Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03517 TCAAACTGAGAATCAGAGAAGCAATTGGAAGATGCTAAGAAAGATGGATGAAGGAGAAATCATCTCAAATGCTTTCCCTCAGAACGTAACCACTTATGCTACATCTAATAATAACAATCCTCCACCTGTTTTGAAGAGGAAGAGAAACCTCCCAGGAAACCCAGGCATGCTTGTTTCTTTCACCTTAGCTTCTCTATTTTCACTTCATCAATATCTCTTATATAAATTTTATTATGGGAATCTTTGTATTTGCACAGATCCTGAAGCAGAAGTCATAGCCTTATCACCAAAGACCCTGATGGCTACCAATAGATTCTTGGATCAAAATCTTCAACTGCATCGACGTGGACACAACCTTCCATGGAAGCTTAAGCAGAGAGCGGGGAAGGAAGCAAGGAAGAGGGTTTATGTGTGTCCTGAGAAGAGTTGTGTCCACCATGATCCTTCAAGGGCTCTCGGAGACTTAACAGGGATAAAGAAGCACTTTTGCAGAAAGCACGGTGAAAAGAAATGGAAGTGCGAGAAGTGCTCAAAGCGTTATGCTGTTCAGTCTGATTGGAAAGCACACTCTAAAACTTGTGGAACTAGAGAATACAAATGTGACTGTGGAACCATCTTTTCAAGGAGAGATAGCTTCATCACTCACAGGGCCTTTTGTGATGCCTTGGCAGAAGAAACAGCTAGAATAAATGCAGCATCAGACATGAACACCTCATTAGGGGGTAGCATTGGTTACAGTACCATAATGGGAACATCCCTAGGCCCAAACATGGCAACACATTTTCCCTCAATTTTCAAGCCAGTTTCAAGTACTGAGGAAACAAGTAACCAAGCATCTAGGGGACTGTCCATTTGGATGGGTCAAACATCTTCTCAGGGTCAAGAAACCATGGTCAACACAAATTTGCGTGAGATTCATCAACTTGGGCCTGACACAAGTTCAGCAACAACATATGGTGGGAACTCAATTCTCCAATGTTCAAATCTTCCGTCTTCTAATAACTATCAGCAAAGTTGGGTGTTTGGAACTAAAATTTCCAACACTAACAACCAAGAGCTAACAAGCAGCACTACTTCACTTCCTTTAGAAAACACAAGTGTTCCATCTTTGTATAGTTCCCAACACCAACTCCACCAAACATCTTCATCAGTTAACATGTCAGCAACAGCGTTGCTGCAAAAAGCTGCTCAAATTGGAGCAACTTCAAGTGACCCTTCATGGCTTGGAAGCTTAGGTTTAAAATGTGGTAATAGCCAAGGTCAAGATGGGAATAATAATAAGTTCAGTGGCATGTATGGTTCAGGTTTGATGCTTACCACTCTTGAGAGTGAAGCAGATAACTCTGCTTGTGACTTGTCACAAATGCACCCTCACAAACGTAGACACTTACTCATTGAAGAAAGTGGAGGAGGGCAAACTAGGGATTTTCTTGGTGTTGGTGTGCAAAACCATTTGCCACACTTCATCAATCAACGGGTGGATTTGATTTGAAGATGTGTATATTAATTCAATGAAAAATGATTTTTTCCACACTCCTTTCAGAAATGTACACTTTGCAAAAGGAAGCAAAGGGAGTAATAATGTGATGAAGAAAAGGAAAAAGAAAAAAGAGATGGTGA 1620 0.4099 MLRKMDEGEIISNAFPQNVTTYATSNNNNPPPVLKRKRNLPGNPGMLVSFTLASLFSLHQYLLYKFYYGNLCICTDPEAEVIALSPKTLMATNRFLDQNLQLHRRGHNLPWKLKQRAGKEARKRVYVCPEKSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARINAASDMNTSLGGSIGYSTIMGTSLGPNMATHFPSIFKPVSSTEETSNQASRGLSIWMGQTSSQGQETMVNTNLREIHQLGPDTSSATTYGGNSILQCSNLPSSNNYQQSWVFGTKISNTNNQELTSSTTSLPLENTSVPSLYSSQHQLHQTSSSVNMSATALLQKAAQIGATSSDPSWLGSLGLKCGNSQGQDGNNNKFSGMYGSGLMLTTLESEADNSACDLSQMHPHKRRHLLIEESGGGQTRDFLGVGVQNHLPHFINQRVDLI 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03517 486 FunFam protein indeterminate-domain 5, chloroplastic-like 139 218 - -
Pste1g03517 486 Gene3D Classic Zinc Finger 139 218 - -
Pste1g03517 486 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 26 471 IPR031140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03517 Pste-Chr1 16507077 16509568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03517 31 472 IDZ Gene Family AT1G03840 45.000 5.80e-121 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste1g03517 None None None