Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03562 CTCCTTCTTCTTCTTCATCTTTTCATTTTGTTGTGAGAGTGTGTTGATTGGTGTGACTAAAAATGGCTCAATTGCCACCAAAAATTCCAAACATGACACCCAATTGGCCGGACTTTTCTTCTCCTCACCAAAAGATGCCTCCCATAAAAGTCATGTCACCAAACATGTCAAACCAAAACCCTTCATGGGTGGATGAGTTTCTTGACTTCTCCGCCGCCCGGCGAGGCGCTCACCGGCGGACGGTGAGCGACTCCACCACCTTCTTGGAGGCACCAATACTTGACCATCATTGTAAAGGTCGCAGTGGTGGTAGCAGCAGCAACAACGAGTTCGAGAGGTTTGATGATGAACAATTTATGTCCATGTTTAGTGATGAGGCTTCAGGGAATACTAACAATAATAACATCAACAACACCATGATGCCACACACGTTGTCCTCCTCCAACCCTTCTACACCTTCTGATCACAACAGCATCAATGATGAGAAGGAGATAATGAACAAGGAAAAAGTGGAAGAGGAGGAGAAGAAGCAAGTGAAGAATGAGTCTTATGAGGATGAAAGCCAATGCAAGCAAGAAATCACACAACTTCCCAACAATGATGATAGTAACAATAATAGCAATGCAAATGCGACAACTTGTTCCAGTGATAAAATCACAGACCCCAAGAGGGTCAAAAGAATCTTGGCAAATAGACAATCGGCACAAAGATCAAGAGTGAGGAAGCTGCAATACATATCTGAGCTTGAGAGAAGTGTGACTTCATTACAGGCCGAAGTTTCAGTATTGTCTCCAAGGGTTGCATTTTTGGACCATCAACGTTTGCTTCTAAATGTTGATAACAGTGCTTTGAAGCAAAGAATCGCCGCGCTGGCCCAAGACAAGATTTTCAAAGATGCACATCAAGAAGCACTGAAGAGAGAGATAGAGAGGCTAAGGCAAGTGTATCACCAACAAAACATAAAGAAGATGGACAATGCTGCAGGATCACCATCTCAATCCCCATCACCATCTTCAAAACCACGATGTGAAACTCACATTGAAAAGGAACAGCTTATCAATGTTTGAATTTGAACCCTCCCTTGAAGACTCACCCTTCATAGACTATGATCAAACCTAGTATGAGCTAGTCTAGATGATCTGTGATTCTTTTCAATTTTACTAAAGAAATTGCAGAATTTTGGTTATGGGAGAAATGGAGGAATGAAAATTAGACAAAACTTAAATGCAATTATAGGTGTTTTAAGTGTTGTTCTTTAATCAGAATTGAATTTCATGTGATCAATAAAAACATTAGCAGTTCTGGTAAAAGAATATCAGAAAATTAAAATACTTATGAAAGTGTATAGAAGTTTTGTAGAAAAGGAAAATTGTTGTGTGACAGTTTGCAGTTGTAATGTAATGAATGGAATGACGTACTGTTGGGTAGAGGGAGGGAGAGAATTTATATTAGGCAATTGATGATGAAGGAAATGTTGTGAAGTGAGAAGGGTCACATAATGGGGTGGTGAGGCCACATTGGTGGTAGGCTTTTGCTATCAAACTGAGGCAGTCACGTGATGTGTTTACTTTAAAAGAAGGGGACCACTCAAGTTGCATGATTGGAATGCAGGGAAACACATGTGCACCAGTGACATCAAAGAGAGGGTGGAAGAAAAAAACAGTTGTGTCTGCTTTAACTAGATGGAGAGGGAGGTACCTGTCGGAGATTCTTTCAGTTATTTTTTTAATTATTTCTTGTCTTCATTCTTTCTTTTTTCTTTTTTTTGTTGGGGGGTTTTTGTTTTTCAATTCAAGTTGGAAAACAAAGACTAGTGGGAGTGTGCACTGTGTTGGGATCAATGAAAGGAATTGGTGTGTAATTATCAGTCAAAGTATTGGCTCCTCAGTGTTTTCTTGTACTTTATATATATGTTACTGCTTTTAAGGGATGTAAATTATCTTTATTTGACTGTTAATTTGAGAGGGAAGAAAAAT 1976 0.3947 MAQLPPKIPNMTPNWPDFSSPHQKMPPIKVMSPNMSNQNPSWVDEFLDFSAARRGAHRRTVSDSTTFLEAPILDHHCKGRSGGSSSNNEFERFDDEQFMSMFSDEASGNTNNNNINNTMMPHTLSSSNPSTPSDHNSINDEKEIMNKEKVEEEEKKQVKNESYEDESQCKQEITQLPNNDDSNNNSNANATTCSSDKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKKMDNAAGSPSQSPSPSSKPRCETHIEKEQLINV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03562 334 MobiDBLite consensus disorder prediction 106 135 - -
Pste1g03562 334 MobiDBLite consensus disorder prediction 169 197 - -
Pste1g03562 334 Coils Coil 135 166 - -
Pste1g03562 334 PANTHER BASIC LEUCINE ZIPPER 34 1 321 - -
Pste1g03562 334 Pfam bZIP transcription factor 202 246 IPR004827 GO:0003700|GO:0006355
Pste1g03562 334 CDD bZIP_plant_RF2 203 253 IPR044759 GO:0003700|GO:0006355
Pste1g03562 334 MobiDBLite consensus disorder prediction 136 168 - -
Pste1g03562 334 MobiDBLite consensus disorder prediction 106 197 - -
Pste1g03562 334 SMART brlzneu 198 262 IPR004827 GO:0003700|GO:0006355
Pste1g03562 334 FunFam Basic leucine zipper 61 201 274 - -
Pste1g03562 334 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 205 220 IPR004827 GO:0003700|GO:0006355
Pste1g03562 334 MobiDBLite consensus disorder prediction 296 334 - -
Pste1g03562 334 MobiDBLite consensus disorder prediction 298 320 - -
Pste1g03562 334 Gene3D - 201 272 - -
Pste1g03562 334 SUPERFAMILY Leucine zipper domain 202 256 IPR046347 GO:0003700|GO:0006355
Pste1g03562 334 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 200 252 IPR004827 GO:0003700|GO:0006355
Pste1g03562 334 Coils Coil 281 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03562 Pste-Chr1 16870052 16873435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03562 1 279 bZIP Transcription Factor Family AT3G58120 58.086 5.93e-99 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste1g03562 bZIP_1 3.6e-09 CL0018