Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03748 CTTGTTTTTTTCAAACACCCGTGTTTTAACTAATGCTCTTATTCATGTTTTTTCATCGTAAGGGTTTGAGTCTCTTTTGTCTCACTTGTTCTCTGATGGGGTCACGTTCCCGGTCACCATCTTATGCAACTTGCTAAACTCATTCTGTGTCATGAAGCAGAACGGCCCCTCACACTACTCTTCATGGTAGCATCTGTACTTGAGAGTTTTCAAGGTGTTTTATGCTAGTTTGGTGTGGTATTTTGAATTTTGTTTCAAGATGTTAACACCTGTTCTTCATGGTATTTTGATTTCTCTTGTGAAACATTGTTTTTCTGTTAGGTAGCCCTTTTGATGCATGGTTGAGTTGAGTTGTTTCTTGGAAAGTGAAGGAGTTTCAGAAAAGAAAAAAAGGATGTTGTTTGCTTAAAGCAGAAAGAAGCTGAAGTCGTTGTCTTTTTGAGTTTTTTTTTCATTCTCTCAGCTTTCACTTAGGAAAAGGGAGGGAAAGGTGGAAAAGGGAAACATGGAGATGGAGCCTTTTGAGAATGAGCATTGTAAGATAGTTAAGTTCAAGAGCACAGAAACATAGGAGAGTCTAGTTGAAGTGAATGGAGAAAGACGATAAAAAAAAGATAAAGGGAAACATTAAGGATAATATGCCAACAGTTTGGTTCTCTCTTAAGAAGTCTTTACACTGCAAATCTGAAACATCTGATGTTCATGACCCCAAAACAAGGAAGCACTTGAGCACAATCTTGACCAAGAGAGCAGGGAGGTCAGGGTGTTCCAGGTCCATAGCAAATCTCAAAGATGTCATTCATGGAAGCAAGAGGCATCTTGATAAACCACCAAGTTGCAGTCCAAGATCCATAGGAAGCAGTGAGTTCCTCAACCCCATAACTCATGAGGTGATTTTGAGCAACTCAAGGTGTGAGCTGAAGATAACTGGCTATGGAGGGTTCCAAGAAGGGGTTGGTAGTGGTGGTAGCAATGGTGTTGGAGGTAGTGGTGGTTCAACTTTTGTGGGGACTTTGAGGCCTGGAACTCCTGGTCCTGGAGGGCACCCAACAATGCACTATTTTAACCCTTCTTTTAAGACTTCATCCACTCCTCCAAGAAAATCTCCTTTCCTTTTATCAGATAAAGAAGGGTCTGGTCCTCATGGTGGTGGACTACTTCCTAGCAATAGGTTGTCTCTTGAGACAGATTCTAATGGCTCTTCAACTGTGACTTGCCACAAATGTGGAGAGCAATTTAACAAATGGGATGCTGCTGAAGCTCATCATCTGTCCAAGCATGCTGTGACTGAGCTTGTGGAAGGAGATTCATCAAGGAAAATAGTGGAAATCATATGCAGAACTAGCTGGTTAAAGTCTGAAAACCAGTGTGGTAGAATTGAGAGAGTGTTGAAGGTTCACAACATGCAAAAGACTCTTGCAAGATTTGAAGAGTACAGGGAGATGGTGAAAATCAAAGCCAGCAAACTCCAGAAGAAGCATCCTAGATGCCTGGCTGATGGGAATGAGCTTTTGAGATTCTATGGCACCACTGTTTCATGCTCACTTGGCCTAAATGGCTCTTCTAGCCTCTGCCTATCAGAAAAATGTTGTGTTTGCAGAATCATAAGGAATGGTTTTTCAGCCAAGAAGGAACTCAAGGGTGGCATTGGAGTTTTCACAACATCTACAAGTGGAAGGGCCTTTGAGTCCATAGAGATAATTGGTGATGAACCATCACTGAGAAAAGCACTCATAGTATGCAGAGTAATTGCTGGCAGGGTTCACAGGCCACTTGAGAACATTCAAGAAATGGCAGCACAAACAGGATTTGACTCATTGGCTGGGAAAGTTGGTCTATATTCAAACATTGAGGAGCTTTATCTGCTCAATCCTAGAGCTCTTCTTCCTTGCTTTGTGGTGATTTGCAAACCTTGAACCAAAAGGGTCAAAGTCAAAATTCCTTACATGTTGTGTAGTTTTGTAGATCCCCCTATTTTGGCCTTATGGAGGTTCTTTGTCATTCATGTTTTAAAGAATTTTGATTCTTTCCCTCAAGTCAATGGTGCTTCTTCATGTTTATTGTATGAACCTCCTATTCATACATTTGTAATTTTTAAAAAATTGATATCAATATTTTTACGCCTGCACAAGGCACCATTAAGGTCA 2147 0.4089 MEKDDKKKIKGNIKDNMPTVWFSLKKSLHCKSETSDVHDPKTRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLDKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGVGSGGSNGVGGSGGSTFVGTLRPGTPGPGGHPTMHYFNPSFKTSSTPPRKSPFLLSDKEGSGPHGGGLLPSNRLSLETDSNGSSTVTCHKCGEQFNKWDAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTVSCSLGLNGSSSLCLSEKCCVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFESIEIIGDEPSLRKALIVCRVIAGRVHRPLENIQEMAAQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03748 441 MobiDBLite consensus disorder prediction 163 191 - -
Pste1g03748 441 FunFam C2H2-like zinc finger protein 231 440 - -
Pste1g03748 441 Gene3D - 221 440 - -
Pste1g03748 441 ProSitePatterns Zinc finger C2H2 type domain signature. 209 230 IPR013087 -
Pste1g03748 441 SUPERFAMILY ADP-ribosylation 232 440 - -
Pste1g03748 441 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 20 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03748 Pste-Chr1 18354269 18356979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03748 17 441 C2H2 Transcription Factor Family AT5G54630 68.980 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste1g03748 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03748 1 18354269 18356979 Pste1g03748 1 18354269 18356979 ECH