Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03633 CAAAAAAAGAAAATCCAAAGGGGAAAAAAAATTAAAATTCTCTACCTCATGCATATCAGATTCTCAGGTTTGGATAAAACCGAAAAGATAAACTTTGGAGTAAGAAAGACACACAGAAAGAAAGAGAGAGAAAAGAAAAGCGAAGAAGGTTCACGTTCAGGTTTCAGGTTCACTTTCACGAGCCTATCACCGACCCTCTGCACCTGCAACTTCCAACTTCAACTTCAACCACTGCAAGCTCTAAAAGAAAAAGAGAAAAATATCCCCATTTGGTTTGGTTGGTGAAAGTTGAGACCTTTTCACGGGCTCAAGTAGTAGCTTTAACCTGGTCTCTTTTTTCAGCATCCACCCTCGTATTGTTTTGCAAAGATCTGATCTGGGTCGTGGATATTCCAATGTGAAAGTTAAGGTTTTTTGTTGGAGTGTTGGTGTTTTTGGTGCATAGTAATAGAAAAATGTGGGATTTTTAAAGGTTTGGAGATGGATCGTTCTGTTATGACTGCGGGGCCAGGAATGGATATGCCGATCATGCATGACAGTGACAGGTATGAGCTGGTCCGTGATATTGGGTCTGGGAATTTTGGGGTGGCAAGGCTCATGAGGGACAAGCACACAGAGGAGCTTGTTGCTGTCAAGTATATTGAGAGAGGTGATAAGATAGATGAAAATGTACGAAGGGAAATTATAAATCACAGATCACTGAGGCATCCCAATATTGTCAGGTTCAAGGAGGTCATATTAACCCCTACACATTTGGCTATTGTGATGGAATTTGCCTCTGGAGGAGAGTTATTTGAGCGAATATGCAATGCAGGACGATTTAGTGAAGATGAGGCTCGCTTCTTCTTCCAACAACTTATATCAGGTGTTAGCTACTGTCATGCAATGCAAGTATGCCATCGCGACTTGAAGTTGGAGAACACATTATTGGATGGTAGTCCAGCTCCTCGTTTGAAGATTTGCGATTTTGGGTATTCAAAGTCCTCAGTGCTACATTCACAACCAAAATCTACAGTTGGTACCCCTGCATACATCGCTCCTGAAGTTCTGCTTAAGAAGGAGTATGATGGCAAGATTGCAGATGTATGGTCTTGTGGGGTGACCTTATATGTCATGTTGGTGGGTGCATATCCATTTGAGGATCCAGAGGAACCTAAAAATTTTCGCAAGACAATTCATAGGATTTTGAAAGTCCAGTACTCAATTCCTGATTATGTTCATATCTCTCCTGAGTGCCGTCATCTAATCTCAAGGATCTTTGTTGCAGACCCTGCACAGAACCTTCCGGCAGATCTGATGGTGGAGAACAACACGATGAACAACCAGTTTGAGGAGCCTGATCAGCCAATGCAGAGCATTGAAGAAATCATGCAGATTATCAGTGAGGCTACAATTCCTGCAGCTGGAACTCAGTCTCTCAACCAGTATCTCACCGGAAGCTTGGACATCGACGACGACATGGACGAGGACCTAGAGACCGATCCTGACCTCGACATTGATAGCAGTGGAGAAATAGTTTATGCAATGTAA 1530 0.4268 MDRSVMTAGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKHTEELVAVKYIERGDKIDENVRREIINHRSLRHPNIVRFKEVILTPTHLAIVMEFASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILKVQYSIPDYVHISPECRHLISRIFVADPAQNLPADLMVENNTMNNQFEEPDQPMQSIEEIMQIISEATIPAAGTQSLNQYLTGSLDIDDDMDEDLETDPDLDIDSSGEIVYAM 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03633 349 FunFam Serine/threonine-protein kinase SRK2E 14 98 - -
Pste1g03633 349 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03633 349 PANTHER SERINE/THREONINE KINASE 22 283 - -
Pste1g03633 349 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03633 349 FunFam Serine/threonine-protein kinase SRK2E 99 285 - -
Pste1g03633 349 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Pste1g03633 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Pste1g03633 349 SUPERFAMILY Protein kinase-like (PK-like) 15 292 IPR011009 -
Pste1g03633 349 Gene3D Transferase(Phosphotransferase) domain 1 99 285 - -
Pste1g03633 349 Pfam Protein kinase domain 23 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03633 349 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03633 Pste-Chr1 17342571 17346929 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03633 22 292 CBL-interacting serine-threonine protein kinases AT5G10930 41.667 1.17e-62 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pste1g03633 Pkinase 2.6e-66 CL0016