Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03686 GAACAGTACAGAACAAATTAATAAATTCCTGAAGTTGAAATATGAAGCCATATTTGCACCCAGAAAGATCAAAAGTATATTTTGCATGATCAATTGAAGAGGAAGGTAAAATCATGAGCCGGAACATGAACAATTTCGCACCTTTATCAGGGCCTTGGCAAAGAAGTTTCAGATCCTTTGATGGTCACACTTTCAGTCATCATGAATCCAATGAAGTGCCTGTGTTTTACAGATCTCACTCTACTCATGCCACCGAAGACAGAAGTTCTGGTGTATTAGCTCGACAACGGTTTTGGGACTTCACAAATCCTTTAGGATTCGACAGTATACCAAATTTTCCAGAACCAGCGCCTAGAAGACGACAAATTCATGTCCACAACGATGATATGGGAAGGCTCAGAGACATTTTCCTTGAGCCACCTCCAAGATCCTCATTCCAACCAAGTACACAAGCTCCACCAGTGGTAGAAATTTCCAAATCAACAGCTTTGAGCAAGCTTAAGAAAGTAATATATAACCCTCCAACGAGGTATGCTAGGAGGGTGAGCTTATATTATAGAAATAATGTTGCAAAAGCTTCCAAAGAGAAGAAAAAAGAAAAGGATGAAGATAGCATGCGTTGTGCTGTTTGCTTGGAAGATTTTGAGGCTAATGAAGAGGTGATGCTCACTCCATGCAAGCACATGTTTCATGAGGATTGCATATTGCCATGGCTTACAAGCAAGGGGCAGTGCCCAGTTTGTAGGTCTGTGATCTGTGGGAGAGGGAGGAGGGAGAATCCTTCATCCTTCAACAACGATAACATTGCAAATTTAGAACCTGAAAACCTCATTAATGGAGAGTTTCTGTCAATTTTTAGGGCCATGGAAGAAGCTTTTCAATTGGGTAGCACGGCTTACTAACGTACACATAAGAATTTATTTGTTGGTTACACATGAATGTTTTCTCTTTTTTGGTACAGCATATACTACATGATATTTGATAGGCAAAATTTCTGACTTGTGAGTGTGATGTCGGAAATGATAGATTGGAAACCAACTTGTTATTTTAAACACTAGTATCATAATCCATGCATTCAACGACAG 1085 0.3963 MSRNMNNFAPLSGPWQRSFRSFDGHTFSHHESNEVPVFYRSHSTHATEDRSSGVLARQRFWDFTNPLGFDSIPNFPEPAPRRRQIHVHNDDMGRLRDIFLEPPPRSSFQPSTQAPPVVEISKSTALSKLKKVIYNPPTRYARRVSLYYRNNVAKASKEKKKEKDEDSMRCAVCLEDFEANEEVMLTPCKHMFHEDCILPWLTSKGQCPVCRSVICGRGRRENPSSFNNDNIANLEPENLINGEFLSIFRAMEEAFQLGSTAY 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03686 262 SUPERFAMILY RING/U-box 161 215 - -
Pste1g03686 262 ProSiteProfiles Zinc finger RING-type profile. 170 211 IPR001841 -
Pste1g03686 262 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 138 215 IPR013083 -
Pste1g03686 262 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 48 212 - -
Pste1g03686 262 Pfam Ring finger domain 169 211 IPR001841 -
Pste1g03686 262 SMART ring_2 170 210 IPR001841 -
Pste1g03686 262 SMART ringv_2 169 211 IPR011016 GO:0008270
Pste1g03686 262 FunFam RING/U-box superfamily protein 154 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03686 Pste-Chr1 17824624 17826533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03686 126 259 C3H Transcription Factor Family AT3G58720 46.429 2.80e-36 127