Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03573 ATGATCAGTAATTGCATCTCTGAGCATTTTGCAGTTTTGTGGTTATTTCTTCTGGGTTTGGATAAGTATGGCAAAGGTGACTGGCGAAGCATATCAAGAAACTTTGTGGTGACAAGAACACCTACACAAGTAGCAAGCCATGCCCAAAAATACTTCATTCGTTTGAACTCTATAAACAAAGATAGAAGGCGTTCCAGCATACATGATATCACCAGTGTTAACAATGGAGACATTTCAGCGCCTCAAGGACCCATAACCGGTCAAACAAATGGTTCTTCCGGAAATGCTATTGCCAAAGCATCCAAAGCTGCTACCCCGGCCACGACCGGGGTTCCAGGTGTTGGAATATATGCGGCTCCAACCATTGGACAACCTATAGGAGGACCCTTAGTATCAGCTGTTGGCACCCCAGTGAATATTCCTACAACTGCACACATGGCATATGGTGTCCGAGCCCCCGTTCCTGGTGCAGTTGTACCTGGTGCACCGGTAACCATGGGCCCCGTGACGTACCCTATGCAGCATACATCTGCTCCTCACAGGTGAAGTGCTGTTTAGGGGCTTAATGTACAAAAGAAACAAGAGACTAGTGATGGGTTCTGCACTCAATGTAATTCTTTCTTAGACAATTGCTTTTTGCGTATTATATGCAACAGTGAGTTGTATGCATAATCAGTCATTTCTAATAATCCATATGAGGAAGCAATTGCATGTATCTGTATAGGCTGCCATGGAATGTTTGACAGCCTTAACATAGGACAGCATAAAAGTACGGTTGTTTTGTAGACATTTGAATTGGCCATTGTTAAACCGTGCTACAGAGGAATGTTCTGTGGATTTCAAGTGTAAATTATTGCATTCTCTTGGTTTCTGCAGGAAATAAACTCTTCA 891 0.4332 MISNCISEHFAVLWLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSINKDRRRSSIHDITSVNNGDISAPQGPITGQTNGSSGNAIAKASKAATPATTGVPGVGIYAAPTIGQPIGGPLVSAVGTPVNIPTTAHMAYGVRAPVPGAVVPGAPVTMGPVTYPMQHTSAPHR 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03573 181 Pfam Myb-like DNA-binding domain 16 52 IPR001005 -
Pste1g03573 181 SUPERFAMILY Homeodomain-like 15 57 IPR009057 -
Pste1g03573 181 CDD SANT 15 52 IPR001005 -
Pste1g03573 181 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 56 IPR017930 -
Pste1g03573 181 PANTHER TRANSCRIPTION FACTOR KUA1 15 176 - -
Pste1g03573 181 Gene3D - 13 59 - -
Pste1g03573 181 FunFam transcription factor MYB1R1 8 57 - -
Pste1g03573 181 NCBIfam myb-like DNA-binding domain, SHAQKYF class 15 54 IPR006447 GO:0003677
Pste1g03573 181 MobiDBLite consensus disorder prediction 69 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03573 Pste-Chr1 16928107 16929090 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste1g03573 Myb_DNA-binding 8.3e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03573 1 16928107 16929090 Pste1g03573 1 16928107 16929090 ECH