Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03753 CTTTGATTCTCTCAGCTTTCTCTGCTAACATAAAGCAAGTGACTGTCTCAGGGTTCCTTCTTTTGTTTTGTTTTTTTTACCATAATGAACAGGCCTATAAATTGATTGAATGATCAACGTAGAATAGCAAAGAAGTGGAGGAGATGAGAGAGGGGTCAATAGGACTGATTATTGGGGTTTCCATTGGTGTGGTTATTGGGCTAGTTTTGGCAATTTTTGCATTCATCTGTCAGAGGTATCATAGGAAGCGTTCACATATAGGCAATAGCAGTTCTAGAAGGGCTGCTACCATACCTATCCGTACAAATGGTGCTGATTCTTGCACTATTCTATCAGACTCAACCTTAGGTCCTGAATCACCCATAAAGTCAGGAAGACATAGCATGCCCTTTTGGCTTGATGGGCTTAGGAAGAGTGCTAACATGGTCCCGGCATCAGGACTACCTGAATATGCATACAAGGATTTGCAGAAGGCAACACATAATTTTACTACAGTCATAGGACAAGGTGCATTTGGTCCTGTTTATAAAGCTCAGATGTCTACTGGTGAGACTGTTGCAGTTAAAGTCCTAGCAACTAATTCTAAGCAGGGGGAGAAAGAATTTCACACAGAGGTTCCCAATGTCATTTTCCGTAACTTTGGCCACATCACTGGTAGAAGTTTGCTGTACATGGACAAAATTTCACGGCCAGGTTTTGTTGTTGGGAAGGTTACACCACAGAAATCTGAAAAGGGTCAACATATGCTTGTGTATGTCTATATGAGTAAGGGCAGCTTGGCATCCCACTTGTATAGTGATGTCAATGAAGCACTGTGCTGGAATTTGAGGGTGCAAATAGCATTAGATGTCGCAAGAGGCTTGGAGTATCTTCATGATGGGGCTGTCCCTCCAGTAATCCATCGAGACATCAAGTCTTCCAATATTCTGTTGGATCAATCCATGCATGCCAGGGTTGCTGATTTTGGACTTTCAAGAGAAGAGATGGTTGATAAACATGTAGCTATTCGTGGTACCTTTGGCTATCTTGACCCTGAGTACATATCTTCAGGAACATTCACGAGGAAAAGTGATGTATACAGTTTTGGGGTGTTGCTCTTTGAAATTATAGCTGGCAGAAACCCTCAGCAGGGCCTTATGGAATATGTAGAGCTTGCAGCAATGAACAGCGAGGGAAATGTTGGGTGGGAGGAAATTGTGGATTCTCACCTTCAAGGAAACTTTGATGTCAACGAACTAAATGAAGTGGCAGCACTTGCCTACAAATGCATCAACCGTGACCCAAGTAAACGTCCTTCTATGAGGAACATATTGCAAGTGTTGACAAGGATCCTTATATCAAGGCACCATGGGAATCATTACAAAAATTCCTTGTCAGCCACAGATGAAGTTTTCATTGATCCTGATCAGCTAGAGACCATGATTTCTGTTACTGACCATAGGAAAGAAGAGTCTATAGATAGTGTAGCAGAGATGCATGATGTGTAGAATATGGTTTTACCTTAATTAACCTCATTTTTTTTACATTTCATTTTTTTATTTTGGCTTTGGTTGTACATGGTTGTAGATTTGGTTTGTATACTGTTGTGTAAAATGTTTAACAAATTTTTTTGGCCTGGCATTAGTTATATTGTCTTGAAAAAATGATACTCCAAAATTTATTATACTTGTTAGCACCAAACAAGTAAGCTGTTAGCTGTCTCCTCCC 1707 0.4054 MREGSIGLIIGVSIGVVIGLVLAIFAFICQRYHRKRSHIGNSSSRRAATIPIRTNGADSCTILSDSTLGPESPIKSGRHSMPFWLDGLRKSANMVPASGLPEYAYKDLQKATHNFTTVIGQGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFHTEVPNVIFRNFGHITGRSLLYMDKISRPGFVVGKVTPQKSEKGQHMLVYVYMSKGSLASHLYSDVNEALCWNLRVQIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMHARVADFGLSREEMVDKHVAIRGTFGYLDPEYISSGTFTRKSDVYSFGVLLFEIIAGRNPQQGLMEYVELAAMNSEGNVGWEEIVDSHLQGNFDVNELNEVAALAYKCINRDPSKRPSMRNILQVLTRILISRHHGNHYKNSLSATDEVFIDPDQLETMISVTDHRKEESIDSVAEMHDV 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03753 447 Pfam Protein tyrosine and serine/threonine kinase 115 393 IPR001245 GO:0004672|GO:0006468
Pste1g03753 447 SMART serkin_6 113 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03753 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Pste1g03753 447 ProSiteProfiles Protein kinase domain profile. 113 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03753 447 Gene3D Transferase(Phosphotransferase) domain 1 207 416 - -
Pste1g03753 447 PANTHER OS01G0750732 PROTEIN 6 401 - -
Pste1g03753 447 FunFam calcium/calmodulin-regulated receptor-like kinase 1 207 414 - -
Pste1g03753 447 SUPERFAMILY Protein kinase-like (PK-like) 93 393 IPR011009 -
Pste1g03753 447 Gene3D Phosphorylase Kinase; domain 1 97 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03753 Pste-Chr1 18380015 18385286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03753 103 396 Receptor kinase-like Gene Family AT5G48740 40.594 2.67e-60 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pste1g03753 PK_Tyr_Ser-Thr 9.2e-42 CL0016