Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03514 GCACAGGTTATTGTGGTGAAGGACTGCAATATTCACTACTCATGCAAAAGTGACTGAGAATTTAATTCCTTCCCACTACTTCTTAACAAGTAGTGGCATGTGGGGAGAAAGAGCAAGCTTTAGAAGAGACAAGTTTCCCTTTTATTAATTATTACTACTTTAAATCCCTCTCTTAACTCAAACGTTTCTCTCTCTCTCTGTTGTCCACCACGGTCTCAATCTCTCTTAGTTTGTGTTGATCCATTTTCTTTATAGCAGCAGAAGGGGAAACCATTTAGGAAAATAGGGTCTCCATAATTGGAATGAGTGAGGAAGAGAAGAAGAAAACAAGGAAATGACTCAGTGCAGTGACCCTTCAGAAAACAATCATCATAACATCATAGTAGAGGGACGAAAAGATAGCTTAATTAGAACTTGTCCTACGTGTGGCCACCATATCAAATGCCAAGATCAGGGTGGTGGAATTAATGACTTACCTGGATTGCCTGCTGGAGTGAAGTTTGATCCAACAGATCAAGAGATTCTTGAACATTTAGAGGCGAAGGTGCGATCTGATATTCATAAGCTTCATCCACTAATTGATGAGTTCATTCCTACACTTGAAGGCGAGAATGGAATCTGCTATACTCATCCAGAGAAGTTACCAGGAGTTAGCAAAGATGGCCTGATCCGCCATTTTTTTCACAGACCCTCCAAGGCATACACAACAGGAACAAGGAAGCGGAGAAAGGTGCATTCAGATGAAGATGGAAGTGAGACACGTTGGCACAAAACAGGTAAAACTAGACCAGTCTACAACAGTGCCAAGTTGAAAGGGTACAAGAAAATCCTTGTGCTTTACACAAACTATGGAAAGCAAAGAAAGCCAGAGAAAACAAACTGGGTCATGCACCAATATCACCTTGGTAGTGATGAAGAGGAAAAAGAAGGGGAGTTAGTGGTGTCCAAAGTCTTCTACCAAACACAGCCTAGACAATGTGGTTCCCTTATGAAAGACTCAACAGTTCCTGGGAAGCATATCAAGGGTCAAAATGTGCATGAGGTGATGAATAGCAAAAGTAATAATAATGGGTATGTCGAGTACTACCATTCAAGTTTCATATCATTTGATCAAGGAGGGCAACATAGACCTACCACTGGTCAAGTAATTTCCCATTTTCCTGTCCATGAAGGTGCTCCTTTTATTCCTTGAATGAAGTACTGGTGGAGAATTATAAGATGAAAGGTAAGAGGTCATGAAGGGTTATGGAGAAAATATATTAATATATAAATATATAGAATTCATGAAATTGAGGTATTACATTT 1305 0.3977 MTQCSDPSENNHHNIIVEGRKDSLIRTCPTCGHHIKCQDQGGGINDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSDEDGSETRWHKTGKTRPVYNSAKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKEGELVVSKVFYQTQPRQCGSLMKDSTVPGKHIKGQNVHEVMNSKSNNNGYVEYYHSSFISFDQGGQHRPTTGQVISHFPVHEGAPFIP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03514 285 Pfam No apical meristem (NAM) protein 51 190 IPR003441 GO:0003677|GO:0006355
Pste1g03514 285 SUPERFAMILY NAC domain 46 209 IPR036093 GO:0003677|GO:0006355
Pste1g03514 285 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 23 230 IPR044799 GO:0003700
Pste1g03514 285 MobiDBLite consensus disorder prediction 129 147 - -
Pste1g03514 285 Gene3D NAC domain 59 213 IPR036093 GO:0003677|GO:0006355
Pste1g03514 285 ProSiteProfiles NAC domain profile. 50 209 IPR003441 GO:0003677|GO:0006355
Pste1g03514 285 MobiDBLite consensus disorder prediction 124 147 - -
Pste1g03514 285 FunFam NAC domain-containing protein 73 59 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03514 Pste-Chr1 16474892 16477001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03514 1 285 NAC Transcription Factor Family AT4G28500 59.365 1.11e-117 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste1g03514 NAM 1.7e-22 No_clan