Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03554 CCTATAAATACCTCAAATGTTCAACTTGTTTTGTCACACACACTCTTCTTCTTTTTATTCCTTCACCTATCACAACCCACTCACACTCACATAAAGATGGAACTAAGCACCATGTTTTGCTTGTGTGCTTTTCTCTTCATTCTTCTCTTCAGGACACTCATCAGACCCTTTCTCTCCAAACGCCGTGACTTGCCACTCCCACCTGGCACCATGGGTTGGCCTTACGTAGGAGAAACCTTTCAAATGTATTCTCAAGACCCAAATGTCTTCTTTGCCACAAAAATTAAAAGGTATGGCTCTATGTTCAAGTCCCACATTCTGGGTTGTCCCTGCGTCATGATTTCCAGCCCCGAGGCTGCCAAGTTTGTGCTCAACAAAGCTCAACTGTTCAAGCCAACATTCCCTGCAAGCAAAGAGAGGATGTTGGGAAAACAAGCCATCTTCTTTCACCAAGGAGAGTACCATGCTAACTTGAGAAGGCTTGTTCTTCGCACCTTCATGCCAGAAGCCATAAAAGCATTGTTCCTGACATTGAATCCGTGGCCCAAGCTTGCCTCAACTCATGGGAAGGTCTTCACCTTCAATGTTGCTCTGCTTTCGATTTTTGGGAAAGAAGAAATTCTGTACAGAGATGCCCTGAAACGTTGCTACTACACTCTGGAGCAAGGGTACAATTCAATGCCTATTAACATTCCGGGGACACTGTTCCACAAGGCCATGAAGGCAAGGAAGGAGCTTGCACAGATCTTGGCCCAAATAATCTCAAGCAGGAGGCAGAGGAAGCAGGATTACAAGGACCTGTTGGGTTCATTCATGGGTGAGAAAGCAGGGCTCACTGACGAGCAGATAGCAGATAATGTAATTGGCGTCATATTTGCAGCTCGTGACACCACGGCCAGTGTGCTGACGTGGATCGTCAAGTACCTTGGTGAAAACCCCAGTGTCCTGGAAGCTGTTACAAAGGAGCAAGAGTCCATATTGAAGAGCAAGGAAGAAAGTGGAGAAGATAAGGGTCTAAATTGGGAAGATGCCAAAAAGATGCCAATAACTTCAAGGGTTATTCAGGAGACTTTAAGAGTTGCTTCAATTTTGTCTTTTACTTTCAGAGAAGCAGTAGAGGATGTTGAATATCAAGGTTATCTGATACCAAAAGGGTGGAAAGTGTTGCCTCTATTTAGGAATATACACCACAGTCCAGACAACTTCAAGGAGCCAGAAAAATTTGATCCCTCAAGATTTGAGGCTGCTCCAAAACCCAATACTTTCATGCCATTTGGCAGTGGGATCCACATGTGTCCAGGAAATGAGTTAGCCAAGTTAGAGATTTTGGTCCTGCTACATCATCTGACCACAAAGTACAGGTGGTCTGTTGCGGGTGCAAAGAACGGGATTCAATATGGCCCTTTTGCTCTTCCCCAAAATGGCTTACCCATCACACTATATCCCAAGAACAAGTAGATATCATATCACTCAAACAAATGTTACATCCAACCCTGGTTTCATAGTAGCTCTCTAAATATGGAAAGAATGGCTTGACAGCTCTCAAAATTGGTTTCCACATTCTGCAGATAATTATAAATACATAGACCATATTGCAATCGGATGACCAAACAAGGGAGATAAACCCTTCCCTTCTTTTTGGCCAAGAGAAACCCAAAGGGGTAGTCTTGACAAGAATAGCATACAAACAGGACGTCAAGTGTATATAGAGGAGGTTTCACAGCCAGAGAAGATAGTATTAAGTTCTTTTCTTTTCCTCACTTTTTTTAATTTTTTTCTCTCCTTCAAATTGAGGAAAAGTCTTCAAGATTGTATTGATGAATTCAACGAATTAGTTTGGGTATCCATAAGAAAGCCGCAAGGCCAAAATAAAGTGAAATATTAATTGGTACTGAGATGAGTTTCAAACAAAGCACATATATCTGGCTATTGTTGGTATATTGTACGCCTGAGTAGAAATTAATCCA 1967 0.424 PINTSNVQLVLSHTLFFFLFLHLSQPTHTHIKMELSTMFCLCAFLFILLFRTLIRPFLSKRRDLPLPPGTMGWPYVGETFQMYSQDPNVFFATKIKRYGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTFMPEAIKALFLTLNPWPKLASTHGKVFTFNVALLSIFGKEEILYRDALKRCYYTLEQGYNSMPINIPGTLFHKAMKARKELAQILAQIISSRRQRKQDYKDLLGSFMGEKAGLTDEQIADNVIGVIFAARDTTASVLTWIVKYLGENPSVLEAVTKEQESILKSKEESGEDKGLNWEDAKKMPITSRVIQETLRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEAAPKPNTFMPFGSGIHMCPGNELAKLEILVLLHHLTTKYRWSVAGAKNGIQYGPFALPQNGLPITLYPKNK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03554 485 FunFam Abscisic acid 8 57 482 - -
Pste1g03554 485 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03554 485 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03554 485 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03554 485 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03554 485 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03554 485 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03554 485 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03554 485 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03554 485 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03554 485 CDD CYP90-like 95 482 - -
Pste1g03554 485 Gene3D Cytochrome P450 58 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03554 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Pste1g03554 485 SUPERFAMILY Cytochrome P450 60 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03554 485 PANTHER CYTOCHROME P450 26 63 458 - -
Pste1g03554 485 Pfam Cytochrome P450 223 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03554 485 Pfam Cytochrome P450 67 170 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03554 Pste-Chr1 16828533 16831404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03554 33 454 Cytochrome P450 AT5G45340 71.330 0.0 634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03554 1 16828533 16831404 Pste1g03554 1 16828533 16831404 ECH
Pste1g03554 1 16828533 16831404 Pste7g00589 7 5478961 5481512 PCT