Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03541 TGATGAACGTACTACAAAATTACTTGAAGCTCAAACCCACGTAAGGAATCATATGCTCAAATTCATAAACTCTATGTCCCTCAAATGTGCAGTTGATTTAAGCATACCAGATATCATACACAACTATGGCCACCCGATGCCACTCTCACAACTCGTTGCTACACTTCCAATTCACCCAACCAAGGCTCACTTCGTCTACCGATTGATGAGAATTTTAACTCATTCTGGTTTCTTTTCTGAGCACAATGCCACCGAAAATGAGCTTGAAGTGAGGTATGTGCTAACTGATGCGTCTACACTACTCCTTAAGGACCATCCCTTTAGTATGACATCTTTGTTGCAAGCCTTAACTGATCCAATGTTTATTAATCCATGGTTTCAATTATCTAATTGGTTCACAAATGAAGACCCTACACCATTTCACACAAAATGGAATGACATTTTGGGATTTTGCTGGCCTAAATTCAATCACCTTTTCAACGATGCCATGGCCAGTAATAGTCGATTGATATCAAGTGTGGTGACTGAGAAGTGCAAGGGAATGTTCGATGGGTTAGAGTCAATGGTCGATGTCGGTGGGGGAACAGGAACCATGGCTAAGGCCATTGCCAACTCATTTCCGGAACTAAAGTGCATTGTATTTGATCTCCCACATGTTGTTGCTGACTTGCTAGAAACTGACAACATAACATATGTTGGAGGGAACATGTTTGAAGCAATTCCACCTGCTGATTCAGTTATGTTGACGCTCTACAACCTACGTGACCATCTTGAAATTGCAAGTGCTATGATGGTGTTTGTCAGTGGAAGAGAAAGAAATGAGAAAGAATGGGCCAACTTGATTTTCTCTGCTGGTTTCAGGGACTACAAGATAACTGCATATCTGGGTTCAATCAAATTATATATGGAATCCCACGGTGAAGAATTGCTTCGTGCTCAAACCCACGTTTGGAATCATATTTTCAAATTCATAAGCTCTATGTCCCTTAGATGCGCAATTGACTTAGGCATTCCAGACGTCATACACAGTTATGGCCAACCCATGCCACTCTCAGAACTCATTGCTTCACTACCAATCCACCATGCCAAAACTTGCTTCATCTACCGCTTGATGCGGATTTTAACTCATTCTGGTTTCTTTTCTGAGCACAATGTCACTGAAAATGAGCTTGAAGTGAGGTATGTGTTAACTGATGCATCTAAACTACTCCTTAAGGATCATCACTCAGGTATGTCATCTTTGTTACAACTCATAGTTGATCCAGTTTATATCAATCCATGGTTTCAATTCTCTAACTGGTTTACAAATGAAGACCCTACACCATTTCACACACAAAATGGGATGACATTTTGGGATTTAGCTACATGTGAACCTAAATTTAACAAGTTGTTCAATGAAGCTATGGCTAGCCACACTGAATGGGTTTCTAGTGTGGTAGTTGAGAAGTGCAAGGGGCTATTCAAGGGATTAGAGTCATTGGTTGATGTTGGAGGAGGAACAGGGACCATGGCTAAGGTCATTGCTAAGTCATTCCCACAACTAAAGTGCACTGTATTGGATCTGCCTCACGTTGTTGCTAACTTGCAAGGAACTGAGAATGTAAAATATGTCGGAGGGGACATGTTTGAGGCAATTCCTTCGGCTGATTGCATTATGTTGAAGTGGGTATTGCATAATTGGAATGACGAAGAATGTGTGACAATACTGAAAAAGTGCAAGGAGGCAATAAATAGAGGCGATGGAAAGGTTATTATCATAGACTTGGTGATGGAGAATAAGAAGGAAGACGATAAATTAACACAGACCCAGTTGTTCTTTGATATGCAAATGTTGGTGTTCTTCACTGGAAAAGAAAGAAACGAGAAAGAATGGGCCAACCTGATTCACTCTGCTGGTTTCAGTAACTACAAGATTACTCCATCTGTAGGTTTAGTTTCTATCATTGAGGTTTGTCCATAGTGTTACGTATACCATTAAACTATTGCAAGACAAGGAC 1997 0.4056 MLKFINSMSLKCAVDLSIPDIIHNYGHPMPLSQLVATLPIHPTKAHFVYRLMRILTHSGFFSEHNATENELEVRYVLTDASTLLLKDHPFSMTSLLQALTDPMFINPWFQLSNWFTNEDPTPFHTKWNDILGFCWPKFNHLFNDAMASNSRLISSVVTEKCKGMFDGLESMVDVGGGTGTMAKAIANSFPELKCIVFDLPHVVADLLETDNITYVGGNMFEAIPPADSVMLTLYNLRDHLEIASAMMVFVSGRERNEKEWANLIFSAGFRDYKITAYLGSIKLYMESHGEELLRAQTHVWNHIFKFISSMSLRCAIDLGIPDVIHSYGQPMPLSELIASLPIHHAKTCFIYRLMRILTHSGFFSEHNVTENELEVRYVLTDASKLLLKDHHSGMSSLLQLIVDPVYINPWFQFSNWFTNEDPTPFHTQNGMTFWDLATCEPKFNKLFNEAMASHTEWVSSVVVEKCKGLFKGLESLVDVGGGTGTMAKVIAKSFPQLKCTVLDLPHVVANLQGTENVKYVGGDMFEAIPSADCIMLKWVLHNWNDEECVTILKKCKEAINRGDGKVIIIDLVMENKKEDDKLTQTQLFFDMQMLVFFTGKERNEKEWANLIHSAGFSNYKITPSVGLVSIIEVCP 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03541 635 FunFam Coniferyl alcohol 9-O-methyltransferase 1 84 - -
Pste1g03541 635 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 231 IPR016461 GO:0008168
Pste1g03541 635 FunFam Coniferyl alcohol 9-O-methyltransferase 283 386 - -
Pste1g03541 635 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 300 635 IPR016461 GO:0008168
Pste1g03541 635 Pfam O-methyltransferase domain 410 617 IPR001077 GO:0008171
Pste1g03541 635 Pfam O-methyltransferase domain 136 232 IPR001077 GO:0008171
Pste1g03541 635 CDD AdoMet_MTases 476 573 - -
Pste1g03541 635 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 393 633 IPR029063 -
Pste1g03541 635 PANTHER O-METHYLTRANSFERASE 293 620 IPR016461 GO:0008168
Pste1g03541 635 Gene3D Vaccinia Virus protein VP39 387 635 IPR029063 -
Pste1g03541 635 Gene3D Vaccinia Virus protein VP39 85 237 IPR029063 -
Pste1g03541 635 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 89 279 IPR029063 -
Pste1g03541 635 FunFam O-methyltransferase ZRP4 388 635 - -
Pste1g03541 635 SUPERFAMILY "Winged helix" DNA-binding domain 2 89 IPR036390 -
Pste1g03541 635 SUPERFAMILY "Winged helix" DNA-binding domain 289 390 IPR036390 -
Pste1g03541 635 Pfam Dimerisation domain 8 56 IPR012967 GO:0046983
Pste1g03541 635 Pfam Dimerisation domain 310 358 IPR012967 GO:0046983
Pste1g03541 635 Gene3D - 1 84 IPR036388 -
Pste1g03541 635 Gene3D - 286 386 IPR036388 -
Pste1g03541 635 Gene3D Vaccinia Virus protein VP39 238 285 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03541 Pste-Chr1 16718617 16727240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03541 310 633 Monolignol Biosynthesis Gene Families AT5G54160 32.219 3.08e-53 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03541 1 16718617 16727240 Pste1g03541 1 16718617 16727240 ECH