Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03535 CAAATTATATATGGAATCCAATAGTGATGAACGTACTACAAAGTTACTTGAAGCTCAAACCCACGTAAGGAATCATATGCTCAAATTCATAAACTCTATGTCCCTCAAATGTGCAGTTGATTTAAGCATACCAGATATCATACACAACTATGGCCACCCGATGCCACTCTCACAACTCGTTGCTACACTTCCAATTCACCCAACCAAGGCTCACTTCGTCTACCGATTGATGAGAATTTTAACTCATTCTGGTTTCTTTTCTGAGCACAATGCCACCGAAAATGAGCTTGAAGTGAGGTATGTGCTAACTGATGCGTCTACACTACTCCTTAAGGACCATCCCTTTAGTATGACATCTTTGTTGCAAGCCTTAACTGATCCAATGTTTATTAATCCATGGTTTCAATTATCTAATTGGTTCACAAATGAAGACCCTACACCATTTCACACACAAAATGGAATGACATTTTGGGATTTTGCTGGGTGTGAGCCTAAATTCAATCACCTTTTCAACGATGCCATGGCCAGTAATAGTCGATTGATATCAAGTGTGGTGACTGAGAAGTGCAAGGGAATGTTCGATGGGTTAGAGTCAATGGTCTATGTCGGTGGGGGAACAGGAACCATGGCTAAGGCCATTGCCAACTCATTTCCGGAACTAAAGTGCATTGTATTTGATCTCCCACATGTTGTTGCTGACTTGCTAGAAACTGACAACATAACATATGTTGGAGGGAACATGTTTGAAGCAATTCCACCTGCTAATTCAGTTATGTCGACGATTATTATCCTAGACTTGGTGATGGCAGAGAATAAGAAGGAAATTGATGATAAAATAGCTGAGACGCAACTATTCTATGATATGCATATGATGGTTTTTCTCACTGGAAGAGAAAGAAAGGAGAAAGAATGGGCCAACTTGATTTTCTCTGCTGGTTTCAGTGACTATAAGATAACTGCATCTCTGGGTTTAATGTCTTGGATATTGCATGATTGGAATGATGAAGAATGTGTGAAAATATTGAAGAAAAACAAGGAGGCAATAACAAGCTACGGAAAGATTATTATCATAGACTTGGTGATGGCAGAGAATAAGAAGGAAATTGATGATAAATTAGCTGAGACGCAACTATTCTTTGATATGCATATGATGGTTTCTGTCACTGGAAGAGAAAGAAAGGAGAAAGAATGGGCCAACTTGACTTTCTTTGCTGGTTTCAGTGACTACAAGATAACTGCATCTTTGGGGTTAAAGTCTGTCATTGAGGTTTATCCG 1276 0.3926 MESNSDERTTKLLEAQTHVRNHMLKFINSMSLKCAVDLSIPDIIHNYGHPMPLSQLVATLPIHPTKAHFVYRLMRILTHSGFFSEHNATENELEVRYVLTDASTLLLKDHPFSMTSLLQALTDPMFINPWFQLSNWFTNEDPTPFHTQNGMTFWDFAGCEPKFNHLFNDAMASNSRLISSVVTEKCKGMFDGLESMVYVGGGTGTMAKAIANSFPELKCIVFDLPHVVADLLETDNITYVGGNMFEAIPPANSVMSTIIILDLVMAENKKEIDDKIAETQLFYDMHMMVFLTGRERKEKEWANLIFSAGFSDYKITASLGLMSWILHDWNDEECVKILKKNKEAITSYGKIIIIDLVMAENKKEIDDKLAETQLFFDMHMMVSVTGRERKEKEWANLTFFAGFSDYKITASLGLKSVIEVYP 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03535 422 Gene3D - 1 106 IPR036388 -
Pste1g03535 422 Gene3D Vaccinia Virus protein VP39 255 319 IPR029063 -
Pste1g03535 422 Gene3D Vaccinia Virus protein VP39 320 422 IPR029063 -
Pste1g03535 422 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 422 IPR016461 GO:0008168
Pste1g03535 422 PANTHER O-METHYLTRANSFERASE 321 407 IPR016461 GO:0008168
Pste1g03535 422 SUPERFAMILY "Winged helix" DNA-binding domain 9 111 IPR036390 -
Pste1g03535 422 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 321 420 IPR029063 -
Pste1g03535 422 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 316 IPR029063 -
Pste1g03535 422 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Pste1g03535 422 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Pste1g03535 422 Pfam O-methyltransferase domain 130 262 IPR001077 GO:0008171
Pste1g03535 422 Pfam O-methyltransferase domain 317 404 IPR001077 GO:0008171
Pste1g03535 422 Gene3D Vaccinia Virus protein VP39 107 254 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03535 Pste-Chr1 16671201 16680962 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03535 322 410 Monolignol Biosynthesis Gene Families AT5G54160 36.264 1.10e-10 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03535 1 16671201 16680962 Pste1g03535 1 16671201 16680962 ECH