Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03788 TTTTCTTAATCTTAAATATGGCTGTTTTGTGCTCTAACTTTCAAGCTCAGTACTCAATGAAGTTTATTCCTACTATGCTGAGCACCATCGTTTATATGCTGTTTGTCTCTTCTCATGCAGTTTCCATATCACAGTCCCAATCACTCAGTTTTGGGAAGACCATAGTTTCCCCAGGTGGAATCTTTGAACTTGGTTTCTTCAATCTTGGAAATCCAAACAAAAGCTACCTTGGGATTTGGTTCAAGAACATTCCTGTTCAAAACATTGTTTGGGTTGCAAACGGTGGCAATCCAATCAATGATTCCTCAGCCATCTTGAAACTAAACAGTTCTGGCAATTTGGTTCTCATACACAACAATATGGATGTTTGGTCCACAAGTTCTCCAAAAAAGGCACAGGATCCAGTGGCAGAGCTCTTGGATTCAGGCAATCTTGTGATAAGAGAGAAAAATGAATCAAATCCAGAAGAGAACGAATATCTGTGGCAAAGTTTTGACTACCCTTCTAATACAGTGCTGTCAGAAATGAAGATTGGATGGGACCTCAAAAGAAATCTCAGTATTCACCTAACAGCTTGGAAGAGTGATGATGATCCAACCCCAGGAGACTTAACTTGGGGCATTACTCTGCACCCATATCCTGAGATGTATATGATGCAGGGAACCAAAAAGTACCACAGACTTGGACCATGGAATGGTTTGACTTTTTCTAATGACGGATCAGAAATTATCAAAACCATTTATGACTATGAGTTTGTCTCCAACAAGGAAGAGATTTATTACAGATGGACCCTCCAGCATACTAGTATGTTATCAAAAGTGGTACTTAACGAAACCACACTGGAACGTCCTCGTTATGTATTGTCAGAGACTGATAAATCATGGATGCTTTATTCAAAAAGGCCAGCTGACTACTGTGACCATTATGGGGTTTGTGGAGCCAATTCATATTGCAGCACCTCTGTATATCCAATGTGTCAGTGTTTAAAAGGGTTCAAGCCTAAGTCTCCTGAAAAATGGAACTCAATGGACTTCACCAAAGGATGTGTCCTAAAACATCCACTGAGTTGCATGTATGATGGGTTTGCTTATGTGGAACGGCCGAAAGTGCCAGATACTGAAAATACGACTGTGGATGAGTTTATTGATCTCGAGGACTGCAGAACCAAGTGCTTGAATGATTGTTCATGTATGGCATATACAAATTCTAATTTAAGTGGAGCAGGAAGTGGCTGTGTCTTGTGGTTTGGTGATTTATTTGGCATCAAACTGTTTCCAATTGAAGATAGAGGGCAGGGTCTATATATAAGATTGCATTCTTCAGAATTAGAGAAGTCAAATGAAGAAAATAACGATGAAGAGCCTCTGCCTCAATATGGACACATCCGAAGGAACATTGCTGATGAGTCAAAGGCAAAAGAGAACACTGAAAAACAGCTAAAAGATCTGGATTTGCCATTATTCGATCTGCTAATAATCTCTACTGCCACCAACAATTTCTCGTTGAATAATAAGATTGGACAAGGTGGTTTTGGACCTGTGTACAAGGGAAAATTAGCAGATGGGCGAGAAATTGCAGTCAAGAGACTTTCAAGCAACTCTGGACAAGGAATAGTTGAGTTCTTAACAGAAGTAAAGCTGATTGCAAAGCTCCATCACCGAAATCTTGTAAAACTTCTAGGATGTTGCATTAAAGGAGAAGAAAAATTACTAGTATATGAATACATGGTTAATGGCAGCCTAAACTCCTTCGTTTTTGATCAAATAAAAGGTAAATTATTGGATTGGCCCTTACGCTTGGACATAATTTTTGGAATTGCAAGGGGACTTTTGTATCTTCATCAAGATTTCCGATTAAGAATTATTCATAGAAATCTCAAAACAAGTAATGTTTTACTTGATGAAAAGTTAAATCCAAAAATATCAGACTTTGAAATGGCAAGAGCATTTGGAGGAGACCAAACTGAAGGAAATACAAACAGAGTAGTTGGAACTTATGGATACATGGCTCCAGAATATTTTGTTCATGGATTATTTTCAAACAAATCAAATATTATATGTGGGATAAAAAATAGAGCTTTGTCATGGGAACGAGCATGGATACTTTGGAAAGAAAAAAATGTTTCACAGTTGATTGACTCAAACATAAAGGAATCATGTGTTATCCCAGAAGTTCTAAGATGCTTTCATGTCAGTCTCTTGTGCGTGCAACAATACCCGGAGGATAGGCCAACCATGACCACAGTAATTCAAATGTTAGAGAGTGAAATGGAACTGGTTGAGCCAAAAGAGCCTGGTTTCTTTCCAACGATAATTTCATATGAAAGAAAATTAAGCTCAAATCTAAAGCAAACTACTTCAAATGATGAAATTTCTGCAGCTACCCTCAATGTGTCAGAGTCTATCAATGAAGGCAAGAGCTTAGTTAGCGGGTTGTTTGAGCTTGGCTTCTTCAGCCCTGGCAATTCCATAAAACGTTACCTTGGAATTTGGTATAAAAATATTCCAAATGATAGCGTTGTTTGGGTCGCAAATGATGCAAACCCGATTAATGATTCCTCAGGCATCTTAACATTCAGCAGCACAGGCTATCTTGAGCTCAGACAAAAGGACACCGTAGTTTGGTCTGCAACCTATCAAAAACTAGCACTGAATCCGGTGGCAGAGTTGTTGGACAGTGGCAATCTTGTGGTAAGAAACGAGGGAGACACAGACCCAGAAGGGTACATGTGGCAAAGCTTTGATTATCCTTCTGATACACTCTTGCCAGGGATGAAGTTGGGATGGGACCTCAGAAACGGTTTTGAAAGGAAAATAACGGCTTGGAAGAGTCCAAATGATCCATCCCCTGGAGATTTTTCTTTGGCTCTAATTCTCCATCGCTATCCCGAGTTTTATCTAATGCATGGAATACAGAAGTACTCCCTCGTAGGACCGTGGAATGGACTTCATTTCAGTAGTGTATCAAATGACTCAAATCAAAATCCAAATTCAGTGTATGAGTTGAAATTCGTGGTTGAAAATGATCTCAGGTTGAGATGTTCTTGGTTGGATGAGAATATTGATTTAGATGTATGCTTAGAAAAGTGCTTGAATAATTGTTCTTGCATGGCCTATACTAATTCTGACATACGAGGACGTGGCAGTGGTTGTGTGCTTTGGTTTAACGACCTAATTGACATTGGACAGTTTGAATCTGGTGGCCAAGATCTATATTTCCAATCCATCCTTCTGTTTCATAATGTTATTGAACTGAATTCCTTTTCTCCGGTTCCAGATAAGTCAAGGACAAAAGAGACCCTCAAAAGACAGCTACAAGATCTCGATAATCCAGAGATTATTATTGTTACACAAAGCATATTTTCAAACGAAGGCATTATACAGGGAAAGTTAGTGGATGGGCAAGAAATAGCAGTCAAGAAACTTTCTAGTAGGTCTGGACAAGGAATAGTCGAATTCATAACAGAAGTAAAATTGATTGCAAAGCTTCAACACCGAAATCTGGTAAAACTTCTTGGTTGTTGCAATAAAGGACAAGAAAAATTACTGGTATATGAATACATGGTTAATGGCAGCCTAGACTCCTTCATTTTTGATAAAATAAAAGGTATATTATTGGATTGGCCCCTACGCTTGGACATAATTTTTGGAATTGGTAGGGGACTTTTGTATCTTCATCAAGATTTCCGATTAAGAATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATGGAAGATTAAAACCTAAAATATCAGATTTTGGAATGGCAAGAGCATTTGGAGGAGACCAAATTGAAGGAAACACAAATAAAGTAGAAGGGACTTGTGGATACATGGCTCCAGAATATGCTGTTGATGGATTATTTTCAATCAAATCAGATGTTTTCAGTTTTGAGATTATATGTGGGAACAAAAACAGAGCTCTTTGTCATGGAAACCAAACTCTTAACCTTGTTGAAGAAAATGTTGCACAGTTGATTGACTCAAACATAAAGGAATCATGTGTTATCCAAGAAGTACTGAGATGCATTCATGTCAGTCTGTTGTGCGTGCAACAATATCCAGAGGATATGCCAACCATGACCACAGTAATTCAAATGTTAGGGAGTGAAATGGAACTGGTTGAGCCAAAAGAGTCTGGTTTCTTTCCAAGGATGATTTCAAATGAAAGAAAATTAAGCTCAAATCTAAATCAAGCTACTTCAAATTATGAGTTAACCATTACCTCATTAAATGGCCTC 4247 0.3824 MAVLCSNFQAQYSMKFIPTMLSTIVYMLFVSSHAVSISQSQSLSFGKTIVSPGGIFELGFFNLGNPNKSYLGIWFKNIPVQNIVWVANGGNPINDSSAILKLNSSGNLVLIHNNMDVWSTSSPKKAQDPVAELLDSGNLVIREKNESNPEENEYLWQSFDYPSNTVLSEMKIGWDLKRNLSIHLTAWKSDDDPTPGDLTWGITLHPYPEMYMMQGTKKYHRLGPWNGLTFSNDGSEIIKTIYDYEFVSNKEEIYYRWTLQHTSMLSKVVLNETTLERPRYVLSETDKSWMLYSKRPADYCDHYGVCGANSYCSTSVYPMCQCLKGFKPKSPEKWNSMDFTKGCVLKHPLSCMYDGFAYVERPKVPDTENTTVDEFIDLEDCRTKCLNDCSCMAYTNSNLSGAGSGCVLWFGDLFGIKLFPIEDRGQGLYIRLHSSELEKSNEENNDEEPLPQYGHIRRNIADESKAKENTEKQLKDLDLPLFDLLIISTATNNFSLNNKIGQGGFGPVYKGKLADGREIAVKRLSSNSGQGIVEFLTEVKLIAKLHHRNLVKLLGCCIKGEEKLLVYEYMVNGSLNSFVFDQIKGKLLDWPLRLDIIFGIARGLLYLHQDFRLRIIHRNLKTSNVLLDEKLNPKISDFEMARAFGGDQTEGNTNRVVGTYGYMAPEYFVHGLFSNKSNIICGIKNRALSWERAWILWKEKNVSQLIDSNIKESCVIPEVLRCFHVSLLCVQQYPEDRPTMTTVIQMLESEMELVEPKEPGFFPTIISYERKLSSNLKQTTSNDEISAATLNVSESINEGKSLVSGLFELGFFSPGNSIKRYLGIWYKNIPNDSVVWVANDANPINDSSGILTFSSTGYLELRQKDTVVWSATYQKLALNPVAELLDSGNLVVRNEGDTDPEGYMWQSFDYPSDTLLPGMKLGWDLRNGFERKITAWKSPNDPSPGDFSLALILHRYPEFYLMHGIQKYSLVGPWNGLHFSSVSNDSNQNPNSVYELKFVVENDLRLRCSWLDENIDLDVCLEKCLNNCSCMAYTNSDIRGRGSGCVLWFNDLIDIGQFESGGQDLYFQSILLFHNVIELNSFSPVPDKSRTKETLKRQLQDLDNPEIIIVTQSIFSNEGIIQGKLVDGQEIAVKKLSSRSGQGIVEFITEVKLIAKLQHRNLVKLLGCCNKGQEKLLVYEYMVNGSLDSFIFDKIKGILLDWPLRLDIIFGIGRGLLYLHQDFRLRIIHRDLKASNVLLDGRLKPKISDFGMARAFGGDQIEGNTNKVEGTCGYMAPEYAVDGLFSIKSDVFSFEIICGNKNRALCHGNQTLNLVEENVAQLIDSNIKESCVIQEVLRCIHVSLLCVQQYPEDMPTMTTVIQMLGSEMELVEPKESGFFPRMISNERKLSSNLNQATSNYELTITSLNGL 1410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03788 1410 CDD PAN_AP_plant 1009 1067 - -
Pste1g03788 1410 ProSiteProfiles PAN/Apple domain profile. 993 1071 IPR003609 -
Pste1g03788 1410 SMART blect_4 40 162 IPR001480 -
Pste1g03788 1410 SMART blect_4 793 911 IPR001480 -
Pste1g03788 1410 CDD PAN_AP_plant 347 432 - -
Pste1g03788 1410 Gene3D Phosphorylase Kinase; domain 1 455 569 - -
Pste1g03788 1410 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 784 908 - -
Pste1g03788 1410 Pfam PAN-like domain 353 414 IPR003609 -
Pste1g03788 1410 Pfam PAN-like domain 1009 1055 IPR003609 -
Pste1g03788 1410 SUPERFAMILY Protein kinase-like (PK-like) 1124 1386 IPR011009 -
Pste1g03788 1410 SMART serkin_6 1115 1371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03788 1410 SMART serkin_6 494 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03788 1410 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 30 159 - -
Pste1g03788 1410 ProSiteProfiles PAN/Apple domain profile. 351 433 IPR003609 -
Pste1g03788 1410 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 570 755 - -
Pste1g03788 1410 Pfam Protein tyrosine and serine/threonine kinase 495 746 IPR001245 GO:0004672|GO:0006468
Pste1g03788 1410 Pfam Protein tyrosine and serine/threonine kinase 1127 1364 IPR001245 GO:0004672|GO:0006468
Pste1g03788 1410 ProSiteProfiles Protein kinase domain profile. 494 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03788 1410 ProSiteProfiles Bulb-type lectin domain profile. 34 154 IPR001480 -
Pste1g03788 1410 SMART ntp_6 351 432 IPR003609 -
Pste1g03788 1410 SMART ntp_6 993 1069 IPR003609 -
Pste1g03788 1410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1227 1239 IPR008271 GO:0004672|GO:0006468
Pste1g03788 1410 ProSiteProfiles Bulb-type lectin domain profile. 787 905 IPR001480 -
Pste1g03788 1410 CDD B_lectin 793 911 IPR001480 -
Pste1g03788 1410 CDD B_lectin 40 162 IPR001480 -
Pste1g03788 1410 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 458 569 - -
Pste1g03788 1410 FunFam Os04g0303100 protein 824 968 - -
Pste1g03788 1410 Gene3D Transferase(Phosphotransferase) domain 1 570 758 - -
Pste1g03788 1410 Gene3D Transferase(Phosphotransferase) domain 1 1182 1376 - -
Pste1g03788 1410 SUPERFAMILY alpha-D-mannose-specific plant lectins 834 942 IPR036426 -
Pste1g03788 1410 ProSiteProfiles Protein kinase domain profile. 1071 1371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03788 1410 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1182 1372 - -
Pste1g03788 1410 Pfam D-mannose binding lectin 834 937 IPR001480 -
Pste1g03788 1410 Pfam D-mannose binding lectin 83 188 IPR001480 -
Pste1g03788 1410 FunFam Os04g0303100 protein 73 219 - -
Pste1g03788 1410 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 193 IPR036426 -
Pste1g03788 1410 FunFam Uncharacterized protein 1114 1181 - -
Pste1g03788 1410 Gene3D Phosphorylase Kinase; domain 1 1093 1181 - -
Pste1g03788 1410 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 25 738 - -
Pste1g03788 1410 Gene3D - 783 908 IPR036426 -
Pste1g03788 1410 Gene3D - 27 159 IPR036426 -
Pste1g03788 1410 Pfam S-locus glycoprotein domain 221 330 IPR000858 GO:0048544
Pste1g03788 1410 SUPERFAMILY Protein kinase-like (PK-like) 478 748 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03788 Pste-Chr1 18725592 18736929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03788 482 780 Receptor kinase-like Gene Family AT4G23140 52.160 2.68e-95 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03788 PK_Tyr_Ser-Thr 1.1e-36 CL0016