Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03767 ATGAATTCGCTATTCTCAAATGAAAAGCTTCCCCCACCGCCGGGAATCCCAATCCCAGGCGCAGTCGCGGCCGAAACGGCGATCCCAAACCCAATACTAATCCCGAAGCTGGAACCTTTCGATGGATGGCTGAGTAGCCACAGACCCGAACAGCAACGAGAAGAAGAAGAATCAGAACAATCTCAATCTCAGGAGGCCAATTTTTCAAATGGGTCAATCGACATCGACCTGAATCTCTTGTGCGAGCAAACCCCCGAAGACCCAAACTTGTTGTCGGAGTTCAACAGAATCTCCCAGCTCTTCTGCACCGCTTTCTCCAGCACGGCGGCGCAAAACGACGGCATGGCCTCGGGCCTGCAGCAGCACTTGGGCCTTCCGGACCCGGATTCACGGGCAATTGTGGCTGTCCCGGAGGAGGGTCGGTCGTCGTCGATGGCGGTGGCGACGACGGGGCGGCGGCGGTGCAAGGAGCTGGTCCGGGTGACCGACATCGGGGGGCCGGAGCATCGGCAGTTCCGGGACGTGGTGCGGCGGACTCGGATGGTGTACGACTCCCTGCGGGTGCTGGCGAGCGTGGAGGACGAGCGGCGGATGGATGCCCGGCGGGGGCGCGGCGATTTGCGTGCCTCGGCGGTGATGAGGAGCTGTGGGCTTTGGTTGAACCGTGATAAGAGAATTGTGGGTGCCATTCCTGGTGTTTGCATTGGTGATGTTTTCCTTTATAGAATGGAGTTGTGTGTGGTAGGTTTGCACGGTCAGCCTCAGGCTGGGATTGATTATCTCCCTGCTAGCATGAGTTCCAATGGTGAACCTATTGCCACTAGTGTCATTGTTTCTGGTGGGTATGAGGATGATGTTGATGAGGGTGATGTTATCATTTACTCTGGCCACGGTGGCCAGGACAAGCATTCTAAGCAGGTTTTTCACCAGAAGCTTGAGGGAGGCAACCTTGCTATGGAGAGGAGTATGCATTATGGGATTGAGGTCAGGGTTATTCGCGGTGTCCGCTATGAGGGTGCTGCCTCTGCCACTGGCAAGTTGTATGTGTATGATGGCTTGTATAGGATTCTTGAGTGCTGGTTTGATGTTGGCAAGTCCGGTTTTGGTGTTTATAAGTATAAGCTCTGTAGGATTGATGGGCAGGCCAAGATGGGTACCCTCGTGCTCAAGGAGGCCCTTATGCTTAGGAGGGATCCCTTGAGTTCCAAACCCATGTACTGTTTGTCTCTTGATATTTCCAATAGGACCGAGAATGTTGGGGTGCGCCTTTTTAATGACATTGATCGTAACTATGACCCTTTGCGCTATGATTATCTTGTCAAGACCAATTTTCCACAGTTTGTGTTTCATCAGAGTGGGAGGGGGACCGGTTGTGACTGTGTGGATGGCTGTGTTGAGGGATGCTTTTGTGCTATCAAGAATGGAGGGGACCTTCCTTATAATCAGACTGGGATTCTCTTGAAGGGGAAGCCTTTGATTTTTGAGTGTGGTCCATTTTGTAGTTGTCCTCCTCATTGTCGCAACCGTGTCACGCAAAAGGGGCTGAAAAATAGGTTGGAAGTGTTTAGATCTAGGGAAACTGGTTGGGGAGTTAGGTCCTTGGACCTTATTCAAGCTGGTGCTTTTATATGTGAGTACACAGGGGTTGTTCTCACTAGGGAGCAAGCTGAACTTTTGACAATGAATGGTGATTCATTGATATATCCAAATCGCTTTACTGATAGGTGGACAGAATGGGGGGACTTATCTATGATAGATTCCAATTATGTGCGTCCATCTTATCCGTCAATCCCTCCTTTGGATTTTGCGATGGATGTGTCAAGAATGAGGAATGTTGCTTGCTATATGAGTCATAGTACAACTCCCAATGTGTTGGTTCAGTTTGTTCTGTATGATCACAATAATTTGATGTTCCCTCACCTTATGCTATTTGCAATGGAGAACATCCCTCCTATGAGAGAGCTTAGCCTTGATTATGGGGTAGCTGATGAGTGGACAGGGAAGCTCTCTATATGTAACTGA 2022 0.5035 MNSLFSNEKLPPPPGIPIPGAVAAETAIPNPILIPKLEPFDGWLSSHRPEQQREEEESEQSQSQEANFSNGSIDIDLNLLCEQTPEDPNLLSEFNRISQLFCTAFSSTAAQNDGMASGLQQHLGLPDPDSRAIVAVPEEGRSSSMAVATTGRRRCKELVRVTDIGGPEHRQFRDVVRRTRMVYDSLRVLASVEDERRMDARRGRGDLRASAVMRSCGLWLNRDKRIVGAIPGVCIGDVFLYRMELCVVGLHGQPQAGIDYLPASMSSNGEPIATSVIVSGGYEDDVDEGDVIIYSGHGGQDKHSKQVFHQKLEGGNLAMERSMHYGIEVRVIRGVRYEGAASATGKLYVYDGLYRILECWFDVGKSGFGVYKYKLCRIDGQAKMGTLVLKEALMLRRDPLSSKPMYCLSLDISNRTENVGVRLFNDIDRNYDPLRYDYLVKTNFPQFVFHQSGRGTGCDCVDGCVEGCFCAIKNGGDLPYNQTGILLKGKPLIFECGPFCSCPPHCRNRVTQKGLKNRLEVFRSRETGWGVRSLDLIQAGAFICEYTGVVLTREQAELLTMNGDSLIYPNRFTDRWTEWGDLSMIDSNYVRPSYPSIPPLDFAMDVSRMRNVACYMSHSTTPNVLVQFVLYDHNNLMFPHLMLFAMENIPPMRELSLDYGVADEWTGKLSICN 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03767 673 SMART set_7 517 666 IPR001214 GO:0005515
Pste1g03767 673 ProSiteProfiles YDG domain profile. 228 377 IPR003105 -
Pste1g03767 673 SUPERFAMILY SET domain 401 672 IPR046341 -
Pste1g03767 673 Gene3D SET domain 387 673 IPR046341 -
Pste1g03767 673 Pfam SET domain 528 660 IPR001214 GO:0005515
Pste1g03767 673 ProSiteProfiles SET domain profile. 517 660 IPR001214 GO:0005515
Pste1g03767 673 Pfam Pre-SET motif 412 509 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste1g03767 673 MobiDBLite consensus disorder prediction 41 69 - -
Pste1g03767 673 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 80 673 IPR025794 GO:0016571
Pste1g03767 673 MobiDBLite consensus disorder prediction 1 21 - -
Pste1g03767 673 Pfam SAD/SRA domain 227 381 IPR003105 -
Pste1g03767 673 SMART G9a_1 223 381 IPR003105 -
Pste1g03767 673 ProSiteProfiles Pre-SET domain profile. 456 514 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste1g03767 673 SUPERFAMILY PUA domain-like 209 390 IPR015947 -
Pste1g03767 673 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 68 661 - -
Pste1g03767 673 SMART preset_2 409 501 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste1g03767 673 Gene3D - 225 386 IPR036987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03767 Pste-Chr1 18517331 18519352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03767 173 662 Su(var)3-9 homologs AT5G04940 39.113 4.89e-105 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste1g03767 SAD_SRA 1.7e-47 CL0178