Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03513 GAAGCAAACAAACAAATCACTCTCATCAGGGGGAGATACTGCAATGGCTGCAGGTTCAGAATCAATGGCGTGGAAGGCCCATGTGGGCATGGCACTGTCACAGCTATTCTATGGTTGCTACCACGTAATCACCAAAGTGGCCCTTAATGTTGGGGTCAACCAACTTGTTTTCTGCTTCTACCTGGATTTCCTTGCCCTCACTATTCTTGCTCCCTCGCTTTTTTCACGGACTAGACTGTCCATTACCAAGAAGCTACTGATGTCATTCTTCTTTCTTGGATTGACTGGGGTATTTGGCAACCAACTTTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCTGTACAGCCAGCTATTCCAGTCTTTACATTTCTGTTTACAGTGATGATGGGCATAGAAACAGTGAACTTGCGAAGCTATCAAGGTCTGGCAAAGATTGGAGGAACTGTTATCTGTGTTTCTGGTGCCATATTGATGGTTTTCTATCGTGGTCCAGCAGTGATAGGAGGCAAAGAAATAGAGCAGGTTGCACAAATTAAAATAAGTGCCAGAGGTCGGCCAGAGCCTTCTGCATGGTTAATCAATGCTAGGATTATATTCTTGATAGAAACTCATGCACCATTATTGAAAAAGTATCCTGCAAACCTATCTGTCACGGCGTATTCATTCTTCTTTGGAGTTGCACTGATGGTGATTGCATCACAAGTCATGGTTAATGAGTTAAAAGATTGGATTTTGACACAGTCAGAAATACTAGCCGTTGGAACTATTGCATCTGCCCTTAACTATGGAATCGTTACATGGAGCAATAAGATTTTGGGGCCAGCTTTGGTTGCCCTTTACAATCCACTTCAACCTGCCTTTTCTGCTTTCCTGTCCCAAATTTTCCTTGGCACTCCAATTGACTTGGGAAGTATACTAGGGGGATCTTTAATCGTTGCCGGTCTATACATAGTTACTTGGGCATCTTATAGAGAAAGACAGGAGGTGGGTGGCTTTGAACTAAGCATAAGTTTGAACGGGTGTTTTGAGGGTGTGGAGTGCAATGGCAGCAGTGGCAGTGGCAGTGGCGGTGGGGGTGACATATGGAAGGCTCATGTGGGCATGGCGCTTGTGCAGCTATTCAATGGCGGCTACCATGTCGTCACCAAAGTTGCCCTTAATGTTGGCATCAACCAATTGGTCTTCTGTGTCTTCCGCGATCTACTTGCCCTTTCCATTCTCGCACCCCTTGCTTATATCCGTGAAAAACGGATTCGACCACCCATTACAAAGAGTCTTCTGATGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTATTTGGTTTAAGCTATACTAATCCAACTTATGCAGCTGCCATACAGCCGTCCATTCCAGTCTTTACCTTTCTGTTGGCTGTAATGATGGGTACAGAAAGAGTGAACTTACTCAGATATGATGGTCTGGCAAAAATTGGAGGAACTATTATCTGTGTATCTGGTGCAATACTTATGGTTTTGTATCGTGGTCCAGCTTTGATAGGATATGCTGAAATTGAGCATGCTACACAAAATGAAATAAGTGCCAGAGGTCAGCCAGAGCCATCTGGATGGTTATTTGGTGGTTTACAGGACTTTGGGTTAGACCATTTTCATCTTGGAGTTCTGTGCTTGATAGGGAACTGCATTTGCATGGCTGCATTTCTAGCCCTTCAGGCACCAGTACTAAAAAAATATCCTGCAAACCTATCAGTTACCGCATGTTCATACTTCTTTGGAGCTTTACTGATGGTGACAGTGTCATTATTCATGACTAGTGACTCAACTGACTGGAATTTGAGGTCATCAGAAATACTTGCTGTTGTTTACGCTGGAACTATTGCATCTGCCCTTAACTATGGACTCATTACATGGTGCAACAAGATCTTGGGGCCAGCCTTGGTTGCCCTATACAATCCGCTTCAGCCTGCGTTTTCTGCTATCCTGTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGTATCATAGGGGGATCTTTTATCATTGCCGGTCTATATATTGTTACTTGGGCATCTTATAGAGAAAGACAAGCAACTGTTGGAGTTACTCCTCAGGGCTCTTGGGTCTCTGAACCACTAATTCATGAGAGAAATGCACACCAGAGAGGTCACATTTTTTCGGTGTCCTCTAGCGTATCCCCAAAGTCATCATCAGATTGAGGAAATCAGCTATTAAATATTTAAATGCCCATCAGTTGTAAAAATTGGTCTCGTGATTCTCAAATCAGTTTCTGCTATAATTGTAATAGGTAAGTATGCATTTGACCATGTCAATGTATCAGGACAAATTGTCAATGCTGTCGTGTTATATCTGAATTTTGAAATGCAAAGTATTATTATTATATCTGAATTTGGA 2432 0.4243 MAAGSESMAWKAHVGMALSQLFYGCYHVITKVALNVGVNQLVFCFYLDFLALTILAPSLFSRTRLSITKKLLMSFFFLGLTGVFGNQLLFLIGLSYTNPTYAAAVQPAIPVFTFLFTVMMGIETVNLRSYQGLAKIGGTVICVSGAILMVFYRGPAVIGGKEIEQVAQIKISARGRPEPSAWLINARIIFLIETHAPLLKKYPANLSVTAYSFFFGVALMVIASQVMVNELKDWILTQSEILAVGTIASALNYGIVTWSNKILGPALVALYNPLQPAFSAFLSQIFLGTPIDLGSILGGSLIVAGLYIVTWASYRERQEVGGFELSISLNGCFEGVECNGSSGSGSGGGGDIWKAHVGMALVQLFNGGYHVVTKVALNVGINQLVFCVFRDLLALSILAPLAYIREKRIRPPITKSLLMSFFFLGLTGIFGNQLLFLFGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLRYDGLAKIGGTIICVSGAILMVLYRGPALIGYAEIEHATQNEISARGQPEPSGWLFGGLQDFGLDHFHLGVLCLIGNCICMAAFLALQAPVLKKYPANLSVTACSYFFGALLMVTVSLFMTSDSTDWNLRSSEILAVVYAGTIASALNYGLITWCNKILGPALVALYNPLQPAFSAILSQIFLGSPIYLGSIIGGSFIIAGLYIVTWASYRERQATVGVTPQGSWVSEPLIHERNAHQRGHIFSVSSSVSPKSSSD 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03513 730 SUPERFAMILY Multidrug resistance efflux transporter EmrE 390 497 - -
Pste1g03513 730 SUPERFAMILY Multidrug resistance efflux transporter EmrE 581 685 - -
Pste1g03513 730 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 315 - -
Pste1g03513 730 PANTHER WAT1-RELATED PROTEIN 357 687 IPR030184 GO:0016020|GO:0022857
Pste1g03513 730 Pfam EamA-like transporter family 201 310 IPR000620 GO:0016020
Pste1g03513 730 Pfam EamA-like transporter family 14 141 IPR000620 GO:0016020
Pste1g03513 730 Pfam EamA-like transporter family 358 495 IPR000620 GO:0016020
Pste1g03513 730 Pfam EamA-like transporter family 543 680 IPR000620 GO:0016020
Pste1g03513 730 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03513 Pste-Chr1 16456794 16475275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03513 439 712 Nodulin-like Gene Family AT5G45370 62.590 6.80e-119 356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03513 1 16456794 16475275 Pste7g00607 7 5666440 5683330 PCT