Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03669 CGCTTCGTAATTCGTAATTCATTTTGTGTTGAAAGAAGAACAAGATTAGGGAGAAGAAAGAAAGACGAAGAAGAGGTAGAGAAAGAGAAAGAGGGTGGAGATCTTGTAAATAAGGAAACCCTAGTTTTTCCTTTTTTGGGCTTATTTTTCTAAATTTTCTCATTAATTTTCAGCTACAACCTGCTACTGTTACCAATAAGGAATCTCTTGTCATTGCTTCAATCGAACAAGAGTGAACGAGTTTTGTGGGATTGTGGATTATTAGGAAGCCGCAAAGATGATGTCCAGGTCGTATACCAATCTTTTAGATTTGGCATCCGGGAATTTCCCGGCAATGGTGAGGGAGCCCCGGGAACGGAGGCGGTTGCCGAGGGTTATGAGTGTTCCGGGGTTTCTCACTGAGATAGATGATGATCAGGCAGTTAGTGTTTCCTCTGATAATCCGTCAACTGTTACTACGGATAGAATGATCATTGTGGCTAACCAGCTACCTTTGAAGGCAAAGCGAAAAGAGGACAACAAAGGGTGGAGTTTCAGTTGGAATGACGATTCGTTGCTTTTACAGCTTAAGGATGGACTTCCGGATGACATGGAAGTTCTTTATGTTGGGTCATTGCGTGTGGACATTGATCCAGCGGAACAGGATGATGTATCACAGTATTTATTGGATAAATTCAAATGTGTCCCGACTTTTCTACCTGCTGATGTATTGGCAAAATTTTATGATGGCTTCTGTAAAAGGCAATTATGGCCTCTTTTTCATTACATGTTGCCATTTTCAACAGATAAAAGCCACCGATTTGATCGCACCTTGTGGGAAGCGTATGTGCTGGCAAACAAGCTATTTTTTCAGAAAGTTATTGAAATAATAAACCCAGAGGATGACTACATTTGGATTCATGATTATCATTTGATGGTGCTGCCAACTTTTATAAGAAGGCGATTTAACAGGGTTAAAATGGGTTTTTTCTTGCATAGCCCCTTTCCATCATCAGAGATATATAGGACTCTTCCGGTCAGGGAAGAGATACTGAAAGCTTTACTAAACTCTGATATCATTGGATTTCATACCTTTGACTATGCTCGACATTTCCTTTCCTGTTGCAGTCGAATGTTGGGTCTTGAGTATCAGTCTAAGAGGGGCTATTTAGGATTGGAGTATTATGGAAGGACAATCAGTATCAAGATTATGCCTGTTGGGATTCACATGGGTCGGATTGAATCAGTTATGAGGATGGCAGATGAGGAGTGTAAGGTAAGGGAGCTCAAACAGCAATTTGAAGGAAAAGCCATCCTGCTTGGTATTGATGATATGGACATTTTTAAAGGCATAAATTTGAAGATTTTGGCTATGGAGCAGATGCTCAGACAACATCCCAAATGGCAAGGGAGGGCTGTGCTTGTTCAAGTAGTTAATCCTGCTAGAGGTAAAGGGATACATCTGGAGGAGATACATGCTGAAATTCAAGAAAGCTGCACCAGAATCAACAGAGTGTTTGGACGACCTGGATATGAACCTATTGTTTTTATTGATAGAGCAGTTCCTATTGCTGAAAAAGTTGCCTATTACAGCCTTGCTGAGTGTGTTATTGTCACAGCTGTGAGGGATGGAATGAACTTAACTCCTTATGAATATATTGCATGCAGACAGGGACTGCCTGGTTCTGAATTATGTTCCAATGTCAATGAGCCAAAGAAGAGTATGCTAGTAATATCAGAATTTATTGGGTGTTCTCCATCGCTTAGTGGGGCAATCCGTGTCAATCCATGGAATGTTGAAGCAACTGCAGAGGCAATGAATGAGGCCATCTCAATGGGTGATGGAGAGAAACAGTTGCGGCATGAGAAGCATTATCGGTATGTCAGCACTCATGATGTGGCTTACTGGTCACGTAGTTTCTTGCAAGACATGGAGCGGGCTTGCACTGACCTTCTAAGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTAGAGTTGTGGCACTTGACCCTAATTTTAAGAAGCTCTCAATTGATGCTATGGTTTCATCTTACAAGAGGACAAACAGTAGGGCCATTTTGTTGGACTATGATGGTACTGTGATGCCACAGAACTCCATTAACAAGAGTCCAAGCAAGGAGGTGTTGTCTCTTTTGGAATCACTTAGTGCAGACCCCAAAAATGTTGTTTTCATTGTTAGTGGACGCGGGAGGAATAGCTTAAGTGACTGGTTTGCTCCGTGTGAAAAACTTGGAATTGCTGCCGAACATGGGTACTTCTTGAGATGGGCCCGTGATGATGGAGCATGGGAGATTTGTGGCAAATACTCCGACTTTGGATGGATGCAGATTGCTGAACCTGTAATGAAACTATATACAGAGGCGACTGATGGTTCCTCAATTGAAAGAAAAGAAAGCGCTTTGGTCTGGCAGTACCGTGATGCAGACCTTGGTTTTGGATCTGCTCAGGCTAAGGAAATGCTAGATCATTTAGAAAGTGTTTTGGCCAATGAGGCTGTTGCTGTAAAGAGTGGACAGTTTATTGTTGAAGTAAAACCCCAGGATGTAAGCAAAGGCTTAGTTGCCGAAAGGATATTTTCGTCAATGGATGGAAAGAGCAAACGTGCTGATTTTGTGCTTTGTGTTGGTGATGACAGATCGGATGAGGACATGTTTGAAATAGTTAGTGGTGCCATCTCAAGGAATATTCTTGCCACCAATGCTTCTGTGTTTGCTTGCACAGTTGGACAAAAACCAAGCAAAGCAAAGTATTATCTTGATGATACAACTGAGGTAATAAGCATGCTAGAATCTTTGGCTGAAGAATCAGATTCTTCACCCTACATAGAAGGTGAACTATAGAAGAAGAAACTGGGGATTCCTCTTGGAGCTAAGTGTGAGTTGAGGTTTCTCTGATTTAGGTCATGATTATTTTTTTTTTTTTTTAATTGGGCTGTAATATTCGTGGTGACATCTGGGGCGTTTGCAGGGTATGTTTTCATAATTTTTTATACTTTTTTTTTTTTGCTTTTCTTTCATCTATTATATATTACATATATTTTTGGGAGAATCCCGTCATTATTTTTTGTTCCTTCCATTGATAATTTTATTATTGTAGTTGTGGAGTAGCAGATAAAGATGTGAATTTGGTTTCTATATCCTA 3146 0.4069 MMSRSYTNLLDLASGNFPAMVREPRERRRLPRVMSVPGFLTEIDDDQAVSVSSDNPSTVTTDRMIIVANQLPLKAKRKEDNKGWSFSWNDDSLLLQLKDGLPDDMEVLYVGSLRVDIDPAEQDDVSQYLLDKFKCVPTFLPADVLAKFYDGFCKRQLWPLFHYMLPFSTDKSHRFDRTLWEAYVLANKLFFQKVIEIINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMRMADEECKVRELKQQFEGKAILLGIDDMDIFKGINLKILAMEQMLRQHPKWQGRAVLVQVVNPARGKGIHLEEIHAEIQESCTRINRVFGRPGYEPIVFIDRAVPIAEKVAYYSLAECVIVTAVRDGMNLTPYEYIACRQGLPGSELCSNVNEPKKSMLVISEFIGCSPSLSGAIRVNPWNVEATAEAMNEAISMGDGEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSSYKRTNSRAILLDYDGTVMPQNSINKSPSKEVLSLLESLSADPKNVVFIVSGRGRNSLSDWFAPCEKLGIAAEHGYFLRWARDDGAWEICGKYSDFGWMQIAEPVMKLYTEATDGSSIERKESALVWQYRDADLGFGSAQAKEMLDHLESVLANEAVAVKSGQFIVEVKPQDVSKGLVAERIFSSMDGKSKRADFVLCVGDDRSDEDMFEIVSGAISRNILATNASVFACTVGQKPSKAKYYLDDTTEVISMLESLAEESDSSPYIEGEL 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03669 855 CDD HAD_TPP 594 834 - -
Pste1g03669 855 FunFam Alpha,alpha-trehalose-phosphate synthase 317 530 - -
Pste1g03669 855 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 56 315 - -
Pste1g03669 855 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 592 710 - -
Pste1g03669 855 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 550 - -
Pste1g03669 855 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 31 843 IPR001830 GO:0003824|GO:0005992
Pste1g03669 855 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 723 854 - -
Pste1g03669 855 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Pste1g03669 855 Pfam Trehalose-phosphatase 596 831 IPR003337 GO:0003824|GO:0005992
Pste1g03669 855 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Pste1g03669 855 FunFam Trehalose-6-phosphate synthase 2 677 756 - -
Pste1g03669 855 Gene3D Glycogen Phosphorylase B; 56 316 - -
Pste1g03669 855 Gene3D - 592 683 IPR023214 -
Pste1g03669 855 Gene3D - 722 850 IPR023214 -
Pste1g03669 855 NCBIfam HAD-IIB family hydrolase 595 801 IPR006379 -
Pste1g03669 855 NCBIfam trehalose-phosphatase 592 842 IPR003337 GO:0003824|GO:0005992
Pste1g03669 855 Gene3D Glycogen Phosphorylase B; 317 530 - -
Pste1g03669 855 SUPERFAMILY HAD-like 593 842 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03669 Pste-Chr1 17638464 17643528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03669 1 855 Trehalose Biosynthesis Gene Families AT1G06410 77.193 0.0 1368