Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03609 ATTGTTCTTCTTCCTTCATTCAAGAACAAAAAATGGGTTTCCGCTTAAGTGCTATTCTACGAGCTTCATTCACAGCTGGCCAAGTAGCTTCAAAATATGTAGAAATCCCAAAGGGCTATCTTGCGGTAGAGAAGCAAAAGCGGTTTGTGATTCCTGTATCATACTTGAATCAACCTTCATTCCAAGAATTGTTGAGTCAAGCTGAGGAGGAGTTTGGATATGATCATCCAATGGGTGGAATCACAATTCCTTGCAGTGAACATCAAGATGTCATTGCATTCATGTGGAATCAAATATATATTTGTCTTGTATATAACTCTTGTGTCATTAGTATATTTTTTTGTTGTGTGGAGAAACTGAAAGAATGGTTCCATATAGCAATCTATGTTGGAGATAAATTGATGCAGTTCATGATTCTAGTATCATACTTGAATCAACCTTTATTTAAAAAATTACTAAGTCTAGCAAGAAAAGACTTTGGATATGATCATCGATCCAATGGGTGGTGTCATGACACCATGAAATATTGGGACGATGTTTGCTTCAACTATGACGTTAAGATCACAAATAGCTTCTTTTTGTCTCCCATAAAAACTGCAAGAGGGTCATCTAAGACAATACCGCATGTCATGTCTCTCGTTAGTCCCATGGCTCCTATTCCATTTGTCCACCTTCACAATAATGAAACATTTACGACCAATATAAATTGTTCACATCTTACAACATTCAAAATTCTCAAGACTATTCTTAAACCACTTTCTTCTAGCTCACATAAATACAACAATGGGTTTTCGTTTATCTGGTATCAGGAATTCATTATTTGCAGCAAATCAAGCATCTTCAAAAGTAATGAATGCAACAAAGGATATGTTACTGTCTATGTTGGAGAGAAAATGAAGCGATTTGTAATTCCTCTGTACCTGAACCAAGCTTTGTTCCAGAACTTGTTGAGTCAGGCCGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGTCTCAGAATTCCTTGCAATTCATTCTTTGAAAATTTGAGATTGTTTTTCTTCCTTCAATCAAACACAAAATGGGTTTCCGTTTACTTGTTATTCGACACAGCTTCCCAAGCAGCTTCAAAATCCGTAGAAATCCCAAAAGGCTATCTTGCAGTGTATATTGGAAATGGAAAAAAGCGGTTTGTGATTCCTGTATCATACTTGAATCAACGTTCTTTCCAAGACTTGTTGAGTCAAGCTGAGCTGCAAGCTTTCAGAACCAACAGAAATCATTCACATCATACAACATTCAAAGTTCTCAAGACTTTTCTTAAACCATCTTCTCAAGTCAATACAAAAAAAAGAAGAAACATTACAACAATGGGTTTTCGTTTACCTGTTATCAGAAAGTCATTATTTGCAGCAAATCAAGGATCTTCAAAAACGGTGGAAGCACCAAAGGGATATCTTGCAGTGTATGTTGGAGAGACAACGAAGCGATTTGTGATACCTGTATCATACTTGAACCAACCTTCATTCCAGGACTTGCTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCACTGAAGATTCAAGCAAACAAAAAATGGGTTTCCGTTTACCTGTTATTCGACGAGCATCATTCAAAGGTAGCCAAGCAACTTCAAAATTTGAAGAAGTTCCAAAGGGCTATTTTGTGGTGTATGTTGGAGATAAGCAAAAGCGGTTCGTGATTCCCATATCATACTTGAATCAACCTTCATTCCAAGTATTATTGAGTCAAGCAGAAGAGGAGTTTGGATATGATCATCCTATGGGTGCATTTAGGACCAACAAAAACGATCACATCCTAAACCATTCAAATTTGAAAGATTTTTTTATAAACCTCTCTCCTCAAATCAATACAACAATGGGTTTCCGTTTGCCTGGTATCAGAAAGGCATTATTTGCAGCAAATCAAGCATCTTCAAAAGTGGTGGATGTGCCAAAGGGCTATCTTGCAATATATGTAGGAGATAACATGAAGCGTTTTGTGATCCCTGTGTCATTCTTGAACCAACCTTCATTTCAGGAGTTGTTAAGTCAAGCCGAGGAAGAGTTTGGATATGCTCATCCCATGGGTGGCCTCACAATTCCTTGCAATGAAGATCACTTCCATCATTCATTCCTTAAAAAATTAAGATTGTTCTTCCTTCAAACAAGCAGAAAAATGGGTTTCCATTTACTTGCTATTCGACGAGCATCATTCACAGCTCGCCAAGAAATTTCAAAATTTGTCGAAGTCCCAAAGGGCTATCTTGCAGTGTATGTTGGAGAGAAACAAAAGCGGTTCGTGATTCCCATATCATACTTGAACCAACCTTCATTCCAAGATTTGTTGAATCAAGCTGAGGAAGAGTTTGGCTACAATCATCCGAAGGGTGGCCTCACAATTCCCTGTAGTGAAGAAGGTGATAATTTGGTTCCAAGTTTTAATAAGGAGGAATGTAACCTAATTGGGGTGTTGGCGTGTTGCAAGTTAGATTATGGTTCTAAACAACGACCATATGAACGAAACTTGACAGAATCAAAAAACAAAATTGTACAAATTCAATCATTTCGTTCTCATATAAGTAATCTTCTGGCTCATATAAATCACGTGGTTGTTCGAGAAGCTATATGTTGGAAAATATCTTCACTGCAAGGAATGGTGAGGCCACCTTTAGGATTACTTTTTCTATATAAATATATTCATGGAAGCAAATATTTCAGACAACAAAATCCTTCACACATTCTAAAGCATTCCAAGTTCAAAAACTTGTCTACTCTTCTCATATTTTGTTCCCAAGTTTCAACTCATACAAAGATGGGTTTTCGCTTACCTAGCATCAGAAAGACATCCTCTACTGCAAACCAAGTATCTTCAGATGTGCCAAAGGGCTACCTTGCAATCTATGTTGGAGAGAAAATGAAACGATTTGTTATCCCTGTAACATACTTGAACCAACCTTTATTTCAAGATCTGTTGAATCAAGCTGAGGAAGAATTCGGGTATGACCATCCAATGGGTGGTCTCACAATACCATGCAAGGAGGACGAGTTTCTAATGATTTTCAAGTTCAAAAACTTTGCAGCTTATCACAAGTCTTTTCTCAAATTCTTTTCCCAAGTCTCAACACATATAAAAAGAATGGGTTTTCGCTTACCTGGCATAAAAAAGCGATCCGGTGCTTCAAACCAAGCATCTTCAAATGTTGTGGATGTGCCAAAGGGCTATCTTGCAGTCTATGTTGGAGAGAAAATGAAACGGTTTGTCATCCCGGTATCATACTTGAACCAACCTTCCTTTCAAGATCTTTTGAATCAAGCTGAGCAAGAATTTGGGTATGACCATCCAATGGGTGGTCTCACAATACCATGCAAGGAGGATGAGTTCCTTACCACCACCTCTCACTTGAATTAC 3443 0.3799 MGFRLSAILRASFTAGQVASKYVEIPKGYLAVEKQKRFVIPVSYLNQPSFQELLSQAEEEFGYDHPMGGITIPCSEHQDVIAFMWNQIYICLVYNSCVISIFFCCVEKLKEWFHIAIYVGDKLMQFMILVSYLNQPLFKKLLSLARKDFGYDHRSNGWCHDTMKYWDDVCFNYDVKITNSFFLSPIKTARGSSKTIPHVMSLVSPMAPIPFVHLHNNETFTTNINCSHLTTFKILKTILKPLSSSSHKYNNGFSFIWYQEFIICSKSSIFKSNECNKGYVTVYVGEKMKRFVIPLYLNQALFQNLLSQAEEEFGYDHPMGGLRIPCNSFFENLRLFFFLQSNTKWVSVYLLFDTASQAASKSVEIPKGYLAVYIGNGKKRFVIPVSYLNQRSFQDLLSQAELQAFRTNRNHSHHTTFKVLKTFLKPSSQVNTKKRRNITTMGFRLPVIRKSLFAANQGSSKTVEAPKGYLAVYVGETTKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCTEDSSKQKMGFRLPVIRRASFKGSQATSKFEEVPKGYFVVYVGDKQKRFVIPISYLNQPSFQVLLSQAEEEFGYDHPMGAFRTNKNDHILNHSNLKDFFINLSPQINTTMGFRLPGIRKALFAANQASSKVVDVPKGYLAIYVGDNMKRFVIPVSFLNQPSFQELLSQAEEEFGYAHPMGGLTIPCNEDHFHHSFLKKLRLFFLQTSRKMGFHLLAIRRASFTARQEISKFVEVPKGYLAVYVGEKQKRFVIPISYLNQPSFQDLLNQAEEEFGYNHPKGGLTIPCSEEGDNLVPSFNKEECNLIGVLACCKLDYGSKQRPYERNLTESKNKIVQIQSFRSHISNLLAHINHVVVREAICWKISSLQGMVRPPLGLLFLYKYIHGSKYFRQQNPSHILKHSKFKNLSTLLIFCSQVSTHTKMGFRLPSIRKTSSTANQVSSDVPKGYLAIYVGEKMKRFVIPVTYLNQPLFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLMIFKFKNFAAYHKSFLKFFSQVSTHIKRMGFRLPGIKKRSGASNQASSNVVDVPKGYLAVYVGEKMKRFVIPVSYLNQPSFQDLLNQAEQEFGYDHPMGGLTIPCKEDEFLTTTSHLNY 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03609 1137 Pfam Auxin responsive protein 20 76 IPR003676 GO:0009733
Pste1g03609 1137 Pfam Auxin responsive protein 537 594 IPR003676 GO:0009733
Pste1g03609 1137 Pfam Auxin responsive protein 359 401 IPR003676 GO:0009733
Pste1g03609 1137 Pfam Auxin responsive protein 948 1019 IPR003676 GO:0009733
Pste1g03609 1137 Pfam Auxin responsive protein 442 520 IPR003676 GO:0009733
Pste1g03609 1137 Pfam Auxin responsive protein 642 710 IPR003676 GO:0009733
Pste1g03609 1137 Pfam Auxin responsive protein 740 805 IPR003676 GO:0009733
Pste1g03609 1137 Pfam Auxin responsive protein 268 330 IPR003676 GO:0009733
Pste1g03609 1137 Pfam Auxin responsive protein 114 154 IPR003676 GO:0009733
Pste1g03609 1137 Pfam Auxin responsive protein 1056 1131 IPR003676 GO:0009733
Pste1g03609 1137 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 22 77 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03609 Pste-Chr1 17146513 17190825 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03609 750 806 Calmodulin-binding Proteins AT3G43120 56.140 3.94e-15 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03609 1 17146513 17190825 Pste1g03609 1 17146513 17190825 ECH