Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03547 CATTGGTATAGGTATGATGGTATTTAATTTGATGTATTTGTAGGATATGAGTCCGATCCTTACCAACTGAATTGGCCTTTGTTAGCCTTTTATATTTATTCTTAGAATTTTCTGACATGCTGTTATTTAATTGTGCTCATAGTGCTCTACATTGATTATTCTGTGATATTTGTGCAAGGTATGATGAGAGAAAGCTCCAAGGGCAAGTCTGGATCCTCTTCTCTTCAATCCATGAAGGAGAAGGAAAAACACCTGGTGGATAAAATTCAAGGGATTTTCAACAATCTTCAGTGTGCAAGAAAGGAGGGCAGGGGCAATGACATTGTGATCTTTGAGGAGCAGATGCATCAGATGCTGCGAGAGTGGAAGGCAGAACTGGAGTCTCCAGCCACCTCCTTAGCTGATGGAAGTTTTGATTCGTTTACCAGTGAACTAGCCCAACTGTTGCAAGTGATTGAGGAGAAAGATGATGCAACTAGTCCACTAACAAAACCTGGGCCGTTGAAGACTGAGCTCCAAGCTAATCACATTAGTGATGGCAATTTTCAGTTTTATCAAGAAAAGCATTTTGATGATAACCAACCACTAGATCATACCTTTGAAGGCTCTGCTTCAACTCTGTACAACAATGCTTTTAATAACTCAGTTATGACACAGTTGGATTATCATCCCTTCAGTTTAAATCAAGATATGGATCACAACCCAGTAGGTCACAACTCGGATTTGATTGATCAGTTGGATTTATATCAAGACCTCAGGCACAACACAGAAATGAAAAGCTCAGAATCAACTCATTTTAGTTTAGAAGGTTTTGATTGTAGCCAGTTCTTTGAAGCTGATGACACTGTACAGCATGGAGAGAATATTATACCTAACATTCTTCCAAATATCTGCCCTCCACCTTCTGCTTTCTTGGCCCCAAAATGTGCACTATGGGATTGTTTCAGACCTGCTCAAGCGGTAGAATGGTGCCAGAACTACTGTAGTAGTTGCCATGAGCTTCTGGCAAATAATGAGGGTCTTCCTGGCATGAATCCAATTTTGCGACCTGGGGGCATTGGTGTAAAAGATGGGCCTTTGTTTGCTGCTGTTCTTGCTAAGACACAGGGAAAGGAAGTGGGCATCCCTAAGTTTTTTGATCTTTCTTTTCTTGAGGGTGAAACTGTTAGGGAGTGGCTCTTCTTTGACAAGCCTAGAAGGGCATTTGAAAGTGGAAACAGAAAACAGAGATCACTTCCAGATTACAGTGGGCGTGGTTGGCATGAATCAAGGAAGCAAGTGATGAAGGAACATGGGGGACAAAAGAGATCTTATTACATGGATCCCCAGCCTCTTAGTTATCTTGAGTGGCATTTGTACGAGTATGAGATCAATAATCATGATGGTTGTGCATTATACAGACTAGAATTAAAGCTTGTGGATAAAAAGAAAAGTCCTAAAGGAAAAGTGACCAAAGAATCCCTTAATGATTTACAGAACAAGATGGGACAGCTTACTGCTGCTGTTCCATCACCTGATGATGGACAACCAATCAAGGGAAAAACAATGGCCAAGTCTGAGAATGATGGATCTCCTAAAAAGTAAATTAATACACCATAGGGCAATTTTACCGTATGACTGACCAATGTGTACATATTTGAAGATGGATGGATCTCTTGCATGTGAACATTTCTGACTTTCCTTGAACAAAGTTAAAAGGCTAATAGAATTTTCTTGTGGTAGATGGTGCTCACAGTCATGTGCTGAATTTGTCGTTATTCTTGTCTCGGATATATTGAATTATTTGAAGTCTACACGTAAGAATATCATTATGTGCTACATAGATTAAAAATTGGATATATTCTGTAAGGACTTTGCAATCTGCATACTTTCTGATGGATCATTGGGAGTTTTTCTTTGTTAGCTAGCCTATCACCCAAATTTCTGACATTCTTAAAATTTAGTTGCCTGTATTTGGTTGTAAATGTTCCCTAATGGGGGGATTAGTTTTAACTTACATTACTGGGACATGTGCTGCAATTCCATGGGAATGCAACATAGAATTTCTGTATAGTTGAATGAGACATCATTGCTTAGTGTC 2080 0.3942 MMRESSKGKSGSSSLQSMKEKEKHLVDKIQGIFNNLQCARKEGRGNDIVIFEEQMHQMLREWKAELESPATSLADGSFDSFTSELAQLLQVIEEKDDATSPLTKPGPLKTELQANHISDGNFQFYQEKHFDDNQPLDHTFEGSASTLYNNAFNNSVMTQLDYHPFSLNQDMDHNPVGHNSDLIDQLDLYQDLRHNTEMKSSESTHFSLEGFDCSQFFEADDTVQHGENIIPNILPNICPPPSAFLAPKCALWDCFRPAQAVEWCQNYCSSCHELLANNEGLPGMNPILRPGGIGVKDGPLFAAVLAKTQGKEVGIPKFFDLSFLEGETVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNHDGCALYRLELKLVDKKKSPKGKVTKESLNDLQNKMGQLTAAVPSPDDGQPIKGKTMAKSENDGSPKK 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03547 467 MobiDBLite consensus disorder prediction 1 21 - -
Pste1g03547 467 MobiDBLite consensus disorder prediction 1 15 - -
Pste1g03547 467 PANTHER TRANSCRIPTION FACTOR VOZ1 2 461 IPR039277 GO:0006355|GO:0048578
Pste1g03547 467 MobiDBLite consensus disorder prediction 345 375 - -
Pste1g03547 467 MobiDBLite consensus disorder prediction 425 439 - -
Pste1g03547 467 MobiDBLite consensus disorder prediction 418 467 - -
Pste1g03547 467 MobiDBLite consensus disorder prediction 354 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03547 Pste-Chr1 16779390 16783151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03547 1 443 VOZ-9 Transcription Factor Family AT1G28520 49.458 5.30e-143 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Pste1g03547 None None None