Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste1g03703 | ATAGAACAACTTCACTTCTCAATTCTCATGCTGTGTGTCAGAATACTGCACATATATTCCATACTAATCCCAATCCAATCATTCCCTCTCTTCTCGCCATTTCACTCACTCAAAACCAAAGCCTACCCCAAATCAAGAACAACAAAGTGTGTGTTGCTTGGGATAGCTTTAATCTCAACACCAACCTCCATTGAAGAAAAAAAAAACACCTTTATTACTTTGGAATTCTTGTCTTGGAAAACTATAAACTTTAGTTCATTAGGTCAAAAATTATTTTTTTTTTTCCTGAAAATTTTGGTTTTTCAGTCATATTTTTCTCCACACCACCATGGCTACAACCATAACAGAGCAAGAAGTCTCGTCACGTGCCACGCACGTGCCCGACTTCACGACCACAACCTCAGACGAGGACACGGAGGAGGACGAGGAGGGAGAACAAATACACGACGAGACCGATCGTTGCGGCGGAGGGTGGGGGCTAGCGGCGGCGTGCGGAGGAGCGCGGCGGAACGGTGGAGGGGCTTTGGGGAGGGTGCTGGACCCGAGGGCGAAGTGGGTCCAGGAATGGAACAGGGTGTTCCTGCTAGTGTGCGCCGCGGGGCTCTTTGTCGACCCTCTATTCTTCTACGCGCTCTCCGTTAGTGACTCGTGCATGTGCGTCTTTATTGACGGCTGGCTCGCCGTTAGCGTGACGGTGCTGCGGTGCATGACGGACGCGCTGCACGTGTGGAACATGGTGTTGAGAATGAAGATGGCCAAACGCACGTTTGGCTTGGGCGCCTCCGCCGCCTCGGCCGGAGCCTCCACCGGACTCAGAGACACGCGGCCGCGCTCCGTCGCGCTTGGGTATCTCAAGTCACGGACCGGATTCTTTTTTGACTTGTTCGTTATTCTTCCTTTACCTCAGATTTTGCTTTGGGTGGCAATCCCCTCATTGTTGGAGAAAGGTTCAGTGACGCTAGTGATGACAGTGTTCTTAATTATATTTCTATTCCAATACCTTCCCAAAATTTATCATTCTGTTTGCCATCTGCGACGCACACAAAACCTCTCTGGCTACATTTTTGGAACTGTTTGGTGGGGAATCGCCCTTAACATGATCGCCTATTTTGTTGCTTCCCATGCAGCAGGAGCGTGTTGGTACTTACTAGGGATCCAAAGAGCAGCCAAGTGTCTAAAAGTTGAGTGTGGAAAAACAAGTGGCTGTGGCCCGAAAATTCTCTCATGTCAAACACCAATATACTATGGAAGCAACAATTTGATAGTTAGGGATAGGGCAAGGTTGGCATGGGCAGAGAACAGGCAAGTGAGGCACACGTGCTTAAGTGGTCCTGATAACTTCTATGGAGCTTATAGATGGACTGTTCAGCTTGTCACTAATGATAATCGATTAGAAAAGATACTCTTCCCTATCTTCTGGGGCCTAATGACTCTCAGCACTTTCGGAAACCTAGAGAGTACAACTGAATGGCTAGAAGTAGTTTTCAACATCATTGTGCTGACCAGTGGCCTTCTCCTTGTCACTATGTTAATCGGAAACATCAAGGTATTTTTGCATGCAACAACCTCAAAGAAGCAAGCAATGCAATTGAAGATGAGGAACATTGAATGGTGGATGAGGAAACGACGATTGCCACAAGGGTTTAGGCAACGTGTGCGTAACTATGAGAGGCAACGTTGGGCAGCTATGCGTGGGGTTGATGAATTTGAAATGACCAAAAACCTCCCTGAGGGATTAAGAAGAGACATCAAGTACCACCTTTGTCTAGACTTGGTGAGACAGGTACCTTTGTTTCAGCACATGGACGATCTGGTTCTAGAGAACATCTGTGACCGTGTGAAGTCTCTTATATTCACAAAGGGAGAAATAATAGCTAGAGAAGGAGACCCAGTTCAGAGAATGCTATTTGTAGTAAGGGGTCACCTTCAAAGTAGCCAAGTCCTAAGAGATGGTGTGAAGAGTTGCTGCATGTTAGGGCCAGGAAACTTCAGTGGTGACGAGCTCCTTTCATGGTGTTTAAGGAGACCCTTCATAGAACGCCTTCCACCATCATCATTCACACTCATTACATTGGAAACCACAGAGGCATTCGGACTTGATGCTGAGGATGTGAAGTATGTGACACAACATTTCAGGTACACGTTTGTGAAGGAAAAGGTGAAGAGAAGTGCAAGATATTACTCACCAGGTTGGAGAACTTGGGCTTCTGTGGCCATTCAATTGGCATGGAGGAGGTACAAGCATAGGTTGACTTTGACTTCTTTGTCTTTTATAAGACCTAGGAGGCCATTGTCAAGGTCTTCTTCTATGGGAGAGGATAGGCTTCGCCTCTACACGGCTTTGTTAACCTCCCCAAAGCCTAATCAAGATGATTTTGACTTTTGAAATCATGTTGTGGATGTGGCATGCATGTGCATGGGTGTGGAATTTTATTGTTTGATTCATCTTATAGAAGAAAGTACAGAAAAATGCGTGCATGTTTTATGCAATATTGTGTTCATTATCATTAGAAGAAATTATTCATTTGATTTCTGTACAATGCTACAAGTTTTATCTTTTCCTCCCAATACTTAAAA | 2577 | 0.456 | MATTITEQEVSSRATHVPDFTTTTSDEDTEEDEEGEQIHDETDRCGGGWGLAAACGGARRNGGGALGRVLDPRAKWVQEWNRVFLLVCAAGLFVDPLFFYALSVSDSCMCVFIDGWLAVSVTVLRCMTDALHVWNMVLRMKMAKRTFGLGASAASAGASTGLRDTRPRSVALGYLKSRTGFFFDLFVILPLPQILLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLKVECGKTSGCGPKILSCQTPIYYGSNNLIVRDRARLAWAENRQVRHTCLSGPDNFYGAYRWTVQLVTNDNRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRRLPQGFRQRVRNYERQRWAAMRGVDEFEMTKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGEIIAREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSFTLITLETTEAFGLDAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWASVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRSSSMGEDRLRLYTALLTSPKPNQDDFDF | 685 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste1g03703 | 685 | FunFam | Cyclic nucleotide-gated ion channel 1 | 415 | 479 | - | - | |
Pste1g03703 | 685 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Pste1g03703 | 685 | SUPERFAMILY | Voltage-gated potassium channels | 72 | 409 | - | - | |
Pste1g03703 | 685 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Pste1g03703 | 685 | Gene3D | Jelly Rolls | 486 | 604 | IPR014710 | - | |
Pste1g03703 | 685 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 43 | 650 | - | - | |
Pste1g03703 | 685 | Gene3D | Helix hairpin bin | 413 | 479 | - | - | |
Pste1g03703 | 685 | SUPERFAMILY | cAMP-binding domain-like | 414 | 602 | IPR018490 | - | |
Pste1g03703 | 685 | CDD | CAP_ED | 488 | 594 | IPR000595 | - | |
Pste1g03703 | 685 | Pfam | Cyclic nucleotide-binding domain | 509 | 596 | IPR000595 | - | |
Pste1g03703 | 685 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 488 | 598 | IPR000595 | - | |
Pste1g03703 | 685 | MobiDBLite | consensus disorder prediction | 24 | 38 | - | - | |
Pste1g03703 | 685 | FunFam | cyclic nucleotide-gated ion channel 4 | 486 | 604 | - | - | |
Pste1g03703 | 685 | Pfam | Ion transport protein | 80 | 405 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste1g03703 | Pste-Chr1 | 17992852 | 18004182 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste1g03703 | 51 | 684 | Ion Channels | AT5G54250 | 77.570 | 0.0 | 1010 |