LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste1g03571	ATGAGGACCAGCGTAGGAGATATTGTTCAAGTGGAAGGAGGGCACATTATTAGGTCCACAGGTAGAAAAGATCGCCACAGCAAAGTCTACACTGCCAAAGGGCCACGCGATCGCCGTGTTAGACTCTCAGCACACACAGCCATTGAGTTCTATGATGTTCAAGACAGACTTGGCTATGACAGACCAAGCAAGGCTGTGGACTGGCTCATCAAGAAGGCAAAGCCCTCCATTGACAAGCTCGCTGAGCTTCCTCCATGGCATCCACCTATTCATGAGGAAGAGCAGAATGACGCTGCAGGCTCAAGTGGAACCATGGCCACTGCACAACAACAACAATCAGAATCATCTAGGCAACTAGGGGCCTTCATTTCAACCCATGTGGACACTGACCCCATGAATTTCCAAACCAACAACTCCTCAGAAGATCTTGGCCTATCTCTCCATAGTTTCCAAGACCATCCTGGCCTCATTCATTGGCAATCACAACAGGCAGGTGTAAATCAACCACCTACGTCAAATGAACACCAAATTCAAACCTTTTTTGCTGGCTCAACCCCAGTTGGGTTTGGGAACCAATATCAAAGAACCCTGACTTGGAACAATGAAGCAACAACTGGGGATCATATGAGCAGATTGGGGTTCATTCTCAATTCACAGCCATTTATAGGCCAAGTTTCTGCTTCATCTTATGCTCAAAGTGAGACTCTACAGTCCAGTTTTTCATTTCCAGTGACTTCCTCTGAGCATCACAGGCCTCAGCCAGTGAACCAACCTTCCATCTTTGGCAGCAGGTTTGTGTCTGATGGATTAGCTGGGTTTTGCATTCCAGATAGAATTCAATGTGTGGAAGAGAACCATGGAGTTGCTTCCAATAGGCCATCTTCTTCTCCTAGTTCCATCCACTGA	906	0.4702	MRTSVGDIVQVEGGHIIRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKPSIDKLAELPPWHPPIHEEEQNDAAGSSGTMATAQQQQSESSRQLGAFISTHVDTDPMNFQTNNSSEDLGLSLHSFQDHPGLIHWQSQQAGVNQPPTSNEHQIQTFFAGSTPVGFGNQYQRTLTWNNEATTGDHMSRLGFILNSQPFIGQVSASSYAQSETLQSSFSFPVTSSEHHRPQPVNQPSIFGSRFVSDGLAGFCIPDRIQCVEENHGVASNRPSSSPSSIH	301

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste1g03571	301	ProSiteProfiles	TCP domain profile.	22	80	IPR017887	-
	Pste1g03571	301	PANTHER	TRANSCRIPTION FACTOR TCP4-RELATED	18	253	IPR005333	GO:0003700
	Pste1g03571	301	MobiDBLite	consensus disorder prediction	83	117	-	-
	Pste1g03571	301	MobiDBLite	consensus disorder prediction	97	117	-	-
	Pste1g03571	301	Pfam	TCP family transcription factor	21	137	IPR017887	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste1g03571	Pste-Chr1	16914665	16915570	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste1g03571	5	88	TCP Transcription Factor Family	AT3G15030	86.905	2.67e-47	162

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	TCP	Pste1g03571		TCP	8.6e-33	No_clan