Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03525 ACTAGATCAGATATCAAATTATACATTGAATCCTATAGTGAAGAGAATGCTACCAAATTCTTAGAAGCTTATACCCTCATTGACGATCATAGTTTCAGAGTCATAAACTCTATGTCCCTTAATTGTGCAGTTGACTTAGGTATACCAGATATGATACACAAGTATGGGCAACCCATGCCAGTCTCAGAACTCATTGCTTCACTACCAATCCACCCATCCAAGACATGCTTCATCCCCCGCTTGATGCGAATATTGACTCATTCAGGTTTCTTCTCTCAGCACCATGTCACCGAAAATAAGCAAGAACTGAGGTATGCCCTAACTCATGCATCTACACTACTCCTCAAGGACCATCCTTTCAGTATGACATCTTTGTTGCAAGTGTTTCTTGATCCAAGCGTGATGAAGTCATGGTGCCAATTCTCTAATTGGCTCAAAATAAAGACCCGTCACCCTGAATTCAATCACCTTTACAATGATGCCATGGCTAAGGACACTGGATTCGTTTCTAGTGTGGTGATTGAGAACAACAGGGAAGTGTTCAAGGGATTAGAGTCATTAGTTGATGTTGGAGGAGGAATAGGGACTATGGCTAAGGCCATTGCTAAGTCATTCCCACAACTAAAATGCACACTCTTCGATCGTCCACACATTGTTTCTGACTTGCAAGGAACACAAAACATAAAATATGTTGGAGGGGACATGTTTCAAACAATTCCTTCCGCTCATTCTATTTTGTTGAAGTGGGTATTGCATTGTTGGAATGACGAGAAATGTGTAAAACTATTGAAAAAGGCCAAGGAGGCAATACCTAGCAACGGGAAGGTTATCATCGTGGACTTTGTGATGGAGCATAACAAGGAAGAGAGTAAATTAACTGAGACGAAGTTGTGCTGTGATATGCTTATGATGTCGCTTTTTTCAGGAAAAGATAGAAATCAGAAAGAATGGGCCGATCTGATTTTCTCTTCTGGTTTCAGTAACTACAAGATAACTCATATTTTCTATGTACATTATATAATTGAGGCTTATCCC 1035 0.401 TRSDIKLYIESYSEENATKFLEAYTLIDDHSFRVINSMSLNCAVDLGIPDMIHKYGQPMPVSELIASLPIHPSKTCFIPRLMRILTHSGFFSQHHVTENKQELRYALTHASTLLLKDHPFSMTSLLQVFLDPSVMKSWCQFSNWLKIKTRHPEFNHLYNDAMAKDTGFVSSVVIENNREVFKGLESLVDVGGGIGTMAKAIAKSFPQLKCTLFDRPHIVSDLQGTQNIKYVGGDMFQTIPSAHSILLKWVLHCWNDEKCVKLLKKAKEAIPSNGKVIIVDFVMEHNKEESKLTETKLCCDMLMMSLFSGKDRNQKEWADLIFSSGFSNYKITHIFYVHYIIEAYP 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03525 345 Pfam Dimerisation domain 38 86 IPR012967 GO:0046983
Pste1g03525 345 SUPERFAMILY "Winged helix" DNA-binding domain 19 119 IPR036390 -
Pste1g03525 345 FunFam Coniferyl alcohol 9-O-methyltransferase 10 114 - -
Pste1g03525 345 PIRSF O-mtase 6 345 IPR016461 GO:0008168
Pste1g03525 345 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 345 IPR016461 GO:0008168
Pste1g03525 345 Gene3D - 9 114 IPR036388 -
Pste1g03525 345 Pfam O-methyltransferase domain 146 327 IPR001077 GO:0008171
Pste1g03525 345 PANTHER O-METHYLTRANSFERASE 36 330 IPR016461 GO:0008168
Pste1g03525 345 Gene3D Vaccinia Virus protein VP39 115 345 IPR029063 -
Pste1g03525 345 FunFam O-methyltransferase ZRP4 146 345 - -
Pste1g03525 345 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 344 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03525 Pste-Chr1 16592052 16594283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03525 38 331 Monolignol Biosynthesis Gene Families AT5G54160 30.794 6.18e-48 164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03525 1 16592052 16594283 Pste1g03525 1 16592052 16594283 ECH