAGGCAGCGGTTGTGATGTGTTTTCAAATCCTGAAGATGGGCAGGGTCTATATATCCGATTGCCTGCTTCAGAATTAGAATCTGGAGAAACATCAACGAAAAGTCAAAACAAGAAAATAACTGAAACATATTTGGATGATTTGGACCTCCCATTGCTTGATTTGTCAACAGTTATGGTTGCTACTAATAATTTCTCAGAGGAGAACAAGAATGGGGAAGGTGGTTTTGGACCTCTATATTGGGGGAAATTACCCAGTGGACAAGAAATTGCGGTAAAGAGACTTTCACAAAAGTCAGAACAAGGAATAACTGAGTTTGTAAATGAAGTAAAACTTATTGCAAAACTTCAGCACTGGAATCTGGTAAAGCTTTTAGGCTGTTGCATTCAGAAGCTAGAAAAAATATTGATTTATGAATACATGGCTAATGATCATACCAAAGGTAAATCACTTGACTGGCCAAAGCGTTTCTGCATAATTTGTGGAATTGCTCGAGGACTTATATATCTTAATCAAGATTCTCGACTAAGGATTGTCCATAGAGATCTCAAAGTAAGTAATATTCTACTAGATTTTGGAATGGCTAGATCTGTTGGAAGAGAGGAGATTGAGGGAAACACAAATAAAATAGTCGGAACATTTGGTTGCATGGCACCAGAATATGCTGTTGATGGGCAATTTTCGGTCAAACAGATAATATGTGGGAAAAGAAACAGAAGACAATATCATAGAATGCAGTATAACCTTGTTGATCATGCTTGGACTCAGTGGAAATTGGACAGGAGTTTACAAATAATTGACCCAAATATTGAGGATTCATTCATTGAATCTGAAATCCTACGTTGTATCCATGTTGGGTTGTTGGGTGTGCAACAATATCCAGAGGATAGAACTCCCATGACTTCAGTGGTTCTAATGTTGGGGAGTGAGATGGAATTGGATGAACCTAAAAGGCCAGGTGTTTTCACGAAGAAGGATTCTGTTGAAGCAAGTACAAGCTCAAGTTGTTCAACCAATGCAATGACTATAAGCTTGCCTGCTCGG 4416 0.397 YTLFVPSLIVFVAADTKFIAQSQSLSYGKTIVSSPRGTFELGFFNVGNPNKIYLGIRYKNIPIQNVVWVANGGNPINDSSATLKLNSSGGLVLTHNNMVVWSTSSSKNAQDPVAELLDSGNLVIREKNEAELEVKEYLWQSFDYPSNTMLAGMKVGWDLKRNLSIRLIAWKSFDDPSPGDLSWGVTLHPYPEIYMMKGTKKYHRVGPWNGLRFSGRPEMADKDPIYHYEFVSNKEEVYYTWTLKQTNLLSKLVLNQTTQERPRYVWSETEKSWMFYTTMPEDYCDRYGVCGANSYCSTSAYPMCQCLKGFVPKSPEKWNSMGWTQGCVLQHPLSCKTDGFALVGGLKVPDTKDTFVDESIDLEQCRTKCLNDCSCMAYTNSNIRGEGSGCVMWFGDLFDIKLYPVLEKGQGLYIRLPPSELDKSKTKENIKRQLKDLDVPLFDLATITAATDSFSLNNKIGQGGFGPVYKGKLVDGREIGVKRLSSRSGQGIVEFITEVKLIAKLQHRNLVKLLGCCIKGQEKLLVYEYLVNGSLDCFIFDQIKGKLLDWPRRFHIIFGIARGLLYLHQDSRLRIIHRDLKASNVLLDEKLNPKISDFGMARAFKGDQIEGNTNRVVGTYGYMAPEYAVDGLFSIKSDVFSFGILLLEIICGNKNRSLCDGNQTLNLVGYAWTLWKEQSASQLIDSNIKDSCVIPEVLRCIHVSLLCVQQYPEDRPSMTSVIQMLGSEMELVDPKEPGFFPRRISDERNLSSNLNQTTSIDDFHSSSSHINHFSNTPQGTHELGFFNPGNPNKIYLGIWFKNIPFQNIVWVANGGNPMNDSSAILKLDSSSNLVLTQNNMTIWSTKYAKEAQNPVVQLLDSGNLVIRDQNGANPLTYLWQSFDYPSNTMVAGMKIGWDLKRNFSIRFFAWKCDNDPTPGDLYWGVVLYPYPDICMMKGTSKCLRVGPWNGLSFSGRPDMKLNPVYHYEFVSNKDEVYYRWTLKQSSLITELVANLTTLDLNRFVWSQTDNSWSLFSSMPADYCDNYGVCGANTYCRHFVTPMCECLKGFKPKYPEKWNSMERSQGCVLKDQLTCRNDGFLLVEGLKVPDTKSTYLDESIDLELCRTKCLNNCSCMAYTNSNISGAGSGCDVFSNPEDGQGLYIRLPASELESGETSTKSQNKKITETYLDDLDLPLLDLSTVMVATNNFSEENKNGEGGFGPLYWGKLPSGQEIAVKRLSQKSEQGITEFVNEVKLIAKLQHWNLVKLLGCCIQKLEKILIYEYMANDHTKGKSLDWPKRFCIICGIARGLIYLNQDSRLRIVHRDLKVSNILLDFGMARSVGREEIEGNTNKIVGTFGCMAPEYAVDGQFSVKQIICGKRNRRQYHRMQYNLVDHAWTQWKLDRSLQIIDPNIEDSFIESEILRCIHVGLLGVQQYPEDRTPMTSVVLMLGSEMELDEPKRPGVFTKKDSVEASTSSSCSTNAMTISLPAR 1472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03795 1472 FunFam Os04g0303100 protein 798 940 - -
Pste1g03795 1472 Pfam D-mannose binding lectin 808 911 IPR001480 -
Pste1g03795 1472 Pfam D-mannose binding lectin 66 171 IPR001480 -
Pste1g03795 1472 SMART blect_4 22 145 IPR001480 -
Pste1g03795 1472 SMART blect_4 765 885 IPR001480 -
Pste1g03795 1472 CDD PAN_AP_plant 1071 1146 - -
Pste1g03795 1472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 575 587 IPR008271 GO:0004672|GO:0006468
Pste1g03795 1472 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 716 - -
Pste1g03795 1472 Gene3D Phosphorylase Kinase; domain 1 418 529 - -
Pste1g03795 1472 Gene3D Phosphorylase Kinase; domain 1 1149 1259 - -
Pste1g03795 1472 CDD STKc_IRAK 460 725 - -
Pste1g03795 1472 FunFam Os04g0303100 protein 57 202 - -
Pste1g03795 1472 CDD PAN_AP_plant 331 417 - -
Pste1g03795 1472 Pfam S-locus glycoprotein domain 944 1052 IPR000858 GO:0048544
Pste1g03795 1472 Pfam S-locus glycoprotein domain 204 314 IPR000858 GO:0048544
Pste1g03795 1472 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1153 1264 - -
Pste1g03795 1472 SUPERFAMILY Protein kinase-like (PK-like) 1172 1431 IPR011009 -
Pste1g03795 1472 ProSiteProfiles PAN/Apple domain profile. 1074 1146 IPR003609 -
Pste1g03795 1472 FunFam cysteine-rich receptor-like protein kinase 10 1256 1437 - -
Pste1g03795 1472 SUPERFAMILY Protein kinase-like (PK-like) 435 725 IPR011009 -
Pste1g03795 1472 Gene3D Transferase(Phosphotransferase) domain 1 530 735 - -
Pste1g03795 1472 Gene3D Transferase(Phosphotransferase) domain 1 1260 1445 - -
Pste1g03795 1472 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 12 142 - -
Pste1g03795 1472 SMART serkin_6 454 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03795 1472 SMART ntp_6 335 416 IPR003609 -
Pste1g03795 1472 SMART ntp_6 1074 1145 IPR003609 -
Pste1g03795 1472 ProSiteProfiles Bulb-type lectin domain profile. 16 137 IPR001480 -
Pste1g03795 1472 Pfam Protein kinase domain 1190 1346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03795 1472 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 530 733 - -
Pste1g03795 1472 Pfam Protein tyrosine and serine/threonine kinase 455 725 IPR001245 GO:0004672|GO:0006468
Pste1g03795 1472 Gene3D - 752 882 IPR036426 -
Pste1g03795 1472 Gene3D - 10 142 IPR036426 -
Pste1g03795 1472 ProSiteProfiles Bulb-type lectin domain profile. 761 879 IPR001480 -
Pste1g03795 1472 Pfam PAN-like domain 1074 1131 IPR003609 -
Pste1g03795 1472 Pfam PAN-like domain 335 400 IPR003609 -
Pste1g03795 1472 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 176 IPR036426 -
Pste1g03795 1472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1302 1314 IPR008271 GO:0004672|GO:0006468
Pste1g03795 1472 ProSiteProfiles PAN/Apple domain profile. 335 417 IPR003609 -
Pste1g03795 1472 ProSiteProfiles Protein kinase domain profile. 1189 1472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03795 1472 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 419 529 - -
Pste1g03795 1472 CDD B_lectin 22 145 IPR001480 -
Pste1g03795 1472 ProSiteProfiles Protein kinase domain profile. 454 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03795 1472 SUPERFAMILY alpha-D-mannose-specific plant lectins 808 916 IPR036426 -
Pste1g03795 1472 CDD B_lectin 776 885 IPR001480 -
Pste1g03795 1472 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 755 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03795 Pste-Chr1 18772131 18783168 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03795 442 762 Receptor kinase-like Gene Family AT3G45860 56.231 1.47e-112 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03795 PK_Tyr_Ser-Thr 3.8e-47 CL0016