Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03544 GTTGTGGTAGCAAAATATGGATTTTGATAATGAAGACCATTCTGCCAAACTACTTCGAGCTCAAATTCACATATTTAATCAAACTTTCAGTTTCATAAATTCTATGTCCCTTAAATGTGCAATTGATTTGTGCATACCAGATGTCATACACAAGTATGACCAACCCATGCCACTCTCTCAACTCATTAGTGCATTACCAATTCACCCATGTAAGGCTTCTTTCGTTGCCCGTTTGATGCAAATTTTGACTCATTCAGGTTTCTTTACTCAACACAATGCCACTGAAAATGAACAAGAAGTGAGTTATGTGCTAACTGATGCATCTAGACTACTCCTTAAGGACCACCCTTTTAGTTTGACAAGTTTGCCAAAAGTCATACTTGATCCCATTTTGGTGAATCCATGGTTTCAATTATCTAATTGGTTCACAAATGAAGACCCTACACCATTTCATACAGAAAATGGGATGACATTTTGGGATTTTGCTGGGTGTGAGCCTAAACTCAATCACCTTTTTAATGATGCCATGACTAATGACACTCGATTGGTTTCTAGTGTTGTAATTGAGAAGTGTAAGGGAGTGTTCGAGGGATTAGAGTCATTGGTTGATGTTGGAGGAGGAACAGGAACTATGGTTAAGGCCATTGCTAACTCATTTCCACAATTAAAGTGTATTGTATTTGATCTCCCACATGTTGTTGATGGCTTGCAAGAAACAGGGAACATAAAATATGTTGAAGGGGACATGTTTGAAGCCATTCCTTCTGCTGATTCAATTGTACTGAAGTCAATATTGCATAACTGGAACGATGAGGAATGCTTGAAAATCCTGAAGAGATGTAAGGAGGCAATCACAAACAAAGATAAAGGAAAAGTGATTATCATAGACGTGGTTTTAGGAAACGAGAAAGAAGACAGTGAATTAAATCAAACCAAGCTCTTCTATGATGTGGAGATGATGGTGTTAGTTACAGGGAAAGAGAGAAACGAGAGAGATTGGGCGAAGTTGATTTTCTCTGCAGGTTTTAGTAATTATAAGATAACTCCCATTCTAGGTTTGAGGTCTCTCATCGAGGTTCATGCATAGTATGATAGTTGAAGAAAACGATGATGGGTGGATATTTTGTAATCTC 1133 0.3786 MDFDNEDHSAKLLRAQIHIFNQTFSFINSMSLKCAIDLCIPDVIHKYDQPMPLSQLISALPIHPCKASFVARLMQILTHSGFFTQHNATENEQEVSYVLTDASRLLLKDHPFSLTSLPKVILDPILVNPWFQLSNWFTNEDPTPFHTENGMTFWDFAGCEPKLNHLFNDAMTNDTRLVSSVVIEKCKGVFEGLESLVDVGGGTGTMVKAIANSFPQLKCIVFDLPHVVDGLQETGNIKYVEGDMFEAIPSADSIVLKSILHNWNDEECLKILKRCKEAITNKDKGKVIIIDVVLGNEKEDSELNQTKLFYDVEMMVLVTGKERNERDWAKLIFSAGFSNYKITPILGLRSLIEVHA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03544 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Pste1g03544 356 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Pste1g03544 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 354 IPR029063 -
Pste1g03544 356 Pfam O-methyltransferase domain 130 338 IPR001077 GO:0008171
Pste1g03544 356 PANTHER O-METHYLTRANSFERASE 13 341 IPR016461 GO:0008168
Pste1g03544 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 356 IPR016461 GO:0008168
Pste1g03544 356 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Pste1g03544 356 Gene3D Vaccinia Virus protein VP39 107 355 IPR029063 -
Pste1g03544 356 Gene3D - 2 106 IPR036388 -
Pste1g03544 356 SUPERFAMILY "Winged helix" DNA-binding domain 9 111 IPR036390 -
Pste1g03544 356 FunFam O-methyltransferase ZRP4 108 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03544 Pste-Chr1 16752338 16753722 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03544 30 342 Monolignol Biosynthesis Gene Families AT5G54160 34.375 1.06e-53 179
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03544 1 16752338 16753722 Pste1g03544 1 16752338 16753722 ECH