Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03512 GCAAGAGAGAAATCAGTAACAGTAGGGCAACAAGGATCGTGAACAGAAACACTTTTCAGAAAAGTGTCGTCTATTCAAACCGTTACCGTTATCATCCAGATTCGTTGATGAACCCAATACAATACATGCAGGAAAAAAAAAAAACGTGAAATCTAGCATGGATTGTAGAACTCTCGTGCTGGCAAGCCTTAGCATGTTCAATTCAGCATCGTAGAGACGAAAATTCAACCTCCAATGAGAGATAGAGTGACACAGTGGAACCCACCTTGTTGGTCTTCTTCACTCTGCTCTCGTGTTTTGTTTTCCCAAACAATTTTTAAACGGCCAAACCGACCAATCTTTCTATCTTCCGCAGGATGTTGGTGTTTCTTCTGTTCTACATTTTCTCTCTCTCTCCCCCCTCTCTCTCTTTGACCCAAGACGGTCTTTTTCTCTTGGAAGCCCGCCGGCAACTCTCCGACCCGGAAAACTCCCTCTCCTCCTGGAACTCCGCCTCTGCCAACCCATGCCGGTGGCGCGGCGTGACGTGCCACCCCATTACTGCCGACGTCACCGCCGTGGACCTCGCATACTTCTCCCTCTCGGGCCCCATCCCCACCGTCCTCTGCCGCCTCTCCTCCCTCACCTCCCTCAACCTCTCCAACAACTTCATCAACTCCACCCTCTCCGCCGTCACCACCTGCCGCAACCTCCGAATCCTCGACCTCTCCGAAAATGAACTTGTGGGCCCCATCCCGGACTCCATCGCCGGAATGGCAACGCTCCGCTACCTCGACCTCTCCAGCAACAACCTCTCCGGAGAGATTCCGGCGAGCGTCGGCGCACTCCCCCACCTCGAAAGCCTCAATCTTGTGTCAAACCTCTTCACCGGAACGATCCCCTCTTCACTGGGCAACCTCACTTCGGTTGAACACCTTCTCCTCGCTTATAACCCGTTCTCGCCGGGTCAAATCCCGAGTCAACTCGGTAACCTTAGTAACCTCAAAACATTGTTCCTCGCTCAGTGTAACCTTGTGGGCCCCATTCCTGACTCCCTGGGTAAGCTCTCTCAGTTAACTGCCCTTGATTTGTCGCAGAACAGAATCTCCGGTCACATTCCGCAGTCGTTCACGCGCTTGAAGAGCGTGAACAAAATTGAACTCTACGAAAACTCTCTCTCTGGGGAGTTACCCAGAGGAATGTCCAACATGACCAGCTTGAGATTGTTCGACGCTTCCTCCAACGAGTTGACTGGGACCATTCCCACCGAGTTATGCCAGTTGCCACTCGCGTCGTTGAATTTGTATGAGAACAACCTCGAAGGGTTTTTGCCTCAGATTATTGCACGTTCTCCCAACCTCTACGAGCTCAAATTGTTCAGTAATAAACTTATGGGAACGTTGCCCAGTGATTTGGGGATTCACTCGCCGTTGAACCATATCGACGTTTCGTTTAACAGATTTTCCGGCGTGATTCCGGCGACCCTCTGCCGGTGGGGGGACTTTGAGGAGCTGATTTTGATATACAACTCGTTTTCCGGGGAAATTCCGGAGAGTCTCGGTAATTGCAAGAGTTTAAAGAGGATTCGGTTAAGGAACAATAACCTATCTGGAATTGTTCCCGAGGGGGTGTGGGGTTTGCCCCATTTGTATTTGCTTGAGCTTTTGGATAATTCTCTTTCTGGGCACATTTCTAAGGCCATTTCTGGCGCGCACAACTTGTCAAATTTGTTGCTTTCGAATAACAAGTTTTCCGGGTCGATTCCTGAGGAAATTGGGTTGTTGGATAATCTTGTGCATTTTGCTGCGAGTAATAATAATCTTTCAGGTCGGATTCCAGAGAGTATGGTGAAGTTGAGCCAGTTGGGTAATATTGATCTTAGTTACAATCAACTTTCTGGTGAACTTAATTTTAGTGGAATTAGTGAATTGAGTAAGGTCACTTGCCTTAATTTGTCACATAATTGCCTTCATGGCAGTGTTCCAAGTGAATTAGGAAAGTTGCTTGTGCTTAATACTCTTGATCTTTCTTGGAACACTTTTTCTGGGGAGATTCCAAAGCAGTTGCAGAATTTGAAGCTCTCTGAGCTGAATTTGTCTTACAACCAGCTTTCTGGGGACATTCCTCCTCTTTATGCCAACGACAAGTATAAGCTTAGTTTTATAGGGAATCCTGGTCTTTGTGGTAATCTCGCTGGGCTTGGTGATTCTCATGGTAGGAAGAAGAGTAGGAGGTATATGTGGATTTTGTGGTCCATATTTGCGCTTGCTGGAGTTGTGTTCATTGTTGGGGTGTCCTGGTTTTACATTAGGTACATGAAGATGAAGAGATTGAAGAAGAGGATCAGAACTTCGAGGTGGAGGTCGTTTCATAAGTTGGGGTTTAGTGAGTTCGAGATTGCTAAGTTGCTGAATGAGGACAATGTGATAGGAACTGGAGCTTCTGGTAAGGTGTACAAGGTGGTGCTCAGCACTGGTGAGGTGGTGGCAGTGAAGAAATTTTATGGAGCACCTGTGCATGTAGATGAAATTGTTGGCCATAGAATCGATGAATTTGAAGCTGAAGTTGAAACGCTGGGGAGGATTAGGCACAAGAATATTGTGAGGTTGTTGTGTTGTTACAACAGTGGTGATCACAGACTACTGGTTTATGAGTACATGCCAAATGGCAGCTTGGCTGATTTGTTAAAGAGTAGCAATAACAGGAGCCTCTTGGATTGGCCCACTAGGTATAAAATTGCTGTTGATGCTGCTGAGGGGCTTTCTTATTTGCATCATGATTGTGCCCCACCTGTTATTCACAGGGATGTGAAATCTAACAACATATTGGTGGATGAGCAATTTGTGGCAAAAGTTGCAGATTTTGGAGTTGCCAAAATGATTACAGGATCGAGACAAGGGACACGAACAATGTCTGTGATTGCAGGATCTTATGGCTACATTGCACCAGAGTATGCGTACACTCTTCGGGTGAATGAAAAGTGTGATATATATAGCTTTGGTGTGGTGATTTTGGAGTTGGTAACAGGAAGACCTCCTATTGATCCAGAGTATGGTGAAAATGATCTGGTAAAGTGGGTATCCTCCACATTGGACAATGGAGGACTGGATCATGTGATTGATCCTACATTGGGCTCTAAATACAGAGAAGAAATCATAAAGCTATTGAGCGTGGGGCTTCATTGTACCAGTTCCCTTCCATTAAATCGCCCTACAATGAGAAATGTGGTTAAAATGCTTCACGAGGTAACAACAGGTCCCAAATGTAGAAGTGTAAATGACAGCAAAGTCCCTTGTTCTTATGAAGGTTCGTCTCATAGTATTTAGTGAAATGTATAGTTTGAGCAACAATGTGCTCAAAATTATACCCTTAGCTTTCCATGTTGCATTGAAATATTGAAGCTCATCTTTTAGTCTAGGACCGCTTCTGTATCAAACAACAATTGTAAGAAATCCTTCACGAAGCAAAGAATGCGTTATATACATATGCATTAACATGCTAATATCATTCAGTC 3493 0.4563 MLVFLLFYIFSLSPPSLSLTQDGLFLLEARRQLSDPENSLSSWNSASANPCRWRGVTCHPITADVTAVDLAYFSLSGPIPTVLCRLSSLTSLNLSNNFINSTLSAVTTCRNLRILDLSENELVGPIPDSIAGMATLRYLDLSSNNLSGEIPASVGALPHLESLNLVSNLFTGTIPSSLGNLTSVEHLLLAYNPFSPGQIPSQLGNLSNLKTLFLAQCNLVGPIPDSLGKLSQLTALDLSQNRISGHIPQSFTRLKSVNKIELYENSLSGELPRGMSNMTSLRLFDASSNELTGTIPTELCQLPLASLNLYENNLEGFLPQIIARSPNLYELKLFSNKLMGTLPSDLGIHSPLNHIDVSFNRFSGVIPATLCRWGDFEELILIYNSFSGEIPESLGNCKSLKRIRLRNNNLSGIVPEGVWGLPHLYLLELLDNSLSGHISKAISGAHNLSNLLLSNNKFSGSIPEEIGLLDNLVHFAASNNNLSGRIPESMVKLSQLGNIDLSYNQLSGELNFSGISELSKVTCLNLSHNCLHGSVPSELGKLLVLNTLDLSWNTFSGEIPKQLQNLKLSELNLSYNQLSGDIPPLYANDKYKLSFIGNPGLCGNLAGLGDSHGRKKSRRYMWILWSIFALAGVVFIVGVSWFYIRYMKMKRLKKRIRTSRWRSFHKLGFSEFEIAKLLNEDNVIGTGASGKVYKVVLSTGEVVAVKKFYGAPVHVDEIVGHRIDEFEAEVETLGRIRHKNIVRLLCCYNSGDHRLLVYEYMPNGSLADLLKSSNNRSLLDWPTRYKIAVDAAEGLSYLHHDCAPPVIHRDVKSNNILVDEQFVAKVADFGVAKMITGSRQGTRTMSVIAGSYGYIAPEYAYTLRVNEKCDIYSFGVVILELVTGRPPIDPEYGENDLVKWVSSTLDNGGLDHVIDPTLGSKYREEIIKLLSVGLHCTSSLPLNRPTMRNVVKMLHEVTTGPKCRSVNDSKVPCSYEGSSHSI 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03512 982 Pfam Leucine rich repeat N-terminal domain 21 58 IPR013210 -
Pste1g03512 982 PRINTS Leucine-rich repeat signature 136 149 - -
Pste1g03512 982 PRINTS Leucine-rich repeat signature 230 243 - -
Pste1g03512 982 SUPERFAMILY L domain-like 306 580 - -
Pste1g03512 982 ProSiteProfiles Protein kinase domain profile. 678 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03512 982 Pfam Leucine Rich repeat 564 581 IPR001611 GO:0005515
Pste1g03512 982 Pfam Protein kinase domain 680 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03512 982 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 19 181 - -
Pste1g03512 982 Pfam Leucine rich repeat 88 146 IPR001611 GO:0005515
Pste1g03512 982 Pfam Leucine rich repeat 232 291 IPR001611 GO:0005515
Pste1g03512 982 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 305 412 - -
Pste1g03512 982 SMART LRR_typ_2 518 542 IPR003591 -
Pste1g03512 982 SMART LRR_typ_2 181 206 IPR003591 -
Pste1g03512 982 SMART LRR_typ_2 278 302 IPR003591 -
Pste1g03512 982 SMART LRR_typ_2 230 254 IPR003591 -
Pste1g03512 982 SMART LRR_typ_2 86 111 IPR003591 -
Pste1g03512 982 SMART LRR_typ_2 133 157 IPR003591 -
Pste1g03512 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Pste1g03512 982 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 205 298 - -
Pste1g03512 982 ProSitePatterns Protein kinases ATP-binding region signature. 684 707 IPR017441 GO:0005524
Pste1g03512 982 Gene3D Phosphorylase Kinase; domain 1 661 760 - -
Pste1g03512 982 FunFam Receptor-like protein kinase HSL1 303 611 - -
Pste1g03512 982 Gene3D Ribonuclease Inhibitor 305 607 IPR032675 -
Pste1g03512 982 Gene3D Ribonuclease Inhibitor 178 304 IPR032675 -
Pste1g03512 982 SUPERFAMILY L domain-like 35 370 - -
Pste1g03512 982 SUPERFAMILY Protein kinase-like (PK-like) 678 954 IPR011009 -
Pste1g03512 982 ProSiteProfiles Leucine-rich repeat profile. 567 589 IPR001611 GO:0005515
Pste1g03512 982 Gene3D Transferase(Phosphotransferase) domain 1 761 971 - -
Pste1g03512 982 Gene3D Ribonuclease Inhibitor 20 177 IPR032675 -
Pste1g03512 982 SMART serkin_6 678 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03512 982 FunFam MDIS1-interacting receptor like kinase 1 765 971 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03512 Pste-Chr1 16451880 16455510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03512 14 975 Receptor kinase-like Gene Family AT1G28440 58.282 0.0 1103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste1g03512 Pkinase 1e-46 CL0016