Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03507 ATGTTTCTTCATTGGTGCTGCTTTTCATGTCTCTTTGTCTTGGTGGTTTTGAGAGTAGAGGTAGCTAATGCTCAGTTTTATAGAACAGTGGGAAATAAACACTTACCTTACTGGTCAGTAGTGGTGGATTCATCAGGGCATGGAAACTTCTCTACCATTCAATCTGCCATTGATTCAGTCCCTTCTGACAATAGGTATTGGGTTTCCATCAATGTGAAGGCAGGTACCTACAGAGAAAAAGTGAAGATTCCTTATGATAAGCCTTACATCATACTAAAAGGAGAGGGAAAGAGGAGAACTTTTGTTGAGTGGGATGATCATGATACAACTTCACAGAGCCCTACGTTCACTGCCATGGCTGACCATATTATTGTCAAATCCATGAGCTTTAGGAATTCATACAACAATCCAATAAATAGTAGACGGAACGTGCCTGCAGTGGCTGCAATGGTAAGCGGTGACAAATCATACTTTTTCAGAGTGGGGTTCTTTGGTTTACAAGACACTTTATGGGACGATGCAGGAAGACATTACTATAAGCTTTGTACCATTCAAGGTGCTGTTGATTTTATCTTTGGTGCAGGCCAGTCTTTATTTGAGAGGTGTTCCATATCTGTTATTGGTGGTGCACTAGATCCTGGCCTTCCGGGTTTTATTACAGCACAAGGGAGAATAAATTCAGAAGATTCAAATGGGTTTGTTTTCAAAGACTGCCACGTTTTCGGAAATGGTTCAACTTATTTGGGGAGGCCATGGAGAAGTTATGCTAGAGTTTTGTTTTACAAGACCAACATGACCAACGTTGTTCAACCTAGTGGTTGGAATGCATGGGATTACTCTAAAACAGAGGTTGACATAACATTCGCAGAGTATGGCAATTTTGGACCAGGTTCTGACACATCTAAGCGAGCAAGTTGGACTAAGAAGTTGGATTTAAAAACAATTAATTTTATGGCAAGCACCAAGTTCATTGATAATGAAGGATGGATTAAGAACCAACAGTTCTAA 1008 0.4028 MFLHWCCFSCLFVLVVLRVEVANAQFYRTVGNKHLPYWSVVVDSSGHGNFSTIQSAIDSVPSDNRYWVSINVKAGTYREKVKIPYDKPYIILKGEGKRRTFVEWDDHDTTSQSPTFTAMADHIIVKSMSFRNSYNNPINSRRNVPAVAAMVSGDKSYFFRVGFFGLQDTLWDDAGRHYYKLCTIQGAVDFIFGAGQSLFERCSISVIGGALDPGLPGFITAQGRINSEDSNGFVFKDCHVFGNGSTYLGRPWRSYARVLFYKTNMTNVVQPSGWNAWDYSKTEVDITFAEYGNFGPGSDTSKRASWTKKLDLKTINFMASTKFIDNEGWIKNQQF 335
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03507 335 ProSitePatterns Pectinesterase signature 2. 184 193 IPR033131 -
Pste1g03507 335 Gene3D - 38 335 IPR012334 -
Pste1g03507 335 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 39 331 - -
Pste1g03507 335 FunFam Pectinesterase 36 334 - -
Pste1g03507 335 Pfam Pectinesterase 40 325 IPR000070 GO:0030599|GO:0042545
Pste1g03507 335 SUPERFAMILY Pectin lyase-like 39 331 IPR011050 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste1g03507 Pste-Chr1 16429937 16436051 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03507 3 283 Carbohydrate Esterase AT2G19150 42.403 9.63e-75 230