Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03575 GAATGCTTCCACCAATTCTTTTTCTCACTCTCGCATTCCATATTCCAGATCCAATTTACTGTGATCTGGTTTCCATCAATTGTTCATTTCTGCCAAAGAAAATGAAGAATTCGGTATTTGTATTCCCATAGCACACCCACTTGATGTAGATATCAGGTTTCTATTTCATAAACTGCAGGATTTTTCCCCTTCATTCTTTATTTTTTACTTGGAGTTACCTACCTTGTGGCTTATACGTTTTCTGGTGTAGAGCAAAGAAAGATCCAGTGTGCAATCCAACAACATCTGAAGTTGTTTTTGAAAATTGAACTATGTTGTTCTTCTTTGGCTCTTGTTTCCTACTCTTTGCGTTGTTCATTGTCTTTCAGTTATTTCGAAAACTGACAGGTGGTGTAGCAGAGGAAAAACCATTGTCAAATAACAACTCATCTCCTCAAACAAAGTACGATGTTTTTGTTAGCTTTAGCGGCAAAAACATTCGCCGAGGATTTCTTAGCCATTTGATTGACAGTTTTGAAAGGAAGAAGATAAATGCCTTTGTAGATGATAGACTTGAGAAGGGAGAAGAAATATGGCCATCCCTTGTTGAAGCAATTGAAGGATCATTAGTTTCAGTGGTCATATTCTCACCAGACTATTCTTCTTCTCGTTGGTGTTTAGCTGAACTAGTTACAATACTTGAATGCAAAGAGAAATATGGACGAAGAGTCATCCCTGTTTTCTACAGGGTAGAACCCATGAATGTACGACATCAACTGGGGAGTTATGAAAATGCATTTGCAAAGCATTCTAGTAGACATAAGACCGAGGTCGTTGATAACTGGAGACATGCCTTGAAAAAGGCTGCTGATTTAGCCGGAATTGTATCATCTCAATTTGGGAAGGATGCTGAGTTGGTTACAGAAATTGTCAATTTTGTGCTAGAAAAGTTGCCCAAAATTCCAGTTAATTCAAAAAAACTTGTTGGAATTGATAAAAAAATTTCAGCGATAGTATCATGGATCAGAGAAGAGCCAAAAGATACACATCTTATTGGAATTTGGGGTATGGGTGGTGTTGGCAAAACAACCCTAGCAGAAGAAGTATTTAATAAACTACAATCTGAAGATCAATACGACGGTTGTTGTTTTTTAGCTAATGAAAGAGAGGAATCAGATAAACGGGGAATAATTTCTTTGAAGCAACAAATTTTTTCTAAACTATTAGGAAATGATGTGAAAATTTACACAGAGAATTCGTTGCCCGAAGATGTTGTCAGAAGAATTGGTTTTATGAAAGTTATTATTGTTCTTGATGATGTGAATGATTTAAGTCACTTAGAAAAACTGTTGGGAGCTCTTGATAGGTTTGGATTGGGTAGTAAAATAATTGTAACAACGAGAGATGAACAAGTGCTTAAGGGTAACAATGTCCATAAGACATACCATCTTACGGAACTCAATTCTAAGGAAGCACTTGACCTTTTCACTTTGAATGTCTTTAATCAAAATGATCATGAGTACAATGAGCTATCAGAAAAGGTTGTCAAATACGCCCATGGCATTCCATTAGTTGTTAAAGTTTTGGCTGGTCTTCTTCGTGGAAAAAATAAGGAAGAATGGGAAAGTATGCTACACAAGCTTAAAAGATTGCCTCCTACAGAAGTTTTTCAAGTATTGAAACTAAGTTATGATGGACTAGATCGCAAAGAGAAACACATTTTTTTAGATCTGGCATGTTTCTTTCTTAGAATTCATACTATGGTAAATGTGAGCGATCTAAAATCTTTATTGAAAGATGATGAAAGTGATGACTCTGTGGCTTTTATGTTGGTAAGGCTGAAAGATAAAGCTCTTATAACAATCTCTAAGGATGATATTGTGTCTATGCATCATAGTTTACAAGAAATGGCTTGGGAGATTGTTCGTCAAGAGTCTCCTGAAGATCTTGGAAGCCGCAGTCGATTGTGGGATCCTGATGACATTTATAAAGCATTGAAAAAAGACAAGGTTAATGAAGTCATTAGGAGCTTGCAAATTAACTTGACAACTATCAAAGGGCAAAAGTTAATGCCTCACATATTTGCTAAGATGAGCAGACTAAAATTTTTAGAAATTTCTGGCGAAGATAAAGATGATTGCTACGATAAAATTATTCTTGCTGCTGAATGGTTTCAATTTTTAGCAAATGAATTAAGATTTCTTTCTTGGGATCATTATCCTTTAAAATCCTTGCCGGAAAATTTTTCTGCAGAAGAACTTGTAATATTGAAAATGGAACACAGCTTCGTGGAAAAACTTTGGGATGGAGTGAAGGATTTGGTGAATTTGAAAGAAGTTGACCTCAGTTATTCCGATATAAAGGAATTGCCAGATTTATCAAAAGCTACAAATCTTGAAAAGTTGGTTCTCGAGGCTTGTTCTAAGTTGATTAGTGTGCATCCATCTATTTTTTCTTTACGCAAACTTGAGAAATTGGATCTTTTTTATTGCAAATCCGTTACCATACTCACCAGCAAGTCCCATTTATGCAGCCTCAGTTATCTGAATCTTACTTCATGCTTTAAATTGACGGAATTCTCATTGATATCAGAGAACATGAAAGAACTGAGATTATCAAGTACGAAAGTGAAAACACTTCCATCATCATTTGGACATCAAAGCAAGCTTGAATTGTTAGATTTAAACAGGAACAGGAAACTTGAAACAATAATAGAGCTTCCCCCATTCATTAAAGTTGTAGATGTCACTGGGTGTACATCACTTAAAAGTCTACCAGAGCTTCCCCTTTCACTGCAAACTCTAAATGTCCATGGCTGTCTATCACTTGAGAGTCTACCAGTGCTTCCCCTTTCACTAAAAGTTCTAGATATCAGTTTATGTGAATCACTTGAAGCTCTACCAGACCTTCCCTTGTCACTTGAAACTCTAGATGCCACAAGCTGCACATCCTTGAGGTCTGTATTGTTTCCTTCAACATTCAAGGAAAACAGGAAACGGGTTTTGTTCGGGAATTGCTTGAACTTGGATGAAGATTCTCTAGTCACTATTGGGTTGAATGCGCAAATTAGCGTGATGAATTCTGCAAACCGGTACCTGTCTGCTTCAAATCACGATCATGTTCAAAATTACAGTGATTCTGATCGTAATCATCGCTCTTATGAAGCTGCTCTTTACGTGTATCCAGGAGATAGTGTTCCAAAGTGGTTAGAGTATAAGACAAGAGAGGATGAGGATTATGTAATTATTGATCTCTCTTCTGCTCCACCTTCTCCATTCCAAGCCTTCATTTTCTGCTTTGTAATTGGGCACTACAATCCCGGCGGCTTTATTTTTAGTGTACAAGTTAAGATCACTGTAAGCGATTGTGAAGGTGAGGGTGAAGGTACAGAGGACAATATCAGTGTGCTCATGGATTGTTACATTACTGGTGACCTAAAAGGATCTGATTCATTTGACCACGTGTGTGTGATGTGCGACCAAAGATGTTGTGACTTCCTAAATAGCAAAGCTAAACATCAAACAAGGCTTAAAATCCATGTTACAATATTGCAAGCTAGAGGCATTTTAGAAGAGTTCCCAAACCCAGTATCCTTGGAGATGTCACCGAGGAATTTGAGAGGATTTGGGGTCAGTCCTATAGCCACTTCAACCTATAACTCTCTCATTCGCCAAATGGAAATGTGTGACTCAAACTCAATGCATCACTTTTCTTAAACAAACCAAATCCGGTTGTGCAGAATAATCCTAGATGAAAATGTCCTTTTTCAGGTAATCAAAGGATATAATGCATAGGAGCTCAAGCATGTGAAGGTTGCGTAATAATAAGTCCTGGTTCTCAGAGTACAGAGGTCTTCCATAGCATCAATCTGGTGAACAATGAATTCAGAACATGGCTTTATGGCTGTAGAGACCATTGCCAAGTTCTTGCAGGTACTAGTACATAGAAAAATAATGGGAAATGAGCAGTAGTCTTAGGGTGGGAAGAAATAAGTCTACGTGATGGCTTATCTTGAATCTTTTGGATGTCTGTGTCTGGGACTGGTGCATATCTTTGTATAGTTTAGTAATAGCTGGACATGGACTTCTTTATGACGAGTCTTGGATGAAGAACGGTGTCATTTTAAGAAGAATCCCAAGGCTTTACCTTTCGCCCATTTTTAATTTAGGAGATTGGATGAGTGAAAACTGCTGAGTAAGTTTTTGGTTTTAATTTAAGAATTATTCATCTAGCATCCCAAGTTTTAGGTTTTATGAGATGGCCATGAGTGTCAACTATATCATCTTATTAATGAATCTTGTTATCAACTGTACTGCTCAATGAAACAAGA 4309 0.3711 MLFFFGSCFLLFALFIVFQLFRKLTGGVAEEKPLSNNNSSPQTKYDVFVSFSGKNIRRGFLSHLIDSFERKKINAFVDDRLEKGEEIWPSLVEAIEGSLVSVVIFSPDYSSSRWCLAELVTILECKEKYGRRVIPVFYRVEPMNVRHQLGSYENAFAKHSSRHKTEVVDNWRHALKKAADLAGIVSSQFGKDAELVTEIVNFVLEKLPKIPVNSKKLVGIDKKISAIVSWIREEPKDTHLIGIWGMGGVGKTTLAEEVFNKLQSEDQYDGCCFLANEREESDKRGIISLKQQIFSKLLGNDVKIYTENSLPEDVVRRIGFMKVIIVLDDVNDLSHLEKLLGALDRFGLGSKIIVTTRDEQVLKGNNVHKTYHLTELNSKEALDLFTLNVFNQNDHEYNELSEKVVKYAHGIPLVVKVLAGLLRGKNKEEWESMLHKLKRLPPTEVFQVLKLSYDGLDRKEKHIFLDLACFFLRIHTMVNVSDLKSLLKDDESDDSVAFMLVRLKDKALITISKDDIVSMHHSLQEMAWEIVRQESPEDLGSRSRLWDPDDIYKALKKDKVNEVIRSLQINLTTIKGQKLMPHIFAKMSRLKFLEISGEDKDDCYDKIILAAEWFQFLANELRFLSWDHYPLKSLPENFSAEELVILKMEHSFVEKLWDGVKDLVNLKEVDLSYSDIKELPDLSKATNLEKLVLEACSKLISVHPSIFSLRKLEKLDLFYCKSVTILTSKSHLCSLSYLNLTSCFKLTEFSLISENMKELRLSSTKVKTLPSSFGHQSKLELLDLNRNRKLETIIELPPFIKVVDVTGCTSLKSLPELPLSLQTLNVHGCLSLESLPVLPLSLKVLDISLCESLEALPDLPLSLETLDATSCTSLRSVLFPSTFKENRKRVLFGNCLNLDEDSLVTIGLNAQISVMNSANRYLSASNHDHVQNYSDSDRNHRSYEAALYVYPGDSVPKWLEYKTREDEDYVIIDLSSAPPSPFQAFIFCFVIGHYNPGGFIFSVQVKITVSDCEGEGEGTEDNISVLMDCYITGDLKGSDSFDHVCVMCDQRCCDFLNSKAKHQTRLKIHVTILQARGILEEFPNPVSLEMSPRNLRGFGVSPIATSTYNSLIRQMEMCDSNSMHHFS 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03575 1127 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 45 795 IPR044974 GO:0006952
Pste1g03575 1127 SUPERFAMILY L domain-like 534 897 - -
Pste1g03575 1127 PRINTS Disease resistance protein signature 707 723 - -
Pste1g03575 1127 PRINTS Disease resistance protein signature 317 331 - -
Pste1g03575 1127 PRINTS Disease resistance protein signature 240 255 - -
Pste1g03575 1127 PRINTS Disease resistance protein signature 408 422 - -
Pste1g03575 1127 Gene3D - 375 457 IPR042197 -
Pste1g03575 1127 Gene3D Ribonuclease Inhibitor 562 727 IPR032675 -
Pste1g03575 1127 Gene3D Ribonuclease Inhibitor 728 878 IPR032675 -
Pste1g03575 1127 Gene3D - 208 370 IPR027417 -
Pste1g03575 1127 ProSiteProfiles TIR domain profile. 43 207 IPR000157 GO:0007165
Pste1g03575 1127 SUPERFAMILY "Winged helix" DNA-binding domain 444 556 IPR036390 -
Pste1g03575 1127 Gene3D - 42 207 IPR035897 -
Pste1g03575 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 467 IPR027417 -
Pste1g03575 1127 ProSiteProfiles Leucine-rich repeat profile. 665 686 IPR001611 GO:0005515
Pste1g03575 1127 Pfam Leucine Rich Repeat 643 661 IPR011713 -
Pste1g03575 1127 Pfam NB-ARC domain 222 439 IPR002182 GO:0043531
Pste1g03575 1127 SMART till_3 44 181 IPR000157 GO:0007165
Pste1g03575 1127 Pfam TIR domain 44 213 IPR000157 GO:0007165
Pste1g03575 1127 SUPERFAMILY Toll/Interleukin receptor TIR domain 35 183 IPR035897 -
Pste1g03575 1127 FunFam Disease resistance protein (TIR-NBS-LRR class) 41 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03575 Pste-Chr1 16965082 16972404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03575 21 868 WRKY Transcription Factor Family AT4G12020 31.707 8.36e-96 334