Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03791 ATGGCTGTTTTAAGCTCTAACTTTCAAGCTCAGTTCTCAATGAAGTTTATTCCTACTATGCTGAGCATCATCGTTTATATGCTGTTTGTCTCTTCTCATGCAGTTTACATATCACAGTCCCAATCGCTCAGTTTTGATAGGACCATAGTTTCCCCAGGTGGAATCTTTGAACTTGGTTTCTTCAATCTTGGAAATCCAAACAAAAGCTACCTTGGGATTTGGTTCAAGAACATTCCTGTTCAAAACATTGTTTGGGTTGCAAACGGTGGCAATCCAATCAATGATTCCTCAGCCATCTTGAAACTAAACAGTTCTGGAAATTTGGTCCTCACACAAAGCAACATGGTTGTTTGGTACACAAGTTCTGGCAGAAAAGCAGAGGATCCAGTAGCAGAGCTCTTGGATTCTGGCAATCTTGTGATAAGAGAGAAAAATGAAGCAAACACAGAAGAGGAAAAATATCTTTGGCAAAGTTTTGACTATCCTTCTAATACAATGTTGTCAGGAATGAAGATTGGATGGGACATCAAAAGAAATCTCAGTATTCAAGTGACAGCTTGGAAGAGTGATGATGATCCAACCCCAGGAGACTTTTCTTGGGGCATTATTCTGCACCCATATCCTGAGATGTATATGATGCAGGGAACCAAAAAGTACCACAGAATTGGACCATCGAATGGTTTGCGTTTCGCTGGTGACAAGCCAGTAATTAACCATACCATTTTCCATTATGAGTTTGTCTCCAACAAGGAACAGGTTTATTACAGATGGACCCTCCAGCATACTAGTATATTATCAAAAGTGGTACTTAACGAAACCACAATGGAACGTCCTCGTTATGTATTGTCACAGACTGATAAATCATGGATGCTTTATTCAAAAAGGCCAGCAGACTACTGTGATCATTATGGGGTTTGTGGAGCCAATTCATATTGCAGCACTTCTGAATATCCAATGTGTCAGTGTTTAAAAGGGTTCAAGCCTAAGTCTCCTGCAAAATGGGACTCAATGGATTGGTCTCAAGGATGTGTCCTCAAACATCCATTGAGTTGCACGTATGATGGGTTTGCTTATGTGGATCGTCTGAAAGTGCCAGATACTGAAAATACGACTGTGGATGAGACTATTAATCTTGAGGAGTGCAGAACCAAGTGCTTGAATGATTGTTCTTGTATGGCATATACAAATTCTAATTTAAGTGGAGCAGGCAGTGGCTGTGTCTTGTGGTTTGGTGATTTATTTGACATGAAATTATTTGCAGTTGAACAAAATAGTAATTTTCTATATATAAGATTGTATCCGTCAGAATTAGAGAATTTAAATCCAGAAAATAACTATGAAGAGCCTGTCCGTATACATGGACACAACCAAAGGAACATTGCTGATAAGTCAAAGGCAAAAGAGAACACTAAAAGACAGCTAAAAGATCTGGATGTGCCATTGTTCGATCTGCTAACTATCGCTACTGCCACCAACAGTTTCTCCTTGAATAATAAGATAGGACAAGGTGGTTTTGGACCTGTGTATAAGGGAAAATTAGCAGATGGGCGAGAAATTGCAGTCAAGAGACTTTCAAGCAGTTCTGGACAAGGAATAGTTGAGTTCTTAACAGAAGTAAAACTGATTGCAAAGCTCCAACACCGAAATCTTGTAAAACTCCTTGGATGTTGCATTAAAGGAGAAGAAAAATTACTAGTATATGAATATATGGTTAATGGCAGTCTAAACTCCTTCATTTTTGATCAAACAAAAGGTAAATTATTGAATTGGCCCCTACGCTTGGACATAATTTTTAGAATTGCAAGGGGACTTTTGTATCTTCATCAAGATTCCCGATTAAGAATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTCGATGAAAAGTTAAATCCAAAAATATCAGACTTTGGAATGGCAAGAGTATTTGGAGGAGACCAAAATGAAGAAAACACAAATAAAGTAGTTGGGACTTATGGATACATGGCTCCAGAATATGCTCTCCATGGACTATTTTCAATCAAATCAGATGTTTTCAGTTTTGGTATTTTATTGTTAGAGATTATATGTGGGATAAAAAATAGAGCTCTTTGTCATGGGAACGAGTATCTTAACCTTATTGGCCATGCATGGATACTTTGGAAAGAAAAAAATGTTTCACAGTTGATTGACTCAAACATAAAAGAATCATGTGTTATCCCAGAAGTTCTGAGATGCTTTCATGTCAGTCTCTTGTGCGTGCAACAATACCCGGAGGATAGGCCAACCATGACCACAGTAATTCGAATGTTAGAGAGTGAAATGGAACTGGTTGAGCCAAAAGAGCCTGGTTTCTTTCCAAGGATGATTTCAGATGAAAGAAAGTTAAGCTCAAATAAAAATCAAACTACTTCAAATGATGAGTTAACCATTACCTCACTAAATGGCCGCTGAAAATTATTGAGTCTGTTGAACATATTTCACAGGTACATTCAAGACCGACGGATTTTTCTATTTGAAAACCTTTTGAATTGTTCTGATGTATTTGCACAGTTGTGTATAAAATTTATTCACAGAAGTTTAGAAGTGATATTATAGTTCGAACTGAGA 2592 0.3754 MAVLSSNFQAQFSMKFIPTMLSIIVYMLFVSSHAVYISQSQSLSFDRTIVSPGGIFELGFFNLGNPNKSYLGIWFKNIPVQNIVWVANGGNPINDSSAILKLNSSGNLVLTQSNMVVWYTSSGRKAEDPVAELLDSGNLVIREKNEANTEEEKYLWQSFDYPSNTMLSGMKIGWDIKRNLSIQVTAWKSDDDPTPGDFSWGIILHPYPEMYMMQGTKKYHRIGPSNGLRFAGDKPVINHTIFHYEFVSNKEQVYYRWTLQHTSILSKVVLNETTMERPRYVLSQTDKSWMLYSKRPADYCDHYGVCGANSYCSTSEYPMCQCLKGFKPKSPAKWDSMDWSQGCVLKHPLSCTYDGFAYVDRLKVPDTENTTVDETINLEECRTKCLNDCSCMAYTNSNLSGAGSGCVLWFGDLFDMKLFAVEQNSNFLYIRLYPSELENLNPENNYEEPVRIHGHNQRNIADKSKAKENTKRQLKDLDVPLFDLLTIATATNSFSLNNKIGQGGFGPVYKGKLADGREIAVKRLSSSSGQGIVEFLTEVKLIAKLQHRNLVKLLGCCIKGEEKLLVYEYMVNGSLNSFIFDQTKGKLLNWPLRLDIIFRIARGLLYLHQDSRLRIIHRDLKASNVLLDEKLNPKISDFGMARVFGGDQNEENTNKVVGTYGYMAPEYALHGLFSIKSDVFSFGILLLEIICGIKNRALCHGNEYLNLIGHAWILWKEKNVSQLIDSNIKESCVIPEVLRCFHVSLLCVQQYPEDRPTMTTVIRMLESEMELVEPKEPGFFPRMISDERKLSSNKNQTTSNDELTITSLNGR 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03791 811 SMART serkin_6 494 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03791 811 Pfam Protein tyrosine and serine/threonine kinase 495 765 IPR001245 GO:0004672|GO:0006468
Pste1g03791 811 MobiDBLite consensus disorder prediction 790 811 - -
Pste1g03791 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 570 773 - -
Pste1g03791 811 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 24 756 - -
Pste1g03791 811 CDD PAN_AP_plant 347 432 - -
Pste1g03791 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 30 159 - -
Pste1g03791 811 Gene3D - 28 159 IPR036426 -
Pste1g03791 811 ProSiteProfiles Bulb-type lectin domain profile. 34 154 IPR001480 -
Pste1g03791 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Pste1g03791 811 SUPERFAMILY Protein kinase-like (PK-like) 477 766 IPR011009 -
Pste1g03791 811 SMART blect_4 40 162 IPR001480 -
Pste1g03791 811 CDD STKc_IRAK 500 766 - -
Pste1g03791 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 457 569 - -
Pste1g03791 811 Pfam S-locus glycoprotein domain 221 330 IPR000858 GO:0048544
Pste1g03791 811 SMART ntp_6 351 432 IPR003609 -
Pste1g03791 811 Pfam D-mannose binding lectin 83 188 IPR001480 -
Pste1g03791 811 PIRSF SRK 7 811 IPR024171 GO:0004674
Pste1g03791 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 193 IPR036426 -
Pste1g03791 811 ProSiteProfiles Protein kinase domain profile. 494 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03791 811 Pfam PAN-like domain 351 416 IPR003609 -
Pste1g03791 811 Gene3D Transferase(Phosphotransferase) domain 1 570 776 - -
Pste1g03791 811 CDD B_lectin 40 162 IPR001480 -
Pste1g03791 811 Gene3D Phosphorylase Kinase; domain 1 454 569 - -
Pste1g03791 811 ProSiteProfiles PAN/Apple domain profile. 351 432 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03791 Pste-Chr1 18749084 18752938 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03791 482 811 Receptor kinase-like Gene Family AT4G23140 54.971 1.42e-118 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03791 PK_Tyr_Ser-Thr 1.1e-50 CL0016