Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03744 TAGTCAGAGTTTCTCTCTCTTATATGCCTCTCTAACTGAGTGTTTGTGCTTCAAAATGGTCACCAAAAACTAGAAGCGGTCTCCATTATCACTCACTTCCAAACCTCCACCTCCTTCTAAGGTTTCAGAATTTTGTGGGTGATGTGCTCCTCCTAGAACACAAAGAGAAAAGAGTTGGAGTAGAAAGAATGGTGGGGACTCCAATTAATGGAAGAACAAGGCAAGCTTTCACAGTTGTCAATGGTGGTGGCCACGATCTTGGCCCCAGTAGTGCTCCTCCAAGCAATGCTGGATCTGATTATGGTGCCATAGAGTTCACAAGAGAGGATGTGGAAGCACTGCTAAGTGAGAAAGCCAAAAGAAAAGATAGATTTAATTATAAGGAAAGATGTGAAAACATGATGGATTATATAAAAAGGCTTAAGGTTTGTATCAGATGGTTCCAAGACCTTGAGATGTACTACTCTCTAGAGCAGGAAAAGTTAAAGAATTCACTGGAATTGACCCAGCAAAAATGCATAGAAATTGAGTTGCTGCTTAAAATCAAGGAAGAAGAATTAAATTCAATTATTACGGAAATGAGAAGGAATTGCACTTCTTTGCAAGAAAAATTGATAAAGGAAGAAACCGAAAAAACGGCTGCAGTGGAATCTCTTGTTAAAGAAAGAGAGGCTAGGCTTGACATTGAGAGGTCACATACTACTCTGTCAGATGACCTTGGAAGAGCTCAAAGAGAGATCCAAAGTGCAAATCAGAAGATAGCATCACTCAATGACATGTATAAGCGGTTACAGGATTACATTACAAGCTTACAACAATACAATGGCAAACTTCATTCTGAGCTCTCATCAGTTGAGGATGAACTTAAACGTGTAGAGAAAGAGAAGGCTACTGTAGTGGAGAACATCACCATGTTAAGGGGTCAACTTACTATATCAGTTTCTTCTCAAGAAGAGGCCATAAAACAGAAGGATGTCCTGGCTACAGAAGTTTCTTCTCTTAGAGGAGAGTTGCAACAAGTAAGAGATGAGCGAGACCGGCAATTATCTCAAGTTCAAACTTTAAGTTCTGAATTAGAGAAATTTAGAGAATCTACGAAACAGTCCTCAACTGAAGTGGACAGCTTGACATTAAAAGCAAATGACCTGGAGGAAAAATGTTCATTGAAAGATAATCAAATAAAGGTATTGGAAGAGCAGCTAGCAACTGCTGAGAAGAAACTGCAGGTGTCTAATATATCTGAATATGAAACAAGGACAGAATATGAAGGACAACAGAAATTTGTGAATGAGTTACAAAGACGCTTGACCGATGCAGAATATAAACTTATAGAAGGGGAAAGGCTGCGGAAAAAATTACATAATACCATTTTGGAGTTAAAAGGGAACATTCGTGTATTCTGTCGAGTGAGGCCCTTATTACCTGATGAAAGTTGTAGTACAGAAGGCAAGATTTTCAGTTATCCAACATCAATGGAAACTTCTGGACGAGCCATTGACCTAGCCCAAAATGGCCAAAAACATTCTTTTACATTTGATAAAGTTTTTACACCAGAGGCATCACAAGAAGAAGTTTTTGTAGAAATTTCACAGCTAGTACAAAGCGCACTTGATGGTTACAAGGTTTGCATCTTTGCCTATGGACAAACAGGTTCAGGGAAAACCTATACAATGATGGGAAGGCCAGGGCATCCAGAAGAAAAGGGCTTGATACCTCGTTCACTAGAACAAATATTTCAAACAAAGCAGTCTCAACAACCTCAAGGCTGGAAATATGAAATGCAGGTGTCAATGTTGGAAATATACAATGAAACAATTCGTGATCTGATATCTACAAACAGATCATCTGATGCAACACGCATGGAAAATGGAACTCCTGGAAAACAATATACAATTAAACATGATGCGAATGGAAATACACAAGTTTCTGATCTTACAGTAGTGGATGTTCAAAGTGCTAGAGAGGTTGCGTTTCTTCTAAATCAAGCGGCAAATAGCAGATCTGTGGGAAAAACCCAGATGAATGAACAGTCGTCAAGAAGTCATTTTGTATTCACTCTTCGAATATACGGTGTAAATGAGAGCACTGACCAACAAGTTCAAGGTGTTCTGAATCTCATAGATCTTGCTGGTAGCGAACGGCTATCAAAGAGTGGATCAACTGGGGACAGGTTGAAAGAAACTCAACCATGTCTAGGTGGAGACTCCAAGACACTAATGTTTGTGAACATTTCACCTGATCCATCTTCAGTTGGTGAGTCACTATGCTCACTGAGGTTTGCATCAAGAGTCAATGCTTGTGAGATTGGAACCCCAAGGCGTCAAACCAATGGACGTTCTATAGAGTCTAGATTGAGCTATTTCTAATCTTGATAAATGTGTATTTGTTTGTTAACCATTTGTGGCAACCAAGTGCCTGTGTGAGTACCACAATAAAATGAAGATGAAAATGAAAATGAGATTGATTCTAACAACGGCATATAGCTTGTATAGTTACTAAGCATGCATTTGGAACCAATGCATTTGGAACCAATGCATTTGGAACCAAT 2548 0.3913 MVGTPINGRTRQAFTVVNGGGHDLGPSSAPPSNAGSDYGAIEFTREDVEALLSEKAKRKDRFNYKERCENMMDYIKRLKVCIRWFQDLEMYYSLEQEKLKNSLELTQQKCIEIELLLKIKEEELNSIITEMRRNCTSLQEKLIKEETEKTAAVESLVKEREARLDIERSHTTLSDDLGRAQREIQSANQKIASLNDMYKRLQDYITSLQQYNGKLHSELSSVEDELKRVEKEKATVVENITMLRGQLTISVSSQEEAIKQKDVLATEVSSLRGELQQVRDERDRQLSQVQTLSSELEKFRESTKQSSTEVDSLTLKANDLEEKCSLKDNQIKVLEEQLATAEKKLQVSNISEYETRTEYEGQQKFVNELQRRLTDAEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLPDESCSTEGKIFSYPTSMETSGRAIDLAQNGQKHSFTFDKVFTPEASQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLISTNRSSDATRMENGTPGKQYTIKHDANGNTQVSDLTVVDVQSAREVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQPCLGGDSKTLMFVNISPDPSSVGESLCSLRFASRVNACEIGTPRRQTNGRSIESRLSYF 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03744 725 Coils Coil 261 295 - -
Pste1g03744 725 SMART kinesin_4 398 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste1g03744 725 Coils Coil 303 351 - -
Pste1g03744 725 PRINTS Kinesin heavy chain signature 640 658 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste1g03744 725 PRINTS Kinesin heavy chain signature 609 626 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste1g03744 725 PRINTS Kinesin heavy chain signature 476 497 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste1g03744 725 Gene3D Kinesin motor domain 344 664 IPR036961 -
Pste1g03744 725 ProSitePatterns Kinesin motor domain signature. 639 650 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pste1g03744 725 Coils Coil 366 386 - -
Pste1g03744 725 Coils Coil 170 204 - -
Pste1g03744 725 PANTHER KINESIN-LIKE PROTEIN KLP-3 666 712 IPR027640 GO:0003777|GO:0007018
Pste1g03744 725 ProSiteProfiles Kinesin motor domain profile. 400 725 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste1g03744 725 Gene3D - 665 723 - -
Pste1g03744 725 Pfam Kinesin motor domain 406 666 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste1g03744 725 Coils Coil 212 239 - -
Pste1g03744 725 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 702 IPR027417 -
Pste1g03744 725 Coils Coil 121 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03744 Pste-Chr1 18310105 18316737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03744 95 718 Calmodulin-binding Proteins AT5G65930 29.129 7.19e-59 214