Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03761 TCCTATTACGCATTTTTCTTATTTTTGATCTACTTTATGGTTATTATATACTTATAAAAATAATATAATTAATTAAAGCAGAGATTGTTGTAGAGAGAAATGGTGAGAAGCCCATGCATAGAGAAAAATGGATTGAAGAAAGGAGCATGGACCAAAGAGGAAGACAAGAAGTTAATCGATTATATTACTAGATATGGCCACTGGAACTGGCAATTGCTCCCCAAGTTTGCAGGTCTTGAAAGATGTGGAAAGAGTTGCAGACTTAGGTGGCTGAATTACCTAAGGCCAAACCTCAAAAGAGGGAACTACACTCAACAAGAAGACGAAACTATTATCAAGTTGCACAGAAATCTGGGTAGCAGATGGTCAGTGATAGCAGCCCAGCTTCCAGGAAGATCAGATAATGAAATAAAGAACCATTGGAACACCAACCTGAAGAAGCGTTCACAACAGGACTCAAATCCTTTCCAAAGCCTTCATACCTCACAAGATTTATCTCCATCCTCTTCCACAACCACAGAGTATATCACTGTCAGCAACAAAGAAAATCTGGTGACAGAAGATGAATGTGCCTTTTGGGATGCAGACATTGATCTTATGAGTAGAAACTTCTCGTTAGAAACTTATATGCTTAATATTTCCTATGTCCCTGATGAAACTGACCACTTTAGCCAAGTTGAACTTTGGAGTAATGATATATAACACCAGGCAAGCTTCCTCAACTTTTCATGGAATTCCCATCCTCCAGCACAAGCAGAGTATGAAAATTTCGTTCTGGAACAGTACAACACTGTTGCAGCAACCAAAATCTAGTTTTAGAAGATGAGTTTGCGTTTTGGAATAATAAAATACAATTATAATGCCGA 866 0.3788 MVRSPCIEKNGLKKGAWTKEEDKKLIDYITRYGHWNWQLLPKFAGLERCGKSCRLRWLNYLRPNLKRGNYTQQEDETIIKLHRNLGSRWSVIAAQLPGRSDNEIKNHWNTNLKKRSQQDSNPFQSLHTSQDLSPSSSTTTEYITVSNKENLVTEDECAFWDADIDLMSRNFSLETYMLNISYVPDETDHFSQVELWSNDI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03761 200 CDD SANT 69 112 IPR001005 -
Pste1g03761 200 Gene3D - 69 138 - -
Pste1g03761 200 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pste1g03761 200 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pste1g03761 200 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste1g03761 200 CDD SANT 16 61 IPR001005 -
Pste1g03761 200 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 141 - -
Pste1g03761 200 SMART sant 66 114 IPR001005 -
Pste1g03761 200 SMART sant 13 63 IPR001005 -
Pste1g03761 200 MobiDBLite consensus disorder prediction 115 140 - -
Pste1g03761 200 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste1g03761 200 Gene3D - 13 66 - -
Pste1g03761 200 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pste1g03761 200 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pste1g03761 200 FunFam MYB-related transcription factor 13 66 - -
Pste1g03761 200 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03761 Pste-Chr1 18468944 18470119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03761 1 115 MYB Transcription Factor Family AT4G21440 67.826 1.26e-57 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste1g03761 Myb_DNA-binding 1.4e-13 CL0123