Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste1g03671 | CTTACATTAGTGGTCGATTTCAACTCCATAACTTCCCAAATGCCTTGTTTATTAACCCTTGTCACTTTTTTCTTCATATTATTATTGTTACTGAAAAGTGTGAGGAACCTTAAGAAAAGAGAATCAACTCCAAATATTCCTCCAGGACCATGGAAGTTACCTATTATAGGAAATATACATCAAGTTCTTGCATCCACACCACATCAAAAGTTAAGAGACATGGCCAAAATATATGGACCTTTGATGCATCTTCAACTTGGAAAAATGACCACAACCATTGTTTCCTCACCCGCGTATGTTAAGGAAATAATGAAAACCCATGATGTCATCTTTTCTTCAAGGCCTCAAAGTGCAGTTTTCGATATACTGTACTATGAATCCACAGGTCTTGCTTCTGCACCTTATGGAAATTATTGGAGACTGTTACGAAAGATGTGCACAATAGAGCTTTTCACCCAAAAGCGTGTCAATTCTTTCCAACAAGTAAGACAAGAAGAGCTTGTCAATCTCATAAAAATTATTGATTCACAGAAAGGATCACCCGTCAATCTTTCTCAGATGGTGCTTTCATCAATATATTCCATCACCTCAAGAGTTGCGTTTGGCAAGAACTACAAAGGCCAAGAAGAATTCATATCATTGGTGAAAGAAGAAGTTGAAATTGCTGGAAGAGAACTGTATTCTTCTACAAGATGGCTTCAACTTGTCACCGGTTTTAGGGCTAAGCTTGAGAGGTTGCATAGACAAATGGATCGGATTCTAGAAAACATCATCATTGAACATAAAGAGGCAAAGTCAAGAGCTAAGGAAGTCCAAAGTGAACAAAAGGATGAAGATTTGGTAGATATTCTCCTGAAATTTCAGAATATTAATCATGGTAACAAGGATATTTGTTTAACTAATGACAATATCAAGGCTATAATCCAGGACATCTTTGTTGGTGGAGGTGACACATCTGCAATTACCATCGATTGGGCAATGGCTGAGATGGTAAGAGATCCAAGAGTGATGAAGAAGGCACAAAATGAAGTGAGAAGAGTATTCAATATGACAGGTAATAGAGTTGATGAGACATGCATTAATGAACTCAAATATTTGAAATCAGTTGTGAAAGAGACCCTAAGATTACATCCTCCACTCCCTCTTGTTCCAAGAGAATGTAGACAAGCATGTGAGATTCGTGGGTATCACATACCAATCAAAAGTAGTATTGTAGTTAATGTTTGGGCAATTGGAAGAGATCCAAAGTTTTGGAGTGAAGCAGAGAGGTTTTATCCAGAGAGATTCATTGATAGCTCTATTGACTACAAAGGGGCTAATTTTGAGTATATTCCATTTGGTACTGGAAGAAGAATGTGCCCAGGCATCACATTTGGTTTGATAAATGTTGAGGTGGCACTTGCATTGCTGTTGTATCACTTTGATTGGATGCTTCCCAATGGAATGAAAAATGAGGACTTAGACATGACTGAACAATTTGGAGCATCTGTGAGAAGAAAAGATGATCTGTACTTAATTCCAGTCACTTCTTCTCCTTAA | 1539 | 0.3756 | LTLVVDFNSITSQMPCLLTLVTFFFILLLLLKSVRNLKKRESTPNIPPGPWKLPIIGNIHQVLASTPHQKLRDMAKIYGPLMHLQLGKMTTTIVSSPAYVKEIMKTHDVIFSSRPQSAVFDILYYESTGLASAPYGNYWRLLRKMCTIELFTQKRVNSFQQVRQEELVNLIKIIDSQKGSPVNLSQMVLSSIYSITSRVAFGKNYKGQEEFISLVKEEVEIAGRELYSSTRWLQLVTGFRAKLERLHRQMDRILENIIIEHKEAKSRAKEVQSEQKDEDLVDILLKFQNINHGNKDICLTNDNIKAIIQDIFVGGGDTSAITIDWAMAEMVRDPRVMKKAQNEVRRVFNMTGNRVDETCINELKYLKSVVKETLRLHPPLPLVPRECRQACEIRGYHIPIKSSIVVNVWAIGRDPKFWSEAERFYPERFIDSSIDYKGANFEYIPFGTGRRMCPGITFGLINVEVALALLLYHFDWMLPNGMKNEDLDMTEQFGASVRRKDDLYLIPVTSSP | 512 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste1g03671 | 512 | Coils | Coil | 254 | 274 | - | - | |
| Pste1g03671 | 512 | FunFam | Cytochrome P450 71D8 | 39 | 507 | - | - | |
| Pste1g03671 | 512 | Gene3D | Cytochrome P450 | 36 | 503 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste1g03671 | 512 | CDD | CYP71-like | 78 | 503 | - | - | |
| Pste1g03671 | 512 | Pfam | Cytochrome P450 | 47 | 493 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste1g03671 | 512 | PRINTS | E-class P450 group I signature | 407 | 431 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste1g03671 | 512 | PRINTS | E-class P450 group I signature | 323 | 349 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste1g03671 | 512 | PRINTS | E-class P450 group I signature | 367 | 385 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste1g03671 | 512 | PRINTS | E-class P450 group I signature | 443 | 453 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste1g03671 | 512 | PRINTS | E-class P450 group I signature | 75 | 94 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste1g03671 | 512 | PRINTS | E-class P450 group I signature | 453 | 476 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste1g03671 | 512 | PRINTS | E-class P450 group I signature | 191 | 209 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste1g03671 | 512 | PRINTS | E-class P450 group I signature | 99 | 120 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste1g03671 | 512 | PRINTS | E-class P450 group I signature | 303 | 320 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste1g03671 | 512 | PANTHER | OS08G0105600 PROTEIN | 70 | 510 | - | - | |
| Pste1g03671 | 512 | PRINTS | P450 superfamily signature | 444 | 453 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste1g03671 | 512 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste1g03671 | 512 | PRINTS | P450 superfamily signature | 314 | 331 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste1g03671 | 512 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 446 | 455 | IPR017972 | GO:0005506|GO:0016705 | |
| Pste1g03671 | 512 | SUPERFAMILY | Cytochrome P450 | 47 | 507 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste1g03671 | Pste-Chr1 | 17652945 | 17654819 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste1g03671 | 20 | 508 | Cytochrome P450 | AT3G26300 | 42.659 | 1.59e-132 | 392 |