Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03604 TATGCCTTCCCATGTTTGCTCTCTTTCTTATTAACTCCCTCTTCTGTGTTCCAAACACAGCTGCCTCTGTACTAGGAAACCAGACCGATGATTTGGTATTGCTCAAATTCAAGGAATCAATTTCAAATGATCCTTATAAAATCTTGTCTTATTGGAATAGTTCCACCCATTATTGCACGTGGCATGGAGTTACATGTAATCCCATTCATAAAGTTACAAAGTTGAACCTAGAAGGAAACAACTTGCATGGATTCATATCTCCTCATATAGGTAATCTCTCTTTCCTAAAAAGTCTTAACCTCAGAAACAATAGTTTCTTTGGAAAAATTCCCCAAGAATTGGGTAGGCTGTTACAATTACAAAACTTATCTCTTACCAATAACTCATTAGAAGGGGAAGTTCCTACAAACTTGACAAGATGCTCTAATCTCAAAGAGTTACATTTATTTGGTAACAATTTGATTGGTAAAATACCAATTGAAATTGGCTCTCTTCAAAAGCTTCAAGAAATGAGCATTGGAGTAAACAATTTTTCTGGAGCAATTCCATCTTCTATTGGGAATCTTTCATCTCTTATTTCTCTCTCCATGGGTGTTAATAGCTTAGAAGGAAATATTCCGCAAGAAATTTGTCACCTAAAAAATTTGACAATGATATCATTGCATGTCAACAAGATGAGAGGTACATTTCCTTCTTGCTTTTACAATATGTCATCTCTTACCATAATCTCAGTTGCAAACAATCAATTTAATGACTCTTTTCCACCAAACATGTTCCACACCCTCCCTAATCTGCGAGAATTCCTAGTTGGAGGAAATGATATCTCAGGTCCAATCCCAACATCCATTATAAATGCATCTGTCCTGCAAACATTTGATGTTGGTAAAAACCATTTGATGGGTCAAATCCCAAGTCTAGGAAAGATGCAACACCTTTGGTTCCTAAGTTTGTATAGCAACAACTTAGGTGACAATTCAACAATGGACTTGGATTTTTTAAAATCCTTGGCTAATTGTAGCAAGTTGCAAGTGGTTTCTATTTCCTATAACAAATTTGGAGGTAGTTTATCAAATTCTATTGGAAACTTTTCCACCCAACTCAGTCAATTATATCTTGGGGGTAATCAAATATCAGGAAAAATTCCTACAGAATTAGGAAATCTAATTAACTTAACCATCTTGACCATGGAAATTAACCATTTTGAAGGGATTATTCCAACCACTTTTGGGAAGTTTCAGAAGTTACAAAAGTTGGAGTTGAGTAGAAACAAACTTTCAGGACCTATTCCAGATTTTATAGGCAACCTTACTCAATTATACTATTTAGGCATAGCAGAAAATATGTTAGAAGGAAAGATTCCTCCAAGTATAGGAAGTTGTCAAAAGTTGCAATATCTTGACCTTTGGAGAAACAATCTTAGAGGAAGCATACCTTTAGAGGTTTTTAGTCTTTTCACTTTAACAAACAAATTGGACTTATCAGAAAATTCATTGAGTGGCAATTTACCCAATGAAATTGGTCGATTAAAAAATATTGGAACAATAGATGTGTCTGAAAATCATTTATTTGGTGACATTCCTGAAACTATTGGAGATTGCACAAGTTTGGAGTACCTCTATCTACAACAAAATTCCTTTCATGGAAACATACCATCCTCTTTGGTTTCACTCAAAGGTCTTCGAGTATTAGACATGTCACAAAATCATCTAGTTGGATCAATTCCTAAGGATCTACAAAGTATTTCTTTCTTAGAGTACTTCAATGTTTCTTTTAACATGTTAGAAGGACAAATACCAATGGAAGGTGTCTTTCGAAATGTAAGTGAGATAGATTTAATTGGGAACAACAAGCTTTGTGGGGGTGTTTCAGAGTTGCATTTACCACCATGCCTTATCAAAGGTAACGAACCTATAAAACACTTGAATTTCATGTCCATTGCAATGATGATAGTTAGTGTGGTAGCTTTTCTTCTCATACTACCATTTATCTACTGGATGAGGATAAGAAGTGAGAAGAAAACATCATCTGATTTGCCCATAATTAATCAATTGAGTAAAGTTTCCTACCAAAACCTACACCATGGAACTAATGGGTTTTCAGCTCAAAACTTGGTAGGATCAGGAAATTTTGGTTCTGTATACAAAGGGACTATTGAGTTAGATGGAGACAATGTTGTTGCCATAAAGGTCCTAAACCTTAAAAAGGAAGGGGCTCATAAGAGTTTCATTGCAGAATGTAATGCCTTGAAAGATATTAGGCATCGAAACTTGGTCAAGGTTTTAACATGTTGTTCTAGTATAGATCACAATGGCCAAGAATTCAAAGCTCTAGTTTTTGAGTACATGACAAATGGAAGCTTAGAAAGATGGTTGCATCCAGAACTAGAAATTGCAAAGCAGCCTACTAGATCATTGAACCTTGATGAAAGATTAAATATTATCATTAATGTGGCTTCTGCATTTCATTATCTTCACTATGAATGTGAGCAAGCTATCATTCATTGTGATTTGAAGCCAAGCAATGTTCTTCTTGATGATTTGTTGGTTGCTCATGTTAGTGACTTTGGTTTAGCAAGAACGTTATCAACTCTTGCAATTTCTCCAAAGCAAACTAGCACCATTGAAATAAAGGAATATGGGATGGGAGCAGATGTGTCTATAAAAGGTGACGTCTATAGCTTTGGAGTTCTTGTTTTGGAAATGTTAACTGGAAGAAGACCAACAGATGAAATGTTTGAAGATGGTCTTAATCTCCATAACTATGTCAAAATTTCAATTCCAAATAGCCTTTCCCAGATTGTGGACTCAACTATTCTTCCTAATAAATTAAAGCATGCTAATAATTACTCAGATTTGGCCCTTATGGATCCCATAGTAGAGAAATGTTTACTTTCACTTTTTAGGATTGCACTTGCTTGTTCAATGGAGTTGCCTAAAGAAAGAATAAGCATGATTGATGTTACTAGGGATCTCAACCTGATCAAACGTTCATTTTCTTTA 2999 0.3508 MFALFLINSLFCVPNTAASVLGNQTDDLVLLKFKESISNDPYKILSYWNSSTHYCTWHGVTCNPIHKVTKLNLEGNNLHGFISPHIGNLSFLKSLNLRNNSFFGKIPQELGRLLQLQNLSLTNNSLEGEVPTNLTRCSNLKELHLFGNNLIGKIPIEIGSLQKLQEMSIGVNNFSGAIPSSIGNLSSLISLSMGVNSLEGNIPQEICHLKNLTMISLHVNKMRGTFPSCFYNMSSLTIISVANNQFNDSFPPNMFHTLPNLREFLVGGNDISGPIPTSIINASVLQTFDVGKNHLMGQIPSLGKMQHLWFLSLYSNNLGDNSTMDLDFLKSLANCSKLQVVSISYNKFGGSLSNSIGNFSTQLSQLYLGGNQISGKIPTELGNLINLTILTMEINHFEGIIPTTFGKFQKLQKLELSRNKLSGPIPDFIGNLTQLYYLGIAENMLEGKIPPSIGSCQKLQYLDLWRNNLRGSIPLEVFSLFTLTNKLDLSENSLSGNLPNEIGRLKNIGTIDVSENHLFGDIPETIGDCTSLEYLYLQQNSFHGNIPSSLVSLKGLRVLDMSQNHLVGSIPKDLQSISFLEYFNVSFNMLEGQIPMEGVFRNVSEIDLIGNNKLCGGVSELHLPPCLIKGNEPIKHLNFMSIAMMIVSVVAFLLILPFIYWMRIRSEKKTSSDLPIINQLSKVSYQNLHHGTNGFSAQNLVGSGNFGSVYKGTIELDGDNVVAIKVLNLKKEGAHKSFIAECNALKDIRHRNLVKVLTCCSSIDHNGQEFKALVFEYMTNGSLERWLHPELEIAKQPTRSLNLDERLNIIINVASAFHYLHYECEQAIIHCDLKPSNVLLDDLLVAHVSDFGLARTLSTLAISPKQTSTIEIKEYGMGADVSIKGDVYSFGVLVLEMLTGRRPTDEMFEDGLNLHNYVKISIPNSLSQIVDSTILPNKLKHANNYSDLALMDPIVEKCLLSLFRIALACSMELPKERISMIDVTRDLNLIKRSFSL 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03604 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
Pste1g03604 996 Gene3D Ribonuclease Inhibitor 324 632 IPR032675 -
Pste1g03604 996 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Pste1g03604 996 SUPERFAMILY L domain-like 25 318 - -
Pste1g03604 996 SMART LRR_typ_2 456 480 IPR003591 -
Pste1g03604 996 SMART LRR_typ_2 384 407 IPR003591 -
Pste1g03604 996 SMART LRR_typ_2 553 576 IPR003591 -
Pste1g03604 996 SMART LRR_typ_2 185 209 IPR003591 -
Pste1g03604 996 SMART LRR_typ_2 89 113 IPR003591 -
Pste1g03604 996 SMART LRR_typ_2 408 432 IPR003591 -
Pste1g03604 996 SMART LRR_typ_2 233 257 IPR003591 -
Pste1g03604 996 Gene3D Phosphorylase Kinase; domain 1 676 777 - -
Pste1g03604 996 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 62 324 - -
Pste1g03604 996 FunFam LRR receptor-like serine/threonine-protein kinase EFR 325 632 - -
Pste1g03604 996 SMART serkin_6 695 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03604 996 Pfam Leucine rich repeat 211 271 IPR001611 GO:0005515
Pste1g03604 996 Pfam Leucine rich repeat 386 445 IPR001611 GO:0005515
Pste1g03604 996 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 778 996 - -
Pste1g03604 996 ProSitePatterns Protein kinases ATP-binding region signature. 701 725 IPR017441 GO:0005524
Pste1g03604 996 Gene3D Transferase(Phosphotransferase) domain 1 778 995 - -
Pste1g03604 996 Pfam Protein tyrosine and serine/threonine kinase 698 908 IPR001245 GO:0004672|GO:0006468
Pste1g03604 996 Gene3D Ribonuclease Inhibitor 147 252 IPR032675 -
Pste1g03604 996 Gene3D Ribonuclease Inhibitor 253 323 IPR032675 -
Pste1g03604 996 PANTHER LEUCINE RICH REPEAT KINASE 2 330 992 - -
Pste1g03604 996 SUPERFAMILY Protein kinase-like (PK-like) 669 989 IPR011009 -
Pste1g03604 996 Pfam Leucine Rich Repeat 92 111 IPR001611 GO:0005515
Pste1g03604 996 SUPERFAMILY L domain-like 334 616 - -
Pste1g03604 996 FunFam LRR receptor-like serine/threonine-protein kinase EFR 666 777 - -
Pste1g03604 996 Gene3D Ribonuclease Inhibitor 26 137 IPR032675 -
Pste1g03604 996 ProSiteProfiles Protein kinase domain profile. 695 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03604 Pste-Chr1 17126791 17129926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03604 23 994 Receptor kinase-like Gene Family AT3G47570 45.025 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pste1g03604 PK_Tyr_Ser-Thr 6.6e-36 CL0016