Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03706 AATACACTTGAGAAGCTGCAAAGACAAATTGATCGGACACTTGAAGACATCATCAATGAACACAAAGAGGCACAGTCAAAATCCAAAGAAGTACAAGGTGAAGCAGAGGAAGATTTGGTAGATGTTCTTCTAAAATTCCATGATGGTAATGATAGCGACCAGGATATGTGCTTAACTATTAACAATATCAAGGCTGTAATCCTGGACATCTTTACTGCCGGAGGGGAGACAGTAGCAACTACCATAAATTGGGCAATAGCAGAGTTGATAAAAAATCCAAGAGTAATGAAGAAAGCACAAGCTGAGGTGAGAGAGATATTCAATATGAAAGGAAAGGTTGATGAAATTTGCATCGATGAGCTAAAATATTTGAAATCAGTTGTGAAAGAGACCCTAAGGTTACACCCTCCCGCTCCCCTTTTACTTCCTAGAGAATGTGGACACACATGTGAGATTGATGGGTATCATATTCCAGTCAAAAGTAAGGTAATTGTTAATGCTTGGGCTATTGGAAGAGATCCAAACTATTGGACTGAACCAGAAAGGTTTTATCCAGAGAGATTCATTGATAGCTCTATTGACTATAAAGGAAATAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGCAGCACATTTGGTATGATAAATGTTGAGCTGACAATTGCAATTTTGTTGTCTCACTTTGATTGGAAACTTCCCAATGGAATGAAGAGTGAGGATTTGGACATGACTGAGCAATTTGGAGTCACTGTGAGAAGAAAGGATGACCTACATTTGATACCTGTCACTCATTGTCCATTCATGGTAAGATAA 828 0.3853 NTLEKLQRQIDRTLEDIINEHKEAQSKSKEVQGEAEEDLVDVLLKFHDGNDSDQDMCLTINNIKAVILDIFTAGGETVATTINWAIAELIKNPRVMKKAQAEVREIFNMKGKVDEICIDELKYLKSVVKETLRLHPPAPLLLPRECGHTCEIDGYHIPVKSKVIVNAWAIGRDPNYWTEPERFYPERFIDSSIDYKGNNFEYIPFGAGRRICPGSTFGMINVELTIAILLSHFDWKLPNGMKSEDLDMTEQFGVTVRRKDDLHLIPVTHCPFMVR 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03706 275 FunFam Os06g0641600 protein 1 265 - -
Pste1g03706 275 PRINTS P450 superfamily signature 126 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03706 275 PRINTS P450 superfamily signature 203 212 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03706 275 PRINTS P450 superfamily signature 73 90 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03706 275 PRINTS P450 superfamily signature 212 223 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03706 275 Pfam Cytochrome P450 4 255 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03706 275 Coils Coil 3 34 - -
Pste1g03706 275 PRINTS E-class P450 group I signature 212 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03706 275 PRINTS E-class P450 group I signature 62 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03706 275 PRINTS E-class P450 group I signature 202 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03706 275 PRINTS E-class P450 group I signature 82 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03706 275 PRINTS E-class P450 group I signature 166 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03706 275 PRINTS E-class P450 group I signature 125 143 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03706 275 Gene3D Cytochrome P450 1 264 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03706 275 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 205 214 IPR017972 GO:0005506|GO:0016705
Pste1g03706 275 SUPERFAMILY Cytochrome P450 4 266 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03706 275 PANTHER OS08G0105600 PROTEIN 3 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03706 Pste-Chr1 18028296 18029649 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03706 3 266 Cytochrome P450 AT3G26300 48.699 1.49e-84 260