Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03758 AGGCAACAGTATGTAGAGATTGAACAAATTGTAACATATAACAAATATGTTGGGTCCAAAATTTTCAAGTCTTCCAAATGATCATCTAGTAGGGATGCAATCTCGTATTGAAGAATTAGAAAAGTTTTTATGTTTTGAGTCAGTTAATGATGTTCGAGTTGTTGGAACTACTAGGATGAGTGGAATGGGAAAGACAACTCTTGTTCGTGCTTTATATGAAAGAGTCTCTCATCATAATTTCCAGGGATGAACATATATTGAAGACACATGGAGTAGATGATGTTTACCGCGTACAAGCATTGGATTTTAAGGATGCTGTTCAGTTGTTTTGCAGAAAAGTTTTCAGAAGTAATTATATTATGAGTGATTATAAAGGGTTGGTACATGATGTACTCTGACATGCTCAAGGCCACCCATTAGCTATTGAAGTAATGGGCTCATCTTTGTTTGGTCACAATATCTTAGAGTGGAGAAGTGCTTTAGCTAGCGTAAGAAAAAATAAAAGTAAGGATATTATGGATGTACTGCGGCAAAGCTTTGATCAGTTGGAAAACATGGACAAAGAAATATTCTTAGATATCGCTTGCTTTTCAATACCTGGGAAGATGAGAAAGTGAAGCAAATTCTAGATTTTCTTGGATTTCATGCTGAATATGGCCTACGAGTTCTTGGATTTGGGCAGGTACATTGTTCAAGAATTAGCACAAAACAACCCGAGAAATATGAAGTGGTTGCAGATTCTGACTAGGTTGAGCGATTTCCAAGATCTCTGCGAAGTTCTGTCAAACAATATGGCAGGAGAAAATCTTGAAGCCATAGTTATTGATTATTGTTAATATAACTCTCATAAAAAAACACTGGTCGATGCTCTATCGAAATGGGTCACCTTAAGTTGCTCCTATGTGTGGATCTGAATTCCTGTGGAACCCTTAGTTATCTTTCTAAGGAATTAGGATATCTTAGTTGGTTTGAATATCTTTTCAGTATTTGCCACGAGATTTTCAGCCAAAGAAGCTTGTTGAGTCGTCTCTACATTACAGCAGCCTTAAACAGTTATGGGAAGACACAAAGAGTTCCTAAAGAGTCGATCAGTTGTTTGTTGCCTTCCTCACCTATTTTCCCATGTATGAGTCCACTTAATCTAAGTTTCTGCAATTTAGTTGAAATCCCTGATGCTATTGGAAATTTAAGTTGCTTAGAAAGGCTAAATTTAATGGGAAACAGTTTTGCTACACTACCCAGCCTCAAGGAGCTTTCCAAACTATATTATTTAAACTTGCAGCATTGCCAGCAGTTGAAATATTTGCCAGAGCTCCCTTCACGAATTGAGTTACCGTCAAAAGGGTATGATGCTACTTCCTTCTTCCTCTCATATCTCTCTCTTTATGTGTTGATCCCTTTGAGTCAGGAACACTTGTGCTTGCTTCCTTCCACTTTCGCAATTGCAATGGCTTCTAGCACTGTCATCCACCCCATAAAGACATACGATGTGTTTGTGAACTTCCGTGGTGACACACGAGACAACTTCACTGCTCTTCTTTTTCAAGCTCTCCATAGGAATGGCATTTACGCCTTCAAAGATGATGAATATCTCACGAAAGGTGAACTTATAGAACCCGAGCTAGTTAGCACCATTATAGGCTACAACATGCAGAGATTGAAGAAATTGCCACAGCATGATGAAATTGAGGAAATTGTTCGAAACATTATAAATATATTAGGTTCCAAATTTTCAAGTCTTCCAAATGATAATCTTGTTGGGATGGAATCTCGTCTTGAAGAATTAGCAAAGCTTTTACATTTGGACTCGGATAATGACACTAGAGTCGTTGGAATTTGTGGCATGGCTGGAATAGGAAAAACCACTCTTGGTCGTGTTTTATACGAAAGAATCTCTCATCAATATGATTTTCGTTGTTTTATTGATGATGTAAACAAAATTTATCGAGATTCTAGTACATTAGGGGTGCAAAAACATTTACTTTCTCATTCTCAAATTGAGAAAAATGTTGAGATTTGTAATGTATCCATGGGAACATGTTTGGTATGGAGTAGGCTACGCAATGCAAAGGCACTTATAGTTTTTGATAATGTTGATAAAGTGGAACAACTAAAGATATTTACAGGGAATAGAGAGACTCTGTTACGTGAATGCCTTGGTGGAGGAAGTAGAATCATCATAATATCTAGGGATAAACATATATTGCGAACACATGGAGTCGATGATGTGTACCACGTTCAACCATTGAATGACGAACATGCTGTTCAATTGCTTTGCAGAAATGCTTTCAAAGGTAATTATATTATGAGTGATTTTGAAATTTTGATACATGATTTATTAATTCATGCTCAAGGCCATCCCTTAGCAATTGAAGTGTTAGGCTCTTCTTTGTTTGGTCGAAATGTCTGA 2410 0.3701 MGHLKLLLCVDLNSCGTLSYLSKELGYLSWFEYLFSICHEIFSQRSLLSRLYITAALNSYGKTQRVPKESISCLLPSSPIFPCMSPLNLSFCNLVEIPDAIGNLSCLERLNLMGNSFATLPSLKELSKLYYLNLQHCQQLKYLPELPSRIELPSKGYDATSFFLSYLSLYVLIPLSQEHLCLLPSTFAIAMASSTVIHPIKTYDVFVNFRGDTRDNFTALLFQALHRNGIYAFKDDEYLTKGELIEPELVSTIIGYNMQRLKKLPQHDEIEEIVRNIINILGSKFSSLPNDNLVGMESRLEELAKLLHLDSDNDTRVVGICGMAGIGKTTLGRVLYERISHQYDFRCFIDDVNKIYRDSSTLGVQKHLLSHSQIEKNVEICNVSMGTCLVWSRLRNAKALIVFDNVDKVEQLKIFTGNRETLLRECLGGGSRIIIISRDKHILRTHGVDDVYHVQPLNDEHAVQLLCRNAFKGNYIMSDFEILIHDLLIHAQGHPLAIEVLGSSLFGRNV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03758 510 Gene3D - 200 258 IPR035897 -
Pste1g03758 510 PRINTS Disease resistance protein signature 393 407 - -
Pste1g03758 510 PRINTS Disease resistance protein signature 317 332 - -
Pste1g03758 510 PRINTS Disease resistance protein signature 491 505 - -
Pste1g03758 510 SUPERFAMILY Outer arm dynein light chain 1 80 144 - -
Pste1g03758 510 SUPERFAMILY Toll/Interleukin receptor TIR domain 194 253 IPR035897 -
Pste1g03758 510 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 150 IPR044974 GO:0006952
Pste1g03758 510 Gene3D Ribonuclease Inhibitor 65 172 IPR032675 -
Pste1g03758 510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 278 507 IPR027417 -
Pste1g03758 510 Pfam TIR domain 203 253 IPR000157 GO:0007165
Pste1g03758 510 Gene3D - 272 449 IPR027417 -
Pste1g03758 510 Pfam NB-ARC domain 298 505 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03758 Pste-Chr1 18435012 18441644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03758 294 508 WRKY Transcription Factor Family AT5G45050 31.163 2.04e-24 105