Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03755 ATGGACTTGAATCAGTTTTTAAGTTCCAGTGTGACTAGTTCGGCAGGAACCTCTTACACATCGTCTTATCCTCTTATTTCACCAATACCCAACCGGTTGTTTGGATCCTTGAAACTTGACACAGGAAACTCACCTAATTCGGCGCTTTCTTCTCATGTTGATTCTGATACTCTCTCTTCTGCATTAAGTGACAGCCAGGAACAGCACACCTCAGGGGAAATTCACTCTGGTGTCAACTCCTGTAACTCTTTGTTGGAAAGCAATCATTATTTGCATAGGCCAGTCTCATCCGTGGACTATCTCAAAGACAATTTGCATCTATCTACTAGTAGCTTTCTTCCGCATAATACAAGTTTTAGCCATGAAACCAGACATGCATTGCTGGAATTAGAAACTGCTTTGATGGCACCTGATGGTGATGATCATGCCACCACGTCAGGCACTTCTTTGGGTTTTAGCAGTAGGCCAACAACATCTGGCGAAAGAAGTTTGTCCAGGAGCAATGATGACCAGTCTAGTGATGTTGCACATATAGAGAAGCGTCACAAATCAATGGATCAAGTATCGCCACAAGAATTCCCATCCAGCCATTTGAAACAATTGCTGATTGTATGTGCCAAAGCCTTGTTCGAAAACAACAAGAAAGACTTTGATCAATTAATAGAAAAGGCAAGAAGTTCTGTGTCTATAACTGGGGAGCCAATCCAACGCCTTGGTGCTTATTTGGTAGAAGGGCTTGTTGCAAGGAAGGAGGCATCAGGGAATACCATCTACCATGCCCTTAGATGCAGAGAGCCTGAGGGAAAAGACTTACTCTCTTACATGCAGTTACTGTATGAAATCTGTCCCTACTTAAAATTTGGTTGCATGGCTGCCAATGGTGCTATTGCTGAAGCTTGTAGGAATGAGGACTACATTCATATCATAGACTTTCAGATTGGTCAGGGAACTCAATGGATGACACTTCTTCAAGCTCTAGCAGCAAGACCTGGTGGAGCACCCCATGTAAGGATCACAGGGATTGATGATCCCCTTTCTAAATATGTTCGTGGTGATGGATTAGAAGCCATTGGGAAAAGGTTAGCTGTGATCTCTAAGGCGTTTAATATCCCAGTTGAGTTCCATGGTGTGCCTGTTTTAGCTCCAGATGTGACAAAAGACATGCTTGATGTTAGGCCCGGTGAGGCTTTGGCTGTGAACTTCCCTTTGCAACTCCATCATACTGCTGATGAGAGTGTTGATATGAGTAATCCAAGGGATGGACTTTTGAGATTGGTGAAATCACTTTCTCCCAAGGTAACTACGTTGGTAGAGCAAGAGTCAAACACAAACACCACTCCTTTCTTCAACAGGTTTATAGAAACCTTGGATTACTACTTAGCAATGTTTGAGTCCATTGATGTTTCTCTCCCAAGAAAGAGCAAGGAGCGGATTAATGTGGAGCAACATTGTCTGGCTCGGGATATTGTCAACGTTATTGCTTGTGAAGGAAAGCAAAGGGTAGAGAGACATGAACTGTTCGGCAAATGGAAGTCTAGGTTAACAATGGCTGGCTTTCGTCAATATCCTTTGAGTTCTTATGTGAATTCTGTCATAAGAAGCCTGCTGAGGTGCTATTCAGAACATTATAGTCTTGTGGAGAAGGATGGGGCCATGTTGCTGGGATGGAAGAACAGAAATTTGATTTCAGCTTCAGCTTGGCATTGA 1707 0.4312 MDLNQFLSSSVTSSAGTSYTSSYPLISPIPNRLFGSLKLDTGNSPNSALSSHVDSDTLSSALSDSQEQHTSGEIHSGVNSCNSLLESNHYLHRPVSSVDYLKDNLHLSTSSFLPHNTSFSHETRHALLELETALMAPDGDDHATTSGTSLGFSSRPTTSGERSLSRSNDDQSSDVAHIEKRHKSMDQVSPQEFPSSHLKQLLIVCAKALFENNKKDFDQLIEKARSSVSITGEPIQRLGAYLVEGLVARKEASGNTIYHALRCREPEGKDLLSYMQLLYEICPYLKFGCMAANGAIAEACRNEDYIHIIDFQIGQGTQWMTLLQALAARPGGAPHVRITGIDDPLSKYVRGDGLEAIGKRLAVISKAFNIPVEFHGVPVLAPDVTKDMLDVRPGEALAVNFPLQLHHTADESVDMSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAMFESIDVSLPRKSKERINVEQHCLARDIVNVIACEGKQRVERHELFGKWKSRLTMAGFRQYPLSSYVNSVIRSLLRCYSEHYSLVEKDGAMLLGWKNRNLISASAWH 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03755 568 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 161 564 IPR005202 -
Pste1g03755 568 Pfam GRAS domain family 198 567 IPR005202 -
Pste1g03755 568 MobiDBLite consensus disorder prediction 45 75 - -
Pste1g03755 568 MobiDBLite consensus disorder prediction 137 192 - -
Pste1g03755 568 MobiDBLite consensus disorder prediction 172 187 - -
Pste1g03755 568 ProSiteProfiles GRAS family profile. 189 568 IPR005202 -
Pste1g03755 568 MobiDBLite consensus disorder prediction 142 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03755 Pste-Chr1 18422983 18424689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03755 121 567 GRAS Transcription Factor Family AT5G48150 56.027 3.94e-174 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste1g03755 GRAS 4.9e-126 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03755 1 18422983 18424689 Pste1g03755 1 18422983 18424689 ECH
Pste3g02563 3 18572333 18574096 Pste1g03755 1 18422983 18424689 PCT