Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03524 CTGATTATTAATTAAGAGCTAAAAGCACAGGAAAAATGGAACTACATATAGAAACTTCAAATTGGACAAAAGAAGTGGTTCTAGTGTTTGTACATGTTATCTGACATCTCTGACTTCGTTCATCATTCCCATTTCTCTTTCCTCAGCTTTTCCATTATTTACACTTCTCTCTGTAATCTTATCTCCTTTTAGTTTGTCTCTCTCTCACATCACCACTTCATAGTGGTAAATACTTAAAAAAAAGTACTAATAATAGCACAATACCCGGCTTGTTGCTCATATTCTTCAAAGTCCAAAATAGCTTCTCACTGCAGAATCTTTCCCTTTTTTTTATAGTACAGTACTAGACTAGCATTTCATTTCACACTTTCTTCTTCTAATTCGTACATGCATTTTCAAGCCTTGTGCTGCTTTAAACTCCATTTCCTCACTTTTTTTGGGGTCTGTTTTTGCTTCTCTTGTGTTGTGGAGGCTCACTCTACCTTGCAAGTAAACAATTTTTGTTGTTTATTTGAGGAATTTGTCCTTACTTATAGTTTGCTTAAGCGTATGAACAATAAAATAAGTATTTGTGTTCTTTTGTTTGAGGTTGTACAATTTTTTTTCAATTACCTGTTTGAGTTGAATGCTTTAAGAAGGCTTGGGTTGTTGATCCATATAAACATGATGGCACCAAACTTGAATGCTGAACCCGATGATGAATTAGAAGTCCTGAGCCAAGTAGGTTCCGATAAATCGTTACAAGAAACATGGCATGATGATCTTAACAAGGACTGCAGCACCACTTCCTCCTGTCTCACAAAGGCTGTTTCCCTTGACTTGACTCTTAACTTGAATGCCAATGACGAAGAGTTGAAAGGTGCAAGTGATGCTGCTAGCTGTGAATTAGGAGGTGAAACTCATGGCTCAGCATCAGCAATTCCTAGAGTTTTCTCTTGTAATTATTGTAGGCGCAAATTCTTCAGCTCACAGGCATTAGGTGGCCATCAGAATGCTCATAAAAGGGAGAGGACAATGGCAAAGCGCGCAATGCGAATGGGGATGTTTGCTGAAAGGTACACAAGCCTGGCATCTCTGCCTCTCCATGGTTCGGCTTTTCGGTCCCTTGGACTCCAAGCTCATTCTGCAATGCACCAAGGACAAGTGCATTCACTCAGGGCAGCTCCTGACATGAGAGCTGCAGCAAAATTCAGTAACGACTGTTTTAGGACACCAAACTTTGTGGAGGATGACGATGTTGGTCTCTTTTGGCCTGGAAGTTTCAGACAGATTGATAAAAGGGTTGGTGTTAATTTGAGGCATGGTGAGTATGCTAATAATTCAAACACCCCCCCAGCTCAAACATCTGCACCTCCTGATCTCACTCTCAGGCTT 1374 0.401 MHFQALCCFKLHFLTFFGVCFCFSCVVEAHSTLQVNNFCCLFEEFVLTYSLLKRMNNKISICVLLFEVVQFFFNYLFELNALRRLGLLIHINMMAPNLNAEPDDELEVLSQVGSDKSLQETWHDDLNKDCSTTSSCLTKAVSLDLTLNLNANDEELKGASDAASCELGGETHGSASAIPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFAERYTSLASLPLHGSAFRSLGLQAHSAMHQGQVHSLRAAPDMRAAAKFSNDCFRTPNFVEDDDVGLFWPGSFRQIDKRVGVNLRHGEYANNSNTPPAQTSAPPDLTLRL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03524 329 MobiDBLite consensus disorder prediction 306 329 - -
Pste1g03524 329 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 114 253 IPR044246 GO:0009788
Pste1g03524 329 ProSitePatterns Zinc finger C2H2 type domain signature. 184 204 IPR013087 -
Pste1g03524 329 Gene3D Classic Zinc Finger 171 228 - -
Pste1g03524 329 SUPERFAMILY beta-beta-alpha zinc fingers 180 210 IPR036236 -
Pste1g03524 329 MobiDBLite consensus disorder prediction 306 321 - -
Pste1g03524 329 FunFam Zinc finger protein 2 163 228 - -
Pste1g03524 329 ProSiteProfiles Zinc finger C2H2 type domain profile. 182 209 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03524 Pste-Chr1 16590944 16596438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03524 180 329 C2H2 Transcription Factor Family AT1G66140 46.961 4.45e-37 132