Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03680 GAAGCAAAGAATCTTGAAGCCATAGTTATCACACAATATCCGTGCAAATTTCTGAAAGCAACACTAAGAGGTGATGCTCTATCAAAAATGGATCATCTCAAGTTACTAATACTTGAGAATGTGAATTTTTCAGGAGTTCTCAATCATCTTTCTAATGAATTAAGATATTTATCTTGGGATAAATATCCTTTCACTTCTTTGCTATCTAGTTTTCATTCCAATCAACTTGTAGAATTGATCCTGCCTTATAGCAATATCAAACAATTATGGAAAGGCACAAAGTATCTGCCAAAATTGAGAAGTCTAAATCTCAAGCATTCCAAAAATCTCATTCAAATGCCAGACTTAAAAGGAGTTCCACATCTTACGTATCTTGATCTTGAAGGATGTCTAGAAATCGTGCGGATCGATCCATCTATTGGTATTCTAAAAGAGCTTGTTGATTTGAACTTGAAAGATTGTAAAAATCTTGTTCATAATCTGAATATCATTTTTGGACTTAGTTCACTTAGGTGCCTTGATCTTTCGGGCTGTTCAAAATTACTTAATAATTTAGTGTTGGAGAAACCAAGAGAGACAGAACATTTGAAGAAAGTTGATAATGATAGAAGTGTCATCCAATTATCACCATCCTCTCTGTACAAAGTTTTGATGTTTCCTTTCCATTTTCTTTCCTCCCAAAAACGGGAAGATTCACTTGGTTTGTTGGTGCCTTATTTGTCTCGTTTTCCATGTTTGCTTCATCTTGATCCGAGTTTCTGCAATCTATTACAAATTCCTGATGCCATTGAGAACTTACATTCTCTAGAAGAATTATTTTTGGGGGGAAACAATTTTAAATTTGAACTTGGAGCACTGCAAGCAGTTGAAATATTTGCCCGAGCTTCACCAGAAGAAAAAACAACTGGCACACATTACGGGCAAGTAGACATTTTTGATTGCCCAAAGTTGATTGACTTGGAACACTGTTATAGTGTGATTTTTTCTTGGTTGATTCAAAACCTTGAGGTTTATTTGCAACCATCTATTTCCTGGGGTAGGATAGATATTGTTATTCCTGGAACTCAAATTCCGAAGTGGTTTAAAGAACAAAATGAGGGTAGTTCTATAAGCATGGACCCACCTTCCTCACTCATGGACAACCCAAATTGGATAGGTGTTGCTTGTTGTGCACTATTTGTGACACATGATGATCCTACTAGTTTGGGTGATGAATGGCTAAACACTGATGATCTTTGTATTGGATACAATGTTCAAAAAAAAGAAGATTGGCCAAAATCATTTATCAATGTTCCAATACATTTCAAAAAAGATCTAATCACGGTTGAATTAGATCACTTGATCATAGCGATTTACTCTCGGGAAGCATTCATTAGTAGTCTAGAGGATACAGTATCTCTTGATAACATTGTATTCAAAACTTACGTTTTTGAGCCTCAAGGTTTACATTTGGATGTGAAGAACTGTGGATATCGTTGGGTATTTAAGGATGATCTTCAACAATTAAATCCAAACATGATGTTTAGCACAAGTTCTTCATCTCGGAAGCGGAAGCTTTTAACAAATGATTAA 1572 0.3524 EAKNLEAIVITQYPCKFLKATLRGDALSKMDHLKLLILENVNFSGVLNHLSNELRYLSWDKYPFTSLLSSFHSNQLVELILPYSNIKQLWKGTKYLPKLRSLNLKHSKNLIQMPDLKGVPHLTYLDLEGCLEIVRIDPSIGILKELVDLNLKDCKNLVHNLNIIFGLSSLRCLDLSGCSKLLNNLVLEKPRETEHLKKVDNDRSVIQLSPSSLYKVLMFPFHFLSSQKREDSLGLLVPYLSRFPCLLHLDPSFCNLLQIPDAIENLHSLEELFLGGNNFKFELGALQAVEIFARASPEEKTTGTHYGQVDIFDCPKLIDLEHCYSVIFSWLIQNLEVYLQPSISWGRIDIVIPGTQIPKWFKEQNEGSSISMDPPSSLMDNPNWIGVACCALFVTHDDPTSLGDEWLNTDDLCIGYNVQKKEDWPKSFINVPIHFKKDLITVELDHLIIAIYSREAFISSLEDTVSLDNIVFKTYVFEPQGLHLDVKNCGYRWVFKDDLQQLNPNMMFSTSSSSRKRKLLTND 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03680 523 Pfam C-JID domain 352 499 IPR045344 -
Pste1g03680 523 Gene3D Ribonuclease Inhibitor 223 292 IPR032675 -
Pste1g03680 523 Gene3D Ribonuclease Inhibitor 14 207 IPR032675 -
Pste1g03680 523 Pfam Leucine Rich Repeat 75 94 IPR011713 -
Pste1g03680 523 SUPERFAMILY L domain-like 24 280 - -
Pste1g03680 523 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 183 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03680 Pste-Chr1 17758843 17760767 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03680 25 274 WRKY Transcription Factor Family AT4G12020 34.965 1.60e-25 109