Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03552 CTCTGAGATGTTGTCACTGCGTTGGAAGAAGGTAAACCCTTCCATGGTGTTGTTGCAGCTAAGCTGAAGAAACATGGTGGGTCCCATTCTTCGTTCTCTCTGGTCCTCCACTAGAAAATCGTTCTCTTCTTCTTCTCCTCCTTTATCCCACTCTCGCTTCTTCTCTCGCGCCTTCTCCGTCGCTCCCGCGGCAGCCACCGCCGCCGCAGCCGCTAGCGCCTCCTCCCTCGACCCCAGCCACCTCCGCAACGTCGCCGTCATCGCCCATGTCGACCACGGCAAGACCACGCTCATGGACCGCCTCCTCCGCCAGTGCGGCGCCGACATCCCCCACGAGCGCGCCATGGACTCCATCTCGCTCGAGCGTGAGCGCGGCATCACCATCGCCTCCAAGGTTACGTCTGTTTCGTGGAAGGAGAATGAGCTGAACATGGTTGATACTCCCGGCCATGCTGATTTTGGTGGCGAGGTTGAGCGTGTTGTTGGTATGGTTGAGGGAGCGATTTTGGTTGTTGATGCCGGTGAAGGACCTCTTGCACAAACGAAATTTGTTCTTGCAAAGGCCTTGAAATACGGGTTGCGGCCTATTCTTCTTTTAAACAAAGTAGACCGACCTTCAGTTACTGAGGAGACATGTGATGAAGTTGAGAGCCTGGTATTTGATCTATTTGCTAACCTGGGTGCTACAGAGGAGCAACTAGACTTTCCTGTTCTTTATGCTTCTGCTAAAGAAGGATGGGCGTCTACCACATTTACCAAAGATCCTCCTGCTGAGGCAAAAAATATGTCACAGTTGCTTGATGCTGTTGTTTCAATGATGGAACGGGATTTCTATCTTGGTCGAATTTTGACTGGACGGATATTCTCTGGGGTTGTTCGAGTTGGTGACAGGGTTCATGGACTGCGCAATAAAGATTCTGGTCCTGAAAAGATTGAAGAGGGAAAGGTAGTGAAACTGATGAAAAAGAAGGGTACAAACATGGTTCTAACTGATTGTGCTGGAGCTGGTGATATAATATCTGTTGCTGGTCTTTCAAGTCCATCAATAGGCCATACAGTGGCAACGGTGGAGATTATGTCTGCTTTGCCCACAGTTGAATTGGATCCTCCAACAATTTCCATGACTTTTGGTGTAAACGACTCCCCATTGGCTGGTCGTGATGGCACTCATTTGACTGGGGGGAGAATTGGTGACCGACTGATGGCTGAAGCTGAAACCAACCTTGCCATTAATGTGCTTCCAGGCTTATCAGAATCATTTGAAGTTCAGGGAAGAGGAGAGCTACAGCTGGGTATTTTAATTGAGAACATGAGACGCGAAGGATTTGAGTTATCTGTCTCTCCACCAAAAGTCATGTATAAAATTGAAAAAGGTGAGAAGCTTGAGCCTGTAGAAGAAGTTACAATTGAGGTAAATGATGAGCATGTTGGTTTGGTAATGGAAGCCTTGTCTCATAGACGAGCGGAGGTTAATGACATGGGTCCTGTCTCAGGAGCTGTTGGTCGAACTAGATTGTGTTTGACTTGTCCATCAAGGGGCTTGGTTGGGTACAGGAGTGTGTTCAGCAGTGACACACGAGGAACTGGATTCATGCATCGTGCTTTCCATGCATATGAAAAATTTCGGGGTCCTCTTGGCCATGTCAGGAAAGGAGTACTGGTGTCAATGGGTTTTGGTACAATCACAGCTCATGCATTGATGAGCTTAGAAGCTCGAGGGACACTTTTTGTAACTCCTGGAATGGAGACGTATGATGGAATGATTGTTGGTGAACATTCACGGGATACAGATCTTGACGTCAATCCTGTGAGGGCTAAAGAACTTACAAATGTCCGTGCTGCTACCAAAGATGACAATGTGAAGCTGACTCCCCCCCGCCTTATGACACTTGAAGAAGCTATAGGGTATGTAGCTTCGGATGAGCTTATTGAGGTTACACCAAAATCCATCCGTTTGCGGAAGAAATACCTTGATGTTAACAAGCGTAAAGCCATGAGCAAAAAACCAAAGGAATGAAGAGCCCAAGAAGCCATGAGTTGAGGAGTTTTTATCCTCAATTAAATTTTGTAAAATTAATTTACTCAGTGTACGGTATAGTCATTACAAAGCAATTTTTTTCATACCAGGTTCTGCCATAATTCAAGTAGCAGAAAGAAATATTCTTTGGTAGTGATAACTGATAAGACATCTCAATTTTGTATTTTATAATGTTATAGAAATTGTATTTGCTAAGGAGGGGTTAATAATTTGCAGTAAAACAAGTTGCTCATTGTGATGTAATATCTAAAAAGTCTGTTTAGAA 2303 0.4568 MVGPILRSLWSSTRKSFSSSSPPLSHSRFFSRAFSVAPAAATAAAAASASSLDPSHLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVSWKENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDRPSVTEETCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASTTFTKDPPAEAKNMSQLLDAVVSMMERDFYLGRILTGRIFSGVVRVGDRVHGLRNKDSGPEKIEEGKVVKLMKKKGTNMVLTDCAGAGDIISVAGLSSPSIGHTVATVEIMSALPTVELDPPTISMTFGVNDSPLAGRDGTHLTGGRIGDRLMAEAETNLAINVLPGLSESFEVQGRGELQLGILIENMRREGFELSVSPPKVMYKIEKGEKLEPVEEVTIEVNDEHVGLVMEALSHRRAEVNDMGPVSGAVGRTRLCLTCPSRGLVGYRSVFSSDTRGTGFMHRAFHAYEKFRGPLGHVRKGVLVSMGFGTITAHALMSLEARGTLFVTPGMETYDGMIVGEHSRDTDLDVNPVRAKELTNVRAATKDDNVKLTPPRLMTLEEAIGYVASDELIEVTPKSIRLRKKYLDVNKRKAMSKKPKE 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03552 647 CDD BipA_TypA_II 240 339 IPR047042 -
Pste1g03552 647 Gene3D - 429 523 - -
Pste1g03552 647 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 55 253 IPR000795 GO:0003924|GO:0005525
Pste1g03552 647 CDD BipA_III 346 423 IPR047043 -
Pste1g03552 647 Gene3D - 47 230 IPR027417 -
Pste1g03552 647 Pfam Elongation factor G C-terminus 436 519 IPR000640 -
Pste1g03552 647 Gene3D Translation factors 237 340 - -
Pste1g03552 647 SUPERFAMILY EF-G C-terminal domain-like 344 427 IPR035647 -
Pste1g03552 647 NCBIfam small GTP-binding protein domain 58 197 IPR005225 GO:0005525
Pste1g03552 647 Gene3D Elongation Factor G (Translational Gtpase), domain 3 347 631 - -
Pste1g03552 647 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 92 107 IPR031157 -
Pste1g03552 647 FunFam GTP-binding protein TypA 524 610 - -
Pste1g03552 647 PRINTS GTP-binding elongation factor signature 59 72 IPR000795 GO:0003924|GO:0005525
Pste1g03552 647 PRINTS GTP-binding elongation factor signature 119 129 IPR000795 GO:0003924|GO:0005525
Pste1g03552 647 PRINTS GTP-binding elongation factor signature 99 107 IPR000795 GO:0003924|GO:0005525
Pste1g03552 647 PRINTS GTP-binding elongation factor signature 135 146 IPR000795 GO:0003924|GO:0005525
Pste1g03552 647 PRINTS GTP-binding elongation factor signature 171 180 IPR000795 GO:0003924|GO:0005525
Pste1g03552 647 FunFam GTP-binding protein TypA 347 456 - -
Pste1g03552 647 SUPERFAMILY Translation proteins 202 339 IPR009000 -
Pste1g03552 647 Pfam Elongation factor Tu GTP binding domain 57 249 IPR000795 GO:0003924|GO:0005525
Pste1g03552 647 FunFam GTP-binding protein TypA 429 523 - -
Pste1g03552 647 FunFam GTP-binding protein TypA 56 252 - -
Pste1g03552 647 Pfam Elongation factor Tu domain 2 256 329 IPR004161 GO:0005525
Pste1g03552 647 Gene3D bipa protein 524 639 IPR042116 -
Pste1g03552 647 FunFam Elongation factor family protein 236 340 - -
Pste1g03552 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 250 IPR027417 -
Pste1g03552 647 SUPERFAMILY EF-G C-terminal domain-like 438 554 IPR035647 -
Pste1g03552 647 NCBIfam translational GTPase TypA/BipA 57 639 IPR006298 GO:0003924|GO:0005525
Pste1g03552 647 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 54 227 - -
Pste1g03552 647 CDD BipA_TypA_C 438 518 IPR035651 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03552 Pste-Chr1 16815949 16826198 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03552 57 180 Eukaryotic Initiation Factors Gene Family AT3G22980 43.077 3.25e-25 109