Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03631 CATTTCACTTCTCTCTCATTCATTCTTTCCCCACTTTTTTTTCTCCAAAAAGAGAATGACACAAAAGGAATAATCTCCTTAGTCCTCAAAACAGAAGAAAAAAGAAAAGAAAATACCCTTTTTGTCATCCTAATAACTTTCACTGCAACATGGCTTCATTTCCTGCAGAACTAAGCTTGGATTTGAGAACCACTTTTCTTACCAGGACCATCAATGATTTTCTCACCAACCTTTCATCCACCCCAAATACTTCACACAACATGTCCTTGCTTGATGACTTTGTCAACAGATTGGAACTCGAATTGACCAAGATCCATGCATTCAAACGCGAACTTCCTCTCTGCATGTTCCTTTTAAATCATGCAATTTCGGCATTGAAGGTGGAATCAGCAAAATGCAGGGCTTACAAGTCTGAGCCAGTGTTGGAGGAGTTCATTCCTCTGAAGAAAGAGTGTGATCAGAGGGAGGAGAGTGAGAAGGAGAAGGAATGGTGGGATAAGAAGAATTGGATGAGTTCTTTTCAGCTTTGGAACAATGATGACAAAGCTGATAATGGTAACAGTGCATATGAATGTCAGAAAAAACAGAACTATAGAGTTGAAAACAAGAATAATGGAGAGGAAAGACAATCAGTGGCCAAGGACATGTCCCATTATAGTAGAAATAGAAATGGAGAGAAGAATAGAGTGAGAGGGTTTGTTATGCCTTTTTCCTCTTACCCTGAATCAAACGAAGATTGTGTTGTCAAAGGACTTTCTCTTCTGACCCCTGGAACTGCAGTGAAAAACACAAGGGAGGGATCTGGCTGCAGAACCACCTCTTGCAGGGTGGTTTCCTCCACTCCTTCACCTCCGCCTCAGCCGCAAAGTGGCCGGAAACAAAGGAGGTGCTGGTCACCGGAATTGCATCACCGCTTTGTTAAGGCTCTAGAGGAGCTTGGAGGCTCCCAAGCAGCTACTCCAAAGCAAATTAGGGAACTCATGAAGGTAAATGGCCTGACCAATGATGAAGTTAAGAGTCATTTACAAAAATACAGACTTCATACTCGGAGAGTTCCAATTGCTACAACTGCAACTTCTAATCGATCTGCTGTAGATCATGGAGGCTTGTGGGTGCACAATGAATCCTTGAAGGGTAGCAGTTCTGGTTCTCCTCAAGGTCCTCTCCAGTTAGCTACACAATCTGGGGAAGCTACATCCCACACTGAAGGTGACATCATAGATGATGATGTAAAATCCAACCTATAACTGGAAAGAGTACATTCAAAAACATGGAAATGGTGATGTATAGATATTTCTCACCATGAATTTTGCAGATAAAAGTAGAGGAGTTTTACAGCTACTCTCGAAGAACACATGATACATTAGCATAGGATGGATCTATGCAAAGAGGCTTTTGAAAATTTGAAGGATCAGTTTTCCTTATAGCCAATGGGTTTTTACACATACTCTGAAGTAAAAATTTGGTTTTGTACATTAAGAAGCTGGAGCTGTTCACTTTTCCAATATCATACTGATCATTCATTTCTTTTTGCCATGAGAACAATGTGTAGTGATGGGAAGTCTGAAGGTATAGAAGGATTTTGAAGTTTCATAATTTCACCGTTGACTTTAATAGCTTTGATTATTTATATTTGAAATATTGCATTGGTTGCAGTGGTGTGAAAATAGGAGCCTCACCAAGCTATCATGTTACTCCTAGTTTTGCTCCATATCTTGTGTATCGTAATAGTGGTGAATGATTGCCAGCTTTAAATTGGAAAACCTTGATTAGTGCTCCATTGTTGTCTTGAGATAAGACAAGACAGGTTATGAAATTTGTCAACAGGGTCAAATGTAAATTTACTATGTGAGCCAGAGTGAGAGATAAAATGCTTCATACCATTTTGTCTACAACGTCCACAAGGCTATCA 1912 0.3996 MASFPAELSLDLRTTFLTRTINDFLTNLSSTPNTSHNMSLLDDFVNRLELELTKIHAFKRELPLCMFLLNHAISALKVESAKCRAYKSEPVLEEFIPLKKECDQREESEKEKEWWDKKNWMSSFQLWNNDDKADNGNSAYECQKKQNYRVENKNNGEERQSVAKDMSHYSRNRNGEKNRVRGFVMPFSSYPESNEDCVVKGLSLLTPGTAVKNTREGSGCRTTSCRVVSSTPSPPPQPQSGRKQRRCWSPELHHRFVKALEELGGSQAATPKQIRELMKVNGLTNDEVKSHLQKYRLHTRRVPIATTATSNRSAVDHGGLWVHNESLKGSSSGSPQGPLQLATQSGEATSHTEGDIIDDDVKSNL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03631 365 SUPERFAMILY Homeodomain-like 241 301 IPR009057 -
Pste1g03631 365 Pfam Myb-like DNA-binding domain 245 296 IPR001005 -
Pste1g03631 365 MobiDBLite consensus disorder prediction 210 247 - -
Pste1g03631 365 NCBIfam myb-like DNA-binding domain, SHAQKYF class 243 298 IPR006447 GO:0003677
Pste1g03631 365 MobiDBLite consensus disorder prediction 325 351 - -
Pste1g03631 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 242 300 IPR017930 -
Pste1g03631 365 MobiDBLite consensus disorder prediction 151 174 - -
Pste1g03631 365 MobiDBLite consensus disorder prediction 210 230 - -
Pste1g03631 365 FunFam Myb family transcription factor 242 300 - -
Pste1g03631 365 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 13 359 IPR044787 GO:0003700|GO:0006355
Pste1g03631 365 Gene3D - 242 300 - -
Pste1g03631 365 MobiDBLite consensus disorder prediction 325 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03631 Pste-Chr1 17298100 17300869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03631 6 325 G2-like Transcription Factor Family AT2G03500 40.401 1.59e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste1g03631 Myb_DNA-binding 2.2e-07 CL0123