Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03734 GGAGAACAAAAAATGGGTAGTTGTGGAAGAGAAGGTGTAGTGAGGCAGTATATAAGATCAAAAGTCCCTCGTTTAAGATGGACTCCTGAACTTCATCGTTGCTTTGTTTATGCCATTGAGACCCTTGGAGGTCATCACAAGGCTACTCCTAAACTTGTTCTTCAATTGATGGATGTTAAAGGGCTCACAATTTCACACGTCAAGAGCCATCTGCAGATGTACAGAAGCATGAAAGGTGACTCCTGCAGACAAGATAGGACTTCCACCCTACATAGAAAACAATCTTTTCAGGAGCATGATGATGAAGTGAGTGATGCTGGTTTTCACTCTTGCTTAAAATCCATCAGAAAAGAATCTGATTCCCTCCCTAGCTGCAGTAATTTCTCCCCAAAAAGGGCTAGAATCGAGAAGGCAAGTTTACTCTCTGGAATCCTACAATGCAGCCAAGGAATATGTGAAGCAGTTCCAAATCCATACACTACTTTTTATGATTACCTGCAGAGCATGGCTGAGCAGAAGGGAATAAAGAAGATTTGTGTTGGTTCAATATGGCAGCAGACTCAACCCTTTTCCACAACCTTTCCTATGCTCCCAAAGCAAGTAGCAGATTTGGTCCAGGTTGCCAAATTGAATGAAAAACAGCCTTTAAATGAAGATGAACACATAGGAGGTTGTGAGTTGTCACTATCTATCTCATTGCCACAACCCCATCCTTCCTCTCAGAAAAGTAATGTTTCTTCAGTCAGTGAGACCAGTGAGGCATTTTCATTGTGCCCTGAGTTTAGCAACAATAACATGGGCTGTTCTAGTTCTTCCAATGTCCCAAACTCAATTAATTTGGACCTTTCTTTGGCCATTTGA 861 0.4181 GEQKMGSCGREGVVRQYIRSKVPRLRWTPELHRCFVYAIETLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMKGDSCRQDRTSTLHRKQSFQEHDDEVSDAGFHSCLKSIRKESDSLPSCSNFSPKRARIEKASLLSGILQCSQGICEAVPNPYTTFYDYLQSMAEQKGIKKICVGSIWQQTQPFSTTFPMLPKQVADLVQVAKLNEKQPLNEDEHIGGCELSLSISLPQPHPSSQKSNVSSVSETSEAFSLCPEFSNNNMGCSSSSNVPNSINLDLSLAI 286
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03734 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 79 IPR017930 -
Pste1g03734 286 Pfam Myb-like DNA-binding domain 25 75 IPR001005 -
Pste1g03734 286 SUPERFAMILY Homeodomain-like 21 77 IPR009057 -
Pste1g03734 286 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 10 99 IPR046955 GO:0003700
Pste1g03734 286 FunFam Myb family transcription factor 21 79 - -
Pste1g03734 286 NCBIfam myb-like DNA-binding domain, SHAQKYF class 23 77 IPR006447 GO:0003677
Pste1g03734 286 Gene3D - 22 78 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste1g03734 Pste-Chr1 18218883 18223322 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03734 5 78 G2-like Transcription Factor Family AT1G14600 70.886 1.54e-33 121
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste1g03734 Myb_DNA-binding 1.5e-05 CL0123
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03734 1 18218883 18223322 Pste1g03734 1 18218883 18223322 ECH