Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03726 GTAGGGTCAAGGGAATGGGGAACAATACTATGTTTCGTTATGCAGATAGACTGGACAAGTTGTTGATGTTCTTTGGGACCTTGGGAAGCCTTGGAGATGGACTACAAACCCCTCTCATGATGTACATTCTTAGTGATGTGATCAACGCCTACGGAGACAAGAATAGTCATTTGACAAAGCATGATGTGAATAAGGTAAGCTTGTTCAATAAAATCTCTATTCTTCTGCTATACACTACAAAGTGCACATATACATCATCTACTCAATTACCTCCCTTACAAAATTTACATAAACTGGTTATGCAAATAGCATGGCTAGTATTAGAAAAAATAAATGTAACTACTTTTCATATTGTATACCAACTGATGCTGGTTACTACAGAAGGAATATGTTGGACAAGAACTGCTGAGAGACAGGCTTCCAGAATGAGAATGGAATACCTAAAATCAGTCCTAAGACAAGAAGTTGGTTTCTTTGATGCCCAAACTGCTGGTTCTTCAACGACCTACCAAGTTGTCTCACTCATTTCCTCTGATGCAAATACCATCCAAGTTGCCTTGTGTGAGAAGATACCAGACTGCATGGCTTACATGTCAACATTCCTATTCTGCCACATCTTAGCATTTGTACTTTCTTGGAGACTTACATTGGCAGCCATACCACTCTCTGTCTTGTTCATTGTTCCAGCACTTGTATTTGGGAAAATCATGTTGGATCTTGCAATGAAAATGATTGAGTCTTATGGAGTTGCTGGTGGGATAGCAGAACAGGCAATATCTTCAATAAGAACTGTTTATTCATATGTTGGGGAGAATCAAACACTAAACAGATTTAGCAGTGCACTTCAAAAAACTATGGAATTTGGAATAAATCAAGGTTTTGCAAAAGGGTTGATGTTGGGAAGTATGGGAGTTATTTATATAAGTTGGGGTTTTCAGGCTTGGGTTGGAACATTTCTGATCTCTAATAAACATGAAAAAGGTGGCCATGTATTTGTAGCCGGCTTCAATGTCCTCATGGGAGGCTTGAGCATTTTAAGTGCCCTTCCAAATTTAACTGCCATCACAGAGGCAACTGTTGCTGTCACTCGTCTTTTTGAAATGATTGATCGGGTGCCAACTATAGATTTTGAAGATAAGAAAGGAAAGGCATTATCATATGTGAGGGGAGAAATTGAATTTCAAGATATCTACTTTTGTTACCCATCTAGGCCAGACACACCTGTCCTGCAGGGATTCAATCTCACTGTCCCAGCAGGCAAGAGTATAGGCCTTGTGGGAGGTAGTGGTTCAGGTAAATCCACTCTCATAGCATTGCTTGAAAGGTTTTATGACCCTGTTGAGGGACAAATACTCTTGGATGGTCACAAGATTAATAGGCTTCAATTGAAGTGGTTGAGATCTCAACTTGGCCTAGTGAATCAAGAGCCTGTTCTCTTTGCCACTTCTATAAAAGAGAATATATTGTTTGGAAAAGAAGGGGCTTCAATGGAAAGTGTGATAAGTGCGGCTAAAGCAGCTAATGCACACGATTTCATTGTTAAGTTGCCAGATGGATATGAAACTCAAGTTGGGCAGTTTGGATTCCAATTGTCTGGTGGACAGAAGCAACGCATTGCGATAGCAAGAGCCTTATTAAGGGATCCAAAGGTTCTCTTGCTTGATGAAGCTACCAGTGCACTGGATGCTCAATCTGAAAGAGTGGTACAGGCAGCAATTGATCAAGCTTCAAAAGGAAGGACAACAATCATCATTGCTCACCGCTTGTCTACAATTCGAATGGCTCACTTGATAGCAGTTCTTCAAGCAGGGAGAGTGGTTGAATCAGGTACTCATAATGAGCTCATGGAATTGAGTGATGGGGAGTATGCTCACATGGTAGAGTTGCAGCAAGTAACAACTCAGAATGATGAATCCAAACCTTCCCATCTTCAAATAGAAGGAAAGAGCTCCCACAGAATGAGCATTCCACAAAGCCCTACTGTAAGTTTCAGATCTAGCACTGTAGGCACTCCAATGTTGTATCCCTTCAGTCAGGGATTTTCCATGGGAACACCGTACTCCTACTCTATCCAATATGACCCTGATGATGATAGTTTTGATGATAACTTGAAAAGACCAAATCATCCAGCTCCTTCACAGTGGCGTTTGCTGAAAATGAATGCACCTGAGTGGGGAAGAGCAGTGTTAGGAATCTTAGGAGCAATAGGGTCAGGAGCAGTGCAACCTGTGAATGCATACTGTGTAGGAACACTTATATCAGTTTATTTTGAAACTGATAAATCTGAGATGAAGTCAAAGGCTAGAGTCCTGGCCCTCATTTTCTTAGGAATTGGTGTTTTCAACTTCTTCACTAGTATTCTCCAACACTATAACTTTGCAGTCATGGGAGAAAGATTGACCAAAAGAATAAGAGAGAAGATACTGGAGAAGTTGATGACTTTTGAGATAGGGTGGTTTGATCATGAAGAGAACACAAGTGCATCCATTTGTGCAAGATTATCCTCTGAGGCCAACTTGGTTCGTTCCCTTGTTGGTGATCGGATGTCTCTGTTGGCCCAAGCGATTTTTGGGTCTGTCTTTGCCTACACACTAGGACTTGTGCTCACATGGAGGCTTTCCATAGTGATGATTGCAGTGCAGCCATTAGTCATTGGAAGCTTTTACTCAAGAAGTGTCTTGATGAAGAGTATGGCAGAGAAAGCTCGTAAAGCCCAAAGGGAGGGAAGCCAACTTGCAAGTGAAGCTGTTATAAACCATAGAACCATAACTGCCTTCAGCTCCCAGAAAAGAATGTTGGCACTTTTCAAATCCACAATGATGGGGCCTAAAAAGGAGAGTATTAGGCAGTCATGGATTTCAGGGTTTGGTCTTTTCAGCTCCCAGTTCTTTAACACTTCATCAACAGCATTGGCTTACTGGTATGGTGGGAGGCTCTTGATAGATGAGCAGATAGAACCAAAGCACCTCTTCCAAGCATTTTTAATACTACTCTTCACAGCATACATTATTGCTGACGCTGGAAGCATGACTTCTGACTTGTCCAAAGGAAGCAGTGCAGTTGGATCAGTTTTTGCAATCCTAGACAGGAAAACTGAGATTGATCCTGAGACCACATGGGGAGGTGAGAAAAAGAGGAAAATAAGGGGCAGAGTTGAGCTTAAGAATGTGTTCTTTTCATATCCAACTAGACCTGATCAAATGATTTTCAAGGGTCTTAATCTTAAAGTTGAACCTGGGAAAACTGTAGCTCTAGTGGGGCACAGTGGTTGTGGTAAATCCACTGTTATTGGTCTTATTGAGAGGTTTTATGATCCTGCAAAGGGAACAGTATGCATAGATGAACAAGACATCAAGTCCTACAATTTGAGAATGCTGAGGTCACAAATTGCATTAGTGAGTCAGGAGCCAACCCTTTTTGCTGGCACAATTCGGGAAAATATCGCCTATGGGAAAGAAAACACAACTGAATCTGAGATAAGAAGGGCTGCATCTCTGGCTAATGCTCATGAATTCATAAGCGGAATGCATGACGGGTATGAGACATACTGTGGGGAAAGAGGAGTTCAGCTATCGGGAGGTCAGAAACAAAGAATAGCCTTAGCTAGGGCCATACTGAAGAATCCTGCAATACTGCTTCTGGATGAGGCTACTAGTGCACTTGATAGTGTTTCAGAGATCTTAGTCCAAGAAGCTCTAGAGAAGATAATGGTTGGAAGAACATGCATAGTAGTGGCACATAGGCTATCTACAATACAGAAATCCAACTACATTGCTGTGATTAAGAATGGGAAGGTTGTAGAACAAGGTTCACATAACGAATTGATTTCACTTGGACGTGATGGTGCATACTGTTCTCTTGTTAAACTTCAAAATGGTAGCTCCCCTAGGTAAACTTAATTAGTAGCTGTAATATATGGTAGTCTTGTAGTTTTTTCTCTTTTGCTTTTCTGAGACAACAACGTACAAGTTATTGTAGGGTAGGGGGGTTGCTCCTCCTGAAATTTAAGC 4010 0.4137 MGNNTMFRYADRLDKLLMFFGTLGSLGDGLQTPLMMYILSDVINAYGDKNSHLTKHDVNKVSLFNKISILLLYTTKCTYTSSTQLPPLQNLHKLVMQIAWLVLEKINVTTFHIVYQLMLVTTEGICWTRTAERQASRMRMEYLKSVLRQEVGFFDAQTAGSSTTYQVVSLISSDANTIQVALCEKIPDCMAYMSTFLFCHILAFVLSWRLTLAAIPLSVLFIVPALVFGKIMLDLAMKMIESYGVAGGIAEQAISSIRTVYSYVGENQTLNRFSSALQKTMEFGINQGFAKGLMLGSMGVIYISWGFQAWVGTFLISNKHEKGGHVFVAGFNVLMGGLSILSALPNLTAITEATVAVTRLFEMIDRVPTIDFEDKKGKALSYVRGEIEFQDIYFCYPSRPDTPVLQGFNLTVPAGKSIGLVGGSGSGKSTLIALLERFYDPVEGQILLDGHKINRLQLKWLRSQLGLVNQEPVLFATSIKENILFGKEGASMESVISAAKAANAHDFIVKLPDGYETQVGQFGFQLSGGQKQRIAIARALLRDPKVLLLDEATSALDAQSERVVQAAIDQASKGRTTIIIAHRLSTIRMAHLIAVLQAGRVVESGTHNELMELSDGEYAHMVELQQVTTQNDESKPSHLQIEGKSSHRMSIPQSPTVSFRSSTVGTPMLYPFSQGFSMGTPYSYSIQYDPDDDSFDDNLKRPNHPAPSQWRLLKMNAPEWGRAVLGILGAIGSGAVQPVNAYCVGTLISVYFETDKSEMKSKARVLALIFLGIGVFNFFTSILQHYNFAVMGERLTKRIREKILEKLMTFEIGWFDHEENTSASICARLSSEANLVRSLVGDRMSLLAQAIFGSVFAYTLGLVLTWRLSIVMIAVQPLVIGSFYSRSVLMKSMAEKARKAQREGSQLASEAVINHRTITAFSSQKRMLALFKSTMMGPKKESIRQSWISGFGLFSSQFFNTSSTALAYWYGGRLLIDEQIEPKHLFQAFLILLFTAYIIADAGSMTSDLSKGSSAVGSVFAILDRKTEIDPETTWGGEKKRKIRGRVELKNVFFSYPTRPDQMIFKGLNLKVEPGKTVALVGHSGCGKSTVIGLIERFYDPAKGTVCIDEQDIKSYNLRMLRSQIALVSQEPTLFAGTIRENIAYGKENTTESEIRRAASLANAHEFISGMHDGYETYCGERGVQLSGGQKQRIALARAILKNPAILLLDEATSALDSVSEILVQEALEKIMVGRTCIVVAHRLSTIQKSNYIAVIKNGKVVEQGSHNELISLGRDGAYCSLVKLQNGSSPR 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03726 1292 Gene3D - 377 626 IPR027417 -
Pste1g03726 1292 MobiDBLite consensus disorder prediction 628 659 - -
Pste1g03726 1292 CDD ABC_MTABC3_MDL1_MDL2 1047 1286 - -
Pste1g03726 1292 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 125 352 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste1g03726 1292 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 724 1011 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste1g03726 1292 SUPERFAMILY ABC transporter transmembrane region 6 371 IPR036640 GO:0005524|GO:0016020
Pste1g03726 1292 Gene3D ABC transporter type 1, transmembrane domain 5 637 IPR036640 GO:0005524|GO:0016020
Pste1g03726 1292 Pfam ABC transporter 1066 1214 IPR003439 GO:0005524
Pste1g03726 1292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 378 626 IPR027417 -
Pste1g03726 1292 Gene3D ABC transporter type 1, transmembrane domain 671 1034 IPR036640 GO:0005524|GO:0016020
Pste1g03726 1292 Pfam ABC transporter transmembrane region 18 337 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste1g03726 1292 Pfam ABC transporter transmembrane region 725 996 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste1g03726 1292 Gene3D - 1037 1290 IPR027417 -
Pste1g03726 1292 ProSitePatterns ABC transporters family signature. 1186 1200 IPR017871 GO:0005524|GO:0016887
Pste1g03726 1292 FunFam ABC transporter B family member 4 1037 1290 - -
Pste1g03726 1292 SUPERFAMILY ABC transporter transmembrane region 710 1030 IPR036640 GO:0005524|GO:0016020
Pste1g03726 1292 Pfam ABC transporter 405 554 IPR003439 GO:0005524
Pste1g03726 1292 MobiDBLite consensus disorder prediction 643 659 - -
Pste1g03726 1292 ProSitePatterns ABC transporters family signature. 526 540 IPR017871 GO:0005524|GO:0016887
Pste1g03726 1292 PANTHER ABC TRANSPORTER B FAMILY 5 782 IPR039421 -
Pste1g03726 1292 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1047 1283 IPR003439 GO:0005524
Pste1g03726 1292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1042 1286 IPR027417 -
Pste1g03726 1292 CDD ABC_6TM_Pgp_ABCB1_D1_like 18 360 - -
Pste1g03726 1292 CDD ABC_MTABC3_MDL1_MDL2 387 625 - -
Pste1g03726 1292 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 387 623 IPR003439 GO:0005524
Pste1g03726 1292 CDD ABC_6TM_Pgp_ABCB1_D2_like 713 1029 - -
Pste1g03726 1292 SMART AAA_5 414 600 IPR003593 GO:0016887
Pste1g03726 1292 SMART AAA_5 1074 1260 IPR003593 GO:0016887
Pste1g03726 1292 FunFam ABC transporter B family member 4 377 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03726 Pste-Chr1 18159322 18166025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03726 117 646 Calmodulin-binding Proteins AT2G36910 36.852 3.60e-97 338