Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03503 TTGAAAGCAAGCAAACCGAAAAGCAACCACACATCACGTACACTCATTATAAAGCCACTGAATCAAACTTACTCGTTTCGTTTCGTTTCGTTTCATTTCATTTCAAAAAGCCTCATCCACGTTGCAGTTCCCCTCTCTCCAATTAATTACAATTTCTTATGGGGATTTTATCTAACATTGTACGATAATACTTAAAAATTCGAAAAAGAGAAAATCCGAAAAACAATTCCATTCCATGGCAGCGATTGGGGAATTCAGTTCCTTTGCTCCTTGTTTCTCTTTTTCTTTCAATATTAATCAACTATCATACATTTTTACAAACACCTTTTCTATTATTTTTATAGCCGTTGTTATTGTTTTTGCTTAATTCTTCTTCTTCATTGTCTTCCGTCATGTCTACTCCAACTGCATTAATTATTGTTTTTGTTCTTGTCTTTGTTGTTCCCCAAATCTAACCGTTCATCTCGATCACACGCTCATTTCAAGAGTGATTCCCGTAGAGAGAGGGAGAGTAGATGAAATGTTAGAGAGAGAAACTCTGAAATTTGAATGCACGCGTCCAGCTACCCCTTTTGCCTCTGATTTTGCTTTTCCTATTCTTTGAGGGTTTTTGGTTTCTGGGTTGTTTCTGTTTGCGGGGTTTGGGGTTCTCTGGAGCACAAGGGTTCGTTGTTCTGTTGGGGATTGTCTAAGTGAGCTTGATATTTTTGTATGGAGGGTGGTTCAGAAGGAGAGAAGTCAGTGGAGGGAGAGAATAAGAGCAAGCGCAAAATGAAGACAGCTTCGCAGTTGGAGCTTCTGGAAAAAGCCTATGCTGTGGAGGCTTACCCTTCGGAGGCTTTGCGGGCTGAGCTATCTGTGAAGCTGAGTTTGTCTGATCGTCAATTGCAGATGTGGTTCTGTCACCGGAGGCTTAAGGACCGAAAGGCAGTGCCGGCCACCAAGAAGCTGCAAAATGATTCATCCCATGCAGGAGTAGGGGAGGGTGTTGAGCAAGTAGCAGGGGCTGATGTTGGGCGTTATTATGGTCTGCCTTCTGGTCCATTGTGTCATCAGGATTCTCAGCGAATTGTGCCTCTGCCTGGGATGATGACATTTCCTAGGATGGGAGCTGGATTGCCAGCAGTTGAGAGCAGCAGTTACTTTGAACCTCCACAGACCATGGAGGTGCTACGAGCAATTGCATTTGTGGAAAGACAGTTGGGGAAGCTGATAAGAGAAGATGGACCCATCCTGGGGATGGAATTTGATTCTTTGCCACCGGGTGCATTTGGTGCACCCATAGGGGCAGTGACAATGGGGCAACAAAGGCAATGCGGAAGGCCTTTTGAGGCAAAAATTTGTGAACAACTAGACAAGGGTGTTTCAAGGACTCTGCATGAGTATCAATTTATTCCTGAGAAGCCATCTGTTAGAAATGAGACATATGAGAGAGTTGCCCCCGCTATCTGCTATAGTTCTCTTGATGGATTTCCACATTCTAGGACTTCATTATCTAGTGGACAGTCTTTCCTCAATGGGAATGAATCTGCATCTTATGGATATGGAATTCTGGATCAGATACCTGGTCTAAATTTTTTGTCTCAGCACGGAAGGCTGAGTCATCTTTTGCCATCTGCTTCAGGAGAGAATGGTTTTCCACGAAAGGACCAATATCTTGATGTAGCTGCCAACATGCATAATGGGGCTCACCCTATAACTCTGAATTACAGCCCACTAGTGCCATCTGAAGGAAGGGTTATGCACGCCGAAGACTTATCAAGGTTTAAAAGGAAGCGAAAGAATGAAGAGGCTAGAATGCAACAGGAACTTGAAGTGCAAGAGAAAAAAATTAGAAAAGAGCTTGAAAAACAAGATATTCTAAGGCAAAAGAGAGAAGAACAAATAAAGAAAGAAATGGAGAAGCATGAACGTGAAAAGCGGAAGGAAGAGGAAAGGCTATTGCGTGAAAGACAGCGAGAGGAGGAGAGGTACCAAAGAGAACTGAGGCGAGAACAGGAGAGGCAAGAGAAACTTCTACAGAAGGAATCAATCAGAGCAGAAAAGTTGAGACATAAGGAAAAACTGCACAGGGAGAAAGAGGCAACAAAGATGAAAGCTGCCAATGAGAGAGCTATTGCTCGCAGAATTGCCAAAGAATCAATGGAACTTATTGAAGATGAACGCCTGGAACTCATGGAGTTAGCTGCATCAGAGAAGGGACTTTCTTCAATACTGGCTCTTGACTATGAAATTATTCAAAATCTTGAATTATATAGAGATGGGCGGCCATCCTTCCCACCCAAGTCTGTACAGTTGAAAAAAATCTTTTCAGTTAAACCTTGGTCAGATTCTGATGAGAATGTGGGAAACCTTCTGATGGTTTGGAGGTTCTTGATTACCTTCGCAGATGTTCTTGGTATATGGTCATTTACCTTGGATGAACTTATACAAGCTTTTCATGACCATGACCCAAGGTTGTTAGGTGAGATTCATATTGCACTTCTGAGATCAATTATAAAAGATATTGAAGATGTTGCAAGAACACCCTCTACTGGGTTAGGATGTAACCAAAACAGTGTGGCAAACTCTGGTGGGGGGCATCCACAGGTAGTTGAAGGGGGTGATGGTAGAGATATAATTTCTAATCTACGCAGTGGAGCAGCTGTTGAAAAAGCTGTTGCTATTATTCAACAGAAAGGATTATCTAATCCAAGAAGATCTAGGCATCTCCTGACACCTGGAACTGTAAAATTTGCTGCATTTCATGTTCTTTCTCTTGAAGGAAGCAAAGGCCTTAATATATTGGAAGTTGCAGACAAGATTCAGAAATCTGGACTTCGTGATCTCACAACAAGCAAAACGCCAGAGGCTTCTATTGCTGCTGCTTTGTCTAGGGATACAAAACTATTTGAAAGGACAGCTCCTTCAACATATCGTGTACATCCTGCTTATAGAAAGGACCCAGCTGATTCTGAAGCAATTTACTCTGCTGCCAGGGAAAGAATCATGATGTTCAGAGGTGGATTTTTGGTTGCAGAAGAAGCTGATGATGGTGAAAAAGATGAAGATTCTGAAAGCAATATGGCAGAAGATCGTGAGACTGACGGTTTAGGAACTGAAACAAATAAAAAAAAGGAGAGTTCCAATTATGAGGAATTTAATGCAATCACTGTCATGAGAAATAGAAAGAATAGGGTCAAGGTTTTGCAAACTCATGATACCTGCCATGAGAAAGTGGGTGACGATTTAACATCAATTGTTATGGAAGAATTCAATAGACATAAAGATATTAGTACCCTTAGTGAAATTGCTGTTTACAGCAATGATGTGGTTAGTCCTAATGTCGAAGGCATAGATTTCGATGAAAGCATGCCAGGTGAACCATGGGTACAGGGGCTTACAGAGGGAGAGTACTCGGATCTTAGTGTAGTGGAGCGTCTTCATGCTCTTGTTGCTTTAATTGCTGTGGTAACTGAAGGAAATTCAATTCGTGTTGTACTTGAGGAGCGTCTAGAAGCAGCAAATGCTTTAAAGAAGCAGATGTGGGCAGATGCTCAGTTTGATAAGCGTCGTATCAAAGAGGATATCTTTGTTAAGAGGCAGTCTATCCCCTATTTCAGCAAAAAGAATGAGCCAGCTGCTGTTTTTCCCTCAGTAGAGTGTAAACAGGGCCCAGTTCTTATTGTCAACAATAAAAATAGCAAGGCTCTGCTCACTTCCCATGACCTGAATGAACAGAGCAATGAACTTGTGGAAAATCATAATCATCTTGAGAGCTCTCCAGTAGAAGTTGATATGCAAATGCCAGATTGTTCTACTGGCCAACAAAATTATTCTTTCCAACAATCAGGATATGCTGTTGAAAAATCAAGGTCAAATTTAAAGTCATACATTGGTCATTTGGCAGAGCAAACTTACATGTACAGGTCATTGCCTCTTGGTCTGGATCGAAGACGTAATCGATACTGGCAGTTCATCACATCTGTTCAAAATGATCCTGGTTGTGGAAGGATTTTTGTGGAGTTGCACAATGGTCAATGGAAGTTGATTGATTCTGAAGAGGGTTTTGATGCTTTATTGGCTTCCTTGGATGTACGTGGGGTCAGGGAGTCCCACTTGCATATGATGTTGCAAAAAATTGAATTGTACTTCAAAGAAACTGTTAGAAGGAGTGTCCAAAATGTTAACAGGAGAATGCAAAATGGAGACACTATTGAGAGACTCAAGACAGAAGCTGTTGAAATGGCTTCAAACCAAGATTGCATTGCTAATATACGTGGTTCTATTTCTGTATGCATTGATAATCTGGATGCATCAGAGACCTCAACATCTTTTGTGGTTCAGCTTGGAAGAAATGAAGCCGAAACCAAAGATGCTTTTGTGAGATACTGTGACTTTGAGAAATGGATGCAAAAGGAATGCCTAAATTCCTCTGTGTTATGTGCAATGAAGTTTGAGAAGAAGAGGTGCTGCCAATTTCTGTCAGTATGTGATATGTGCCTTCATGTTTATTTCTCTGGAGGAGCTCCATGCCCCTCTTGCCATGGAACCTTCGGTGCTTGTAAGAGCAACTCTACTTCTGGACATGTTCATTCTGAAGGCAAAGTGAAGATTGGCATTGATTGTTTTCATGTTTCATCCCTATTGCCTTTAAGGATGAGATTACTCAAAATCTTCTTGTCAATCGTTGAGGTAACCCTTCCCCAAGAAGCTCTGCAATCTCTTTGGAGAGACAACTATAGGAAATCTTGGGGTACAAAGCTGGATGCTTCCTCATCAAGTGAAGACCTTCTTCAGACATTGACTGCATTGGAAGGTGCTATAAAGAGGGAGTATTTGGACTCAAACTATGAAACTACTGGTGAGCTGTTGGGTTTATTTAGTTCCTCTGGATGTCACACTAATAATTCCATTAATGGTGAAAGGATACCTGTACTTCCATGGATTCCATATACATCAGCTGCTGTGGCTCTAAGGCTCTTTCAACTTGACGAATGCATCTGTTACACTTCACAGAAGAAGCTGGAGTCTGAGAAGGATAAGAAAATTGGAATTGTGATGAAGCTTCCATCAAAGGATACTTCTGCCGAAAATTCCTACGATGCTGGAGAAATTGAAACTTCACATCAAACAAAACTTACTGTAGAGAACTGGGTTGGTCTTGGTACTGGTCGCATGAGCTACAGCAGAGGACAAAGGACTCGTGGCCATTCTCATGGTAGAATATCATCATCAAAAGGGAGGGTTCTTAGTTCAAGATCTGGTTCTAAAAAGAGAGGCACTACCTCTAGAAGCAGGACAACGGAAAAATTAATTGGATGGAGAGGGAGAACTCGCGGACAAGAAAGAAATGCCCGTGGTCGTCGGAGCATTAGAAGCAGGAAAAAATCAGCAGCCAATGTGGATGTGCTCCCTGGTGAGAGGACCCCAAATGATGTCTTGGGGGAAGCACCAATCGTCTTTGTTAGAGAGAAGATTGATAAGGGTGAAATGGAAGCAGCCACTACACTAAATGCTAGTAGTTCAGAGAGATCAGGCTGTGAAGATGATACTTACCAAGCAATAGGTGACGAATATGATTATCTGATGGATAATAATGATGGATATCAAGTTGGATTTTGTGGGAAGTCTGAGAAGTTAATAGATGGAAGCCACTATAACGTGGATGGTGAGCAAGATGCGGATATTGATGATGAACAAATTGATCTTGATGTTGAAGATTACATAGTTGGGGATGACTCAGATGCCGCGGTTAATAAAGAAGAAAATGTAGAGCAAAACATGGATATGGATGGAGTTGGTTCTACATCATCAGACTATAGTGAGTAATGTGGCAAGTGACTCCACAAAAGTCTGAAAGTTTTGATATTTTGTTAGTAATGTAGTAGGCATAGGAATTTTCCTGTCACTGTAAATTGTTCAACAATGGGGGCAATTTCACGTGTATGATTAATTAACGCTAGTGTAGGGAGCTTATAGCTAAAGTCATTATGTTGAGATGACATCTCCTTTTAATGTTCCTTAGACTTGTAACATCATGATATATAAGAAGAGATTTTATGTTCCGCTTTTTGAAAGAAAATATCGATCATTTATCGATTATATTA 6089 0.4121 MEGGSEGEKSVEGENKSKRKMKTASQLELLEKAYAVEAYPSEALRAELSVKLSLSDRQLQMWFCHRRLKDRKAVPATKKLQNDSSHAGVGEGVEQVAGADVGRYYGLPSGPLCHQDSQRIVPLPGMMTFPRMGAGLPAVESSSYFEPPQTMEVLRAIAFVERQLGKLIREDGPILGMEFDSLPPGAFGAPIGAVTMGQQRQCGRPFEAKICEQLDKGVSRTLHEYQFIPEKPSVRNETYERVAPAICYSSLDGFPHSRTSLSSGQSFLNGNESASYGYGILDQIPGLNFLSQHGRLSHLLPSASGENGFPRKDQYLDVAANMHNGAHPITLNYSPLVPSEGRVMHAEDLSRFKRKRKNEEARMQQELEVQEKKIRKELEKQDILRQKREEQIKKEMEKHEREKRKEEERLLRERQREEERYQRELRREQERQEKLLQKESIRAEKLRHKEKLHREKEATKMKAANERAIARRIAKESMELIEDERLELMELAASEKGLSSILALDYEIIQNLELYRDGRPSFPPKSVQLKKIFSVKPWSDSDENVGNLLMVWRFLITFADVLGIWSFTLDELIQAFHDHDPRLLGEIHIALLRSIIKDIEDVARTPSTGLGCNQNSVANSGGGHPQVVEGGDGRDIISNLRSGAAVEKAVAIIQQKGLSNPRRSRHLLTPGTVKFAAFHVLSLEGSKGLNILEVADKIQKSGLRDLTTSKTPEASIAAALSRDTKLFERTAPSTYRVHPAYRKDPADSEAIYSAARERIMMFRGGFLVAEEADDGEKDEDSESNMAEDRETDGLGTETNKKKESSNYEEFNAITVMRNRKNRVKVLQTHDTCHEKVGDDLTSIVMEEFNRHKDISTLSEIAVYSNDVVSPNVEGIDFDESMPGEPWVQGLTEGEYSDLSVVERLHALVALIAVVTEGNSIRVVLEERLEAANALKKQMWADAQFDKRRIKEDIFVKRQSIPYFSKKNEPAAVFPSVECKQGPVLIVNNKNSKALLTSHDLNEQSNELVENHNHLESSPVEVDMQMPDCSTGQQNYSFQQSGYAVEKSRSNLKSYIGHLAEQTYMYRSLPLGLDRRRNRYWQFITSVQNDPGCGRIFVELHNGQWKLIDSEEGFDALLASLDVRGVRESHLHMMLQKIELYFKETVRRSVQNVNRRMQNGDTIERLKTEAVEMASNQDCIANIRGSISVCIDNLDASETSTSFVVQLGRNEAETKDAFVRYCDFEKWMQKECLNSSVLCAMKFEKKRCCQFLSVCDMCLHVYFSGGAPCPSCHGTFGACKSNSTSGHVHSEGKVKIGIDCFHVSSLLPLRMRLLKIFLSIVEVTLPQEALQSLWRDNYRKSWGTKLDASSSSEDLLQTLTALEGAIKREYLDSNYETTGELLGLFSSSGCHTNNSINGERIPVLPWIPYTSAAVALRLFQLDECICYTSQKKLESEKDKKIGIVMKLPSKDTSAENSYDAGEIETSHQTKLTVENWVGLGTGRMSYSRGQRTRGHSHGRISSSKGRVLSSRSGSKKRGTTSRSRTTEKLIGWRGRTRGQERNARGRRSIRSRKKSAANVDVLPGERTPNDVLGEAPIVFVREKIDKGEMEAATTLNASSSERSGCEDDTYQAIGDEYDYLMDNNDGYQVGFCGKSEKLIDGSHYNVDGEQDADIDDEQIDLDVEDYIVGDDSDAAVNKEENVEQNMDMDGVGSTSSDYSE 1699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03503 1699 CDD homeodomain 16 72 IPR001356 GO:0003677
Pste1g03503 1699 ProSiteProfiles HARE-type HTH domain profile. 671 740 IPR007759 GO:0006355
Pste1g03503 1699 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 883 925 IPR028942 -
Pste1g03503 1699 MobiDBLite consensus disorder prediction 1670 1684 - -
Pste1g03503 1699 SMART HOX_1 15 77 IPR001356 GO:0003677
Pste1g03503 1699 MobiDBLite consensus disorder prediction 1501 1515 - -
Pste1g03503 1699 MobiDBLite consensus disorder prediction 772 805 - -
Pste1g03503 1699 MobiDBLite consensus disorder prediction 1519 1544 - -
Pste1g03503 1699 Pfam DDT domain 543 598 IPR018501 -
Pste1g03503 1699 ProSiteProfiles 'Homeobox' domain profile. 13 73 IPR001356 GO:0003677
Pste1g03503 1699 Pfam Homeodomain 16 72 IPR001356 GO:0003677
Pste1g03503 1699 MobiDBLite consensus disorder prediction 782 805 - -
Pste1g03503 1699 SMART testlast3 542 601 IPR018501 -
Pste1g03503 1699 MobiDBLite consensus disorder prediction 1483 1561 - -
Pste1g03503 1699 Coils Coil 349 438 - -
Pste1g03503 1699 ProSiteProfiles DDT domain profile. 542 601 IPR018501 -
Pste1g03503 1699 Pfam HB1, ASXL, restriction endonuclease HTH domain 671 737 IPR007759 GO:0006355
Pste1g03503 1699 MobiDBLite consensus disorder prediction 1 23 - -
Pste1g03503 1699 MobiDBLite consensus disorder prediction 1669 1699 - -
Pste1g03503 1699 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 5 630 IPR044977 GO:0006357
Pste1g03503 1699 SUPERFAMILY Homeodomain-like 11 72 IPR009057 -
Pste1g03503 1699 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1066 1137 IPR028941 -
Pste1g03503 1699 Gene3D - 7 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03503 Pste-Chr1 16409358 16426696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03503 1 1439 Homeobox Transcription Factor Family AT5G44180 48.060 0.0 1209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pste1g03503 WSD 5.2e-14 No_clan