Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03762 CAAAGGAAAAAAATAATGAGAGGGTCGCGTATAGAAAAAAATGTGTTGAAGAAAGGATCATGGAGTGCTGAGGAAGACAAGAAGTTAATCGATTATATCACTAGATATGGCCACTGGAATTGGCAATTACTCCCCAAGTTTGCAGGTCTTGAAAGATGTGGAAAAAGTTGCAGACTTAGGTGGCTGAATTACCTAAGGCCCAACCTTAAAAGAGGGAACTACACTCAACAAGAGGAGGAAATTATTATCAAGCTTCACCAAGATTGCGGTAGCAGGCCATTGTATGTGTCCCCCATGAATGTTTTCATCTTCCAGTGCCCTCAACTACCGTTCTCTCTCTTCACAATAATTTCAATTCCACTGTTATCTCTTTTTTCAATGGCTTCCACGATTCTTGTTTCTATCACAACGAACAAATTCTCGCCGCCGCAGCCATGGTCTGCCATAGCAGCTTATCTGCCAGGAAGAACAGATAATGATATAAAAAATCATTGGCACACCAACCTCAAGAACAGGTCACAACAGGATTCAGTCACAAAACCTCAACCTTCCAACTCAAAACACCAATCTCCAACTGCAAACCCATTCCAAAGCATTCATACAACACAAGATTCCTGTTTATTTTCCTCGCATTCATCCTCCTCCACCTGCACTGACTGTAGCACCGTTACCAGTGTTGGCAGCAAAGAAAATCTGGTTCTGCATGATGGATTTGACTTTTCGGATGCAGAAAAGGATCTTATAAGTGGAAACTTCGAGTTAGAACCGTATGTTCTTGATAGTTCATACATCTCTACTGAACCTGAGTGCTTTGGCCCAGTCTTTGACGCTGAACTTTGGAGTTATGATGAAACCATGCAAGAATATTGCTCTCCATTTCCCCAACATTATTCATTCTCCTCCACAAGCATCGACGATACCAATCTTACCACCAAAGAAAATCTGATTCCGGGAGATGAATTTGCGTTTTGTGATGCTGACACAGATCTTATGAGTGAAAACTTCTTGTTGGAACCACATGGATCCTATGAGTGGAAACTTCTGAACTTTGGATTTATGATAACAATATGCAAGATTTCTTCCCATTTTCCTAGCATTGATCCTACTCCGAAAGAAAAGAGAGTATACCACTGTTATTACCAGCAACTAATATATGCAGCTTCTGCAAGA 1170 0.4094 QRKKIMRGSRIEKNVLKKGSWSAEEDKKLIDYITRYGHWNWQLLPKFAGLERCGKSCRLRWLNYLRPNLKRGNYTQQEEEIIIKLHQDCGSRPLYVSPMNVFIFQCPQLPFSLFTIISIPLLSLFSMASTILVSITTNKFSPPQPWSAIAAYLPGRTDNDIKNHWHTNLKNRSQQDSVTKPQPSNSKHQSPTANPFQSIHTTQDSCLFSSHSSSSTCTDCSTVTSVGSKENLVLHDGFDFSDAEKDLISGNFELEPYVLDSSYISTEPECFGPVFDAELWSYDETMQEYCSPFPQHYSFSSTSIDDTNLTTKENLIPGDEFAFCDADTDLMSENFLLEPHGSYEWKLLNFGFMITICKISSHFPSIDPTPKEKRVYHCYYQQLIYAASAR 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03762 390 PANTHER MYB DOMAIN PROTEIN 55 12 223 - -
Pste1g03762 390 CDD SANT 20 65 IPR001005 -
Pste1g03762 390 ProSiteProfiles Myb-like domain profile. 66 169 IPR001005 -
Pste1g03762 390 CDD SANT 146 169 IPR001005 -
Pste1g03762 390 MobiDBLite consensus disorder prediction 169 195 - -
Pste1g03762 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 69 IPR017930 -
Pste1g03762 390 MobiDBLite consensus disorder prediction 170 195 - -
Pste1g03762 390 SMART sant 17 67 IPR001005 -
Pste1g03762 390 SMART sant 70 171 IPR001005 -
Pste1g03762 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 146 173 IPR017930 -
Pste1g03762 390 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Pste1g03762 390 Pfam Myb-like DNA-binding domain 145 168 IPR001005 -
Pste1g03762 390 SUPERFAMILY Homeodomain-like 138 179 IPR009057 -
Pste1g03762 390 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Pste1g03762 390 Gene3D - 17 70 - -
Pste1g03762 390 Gene3D - 73 172 - -
Pste1g03762 390 FunFam MYB-related transcription factor 17 70 - -
Pste1g03762 390 SUPERFAMILY Homeodomain-like 19 92 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03762 Pste-Chr1 18470823 18484077 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03762 12 172 MYB Transcription Factor Family AT1G06180 47.826 3.59e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste1g03762 Myb_DNA-binding 1.1e-12 CL0123