LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste1g03706	AATACACTTGAGAAGCTGCAAAGACAAATTGATCGGACACTTGAAGACATCATCAATGAACACAAAGAGGCACAGTCAAAATCCAAAGAAGTACAAGGTGAAGCAGAGGAAGATTTGGTAGATGTTCTTCTAAAATTCCATGATGGTAATGATAGCGACCAGGATATGTGCTTAACTATTAACAATATCAAGGCTGTAATCCTGGACATCTTTACTGCCGGAGGGGAGACAGTAGCAACTACCATAAATTGGGCAATAGCAGAGTTGATAAAAAATCCAAGAGTAATGAAGAAAGCACAAGCTGAGGTGAGAGAGATATTCAATATGAAAGGAAAGGTTGATGAAATTTGCATCGATGAGCTAAAATATTTGAAATCAGTTGTGAAAGAGACCCTAAGGTTACACCCTCCCGCTCCCCTTTTACTTCCTAGAGAATGTGGACACACATGTGAGATTGATGGGTATCATATTCCAGTCAAAAGTAAGGTAATTGTTAATGCTTGGGCTATTGGAAGAGATCCAAACTATTGGACTGAACCAGAAAGGTTTTATCCAGAGAGATTCATTGATAGCTCTATTGACTATAAAGGAAATAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGCAGCACATTTGGTATGATAAATGTTGAGCTGACAATTGCAATTTTGTTGTCTCACTTTGATTGGAAACTTCCCAATGGAATGAAGAGTGAGGATTTGGACATGACTGAGCAATTTGGAGTCACTGTGAGAAGAAAGGATGACCTACATTTGATACCTGTCACTCATTGTCCATTCATGGTAAGATAA	828	0.3853	NTLEKLQRQIDRTLEDIINEHKEAQSKSKEVQGEAEEDLVDVLLKFHDGNDSDQDMCLTINNIKAVILDIFTAGGETVATTINWAIAELIKNPRVMKKAQAEVREIFNMKGKVDEICIDELKYLKSVVKETLRLHPPAPLLLPRECGHTCEIDGYHIPVKSKVIVNAWAIGRDPNYWTEPERFYPERFIDSSIDYKGNNFEYIPFGAGRRICPGSTFGMINVELTIAILLSHFDWKLPNGMKSEDLDMTEQFGVTVRRKDDLHLIPVTHCPFMVR	275

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste1g03706	275	FunFam	Os06g0641600 protein	1	265	-	-
	Pste1g03706	275	PRINTS	P450 superfamily signature	126	137	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pste1g03706	275	PRINTS	P450 superfamily signature	203	212	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pste1g03706	275	PRINTS	P450 superfamily signature	73	90	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pste1g03706	275	PRINTS	P450 superfamily signature	212	223	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pste1g03706	275	Pfam	Cytochrome P450	4	255	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pste1g03706	275	Coils	Coil	3	34	-	-
	Pste1g03706	275	PRINTS	E-class P450 group I signature	212	235	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pste1g03706	275	PRINTS	E-class P450 group I signature	62	79	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pste1g03706	275	PRINTS	E-class P450 group I signature	202	212	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste1g03706	Pste-Chr1	18028296	18029649	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste1g03706	3	266	Cytochrome P450	AT3G26300	48.699	1.49e-84	260

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