Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03498 TTCAGATCACAGAGAAATAGAATCCAGAAATTGACACAACTAATATATGGAAGGCCTTTGGGTTTTGTTGTTGGATTACCCTTGGCTCTTGTTTCTTTGGTTTTTTTACCTGTGGGAGCAAGCTTCTGGATTCTTGGGTCAATATTGAGTTGCGTGTGTCCATGTTGCAAAGGCTTGGCCAATGTGGGTGTGAGTCTTGTAAAGCTTCCAATTCGAATCATAAGTAACAGTAACAGAAGGAGTCTAACAACCGCAAAACTGAAGAGAAAGAGAGCAGAAGAACAACAAATACCTTCACCACCAACCATGGGTGTCGATTACTACAAGATCTTGCAGGTTGATAAGAACGCTAAAGATGACGACTTGAAGAAGGCTTATAGGAAACTTGCTATGAAATGGCACCCCGATAAGAATCCCAACAACAAGAAAGAAGCTGAGGCTAAGTTTAAGCAGATTTCCGAAGCATACGAGGTACTTAGCGATCCTCAAAAAAGAGCTATCTATGATCAATATGGAGAAGAGGGTTTGAAGGGCCAGGTTCCTCCTCCTGACGCTGGTGGTGCTGGAACTACTTTCTTCTCCACAGGAGATATTCCGGGATCGTTTAGGTTCAATCCCAGGAATGCTGATGACATTTTTGCAGAGTTTTTTGGGTTCTCAAGCCCATTTGGTGGAATGGGTGGGAGAGGTGGCAGCGGTGTTGGTGGTGGTGGCGGCGCTGCTGGCATGAGATCAAGGTTCCCTGGTGGCATGTTTGGTGATGACATGTTTGCAACTTTTGGTGATGGAGGAGTACATATGAGTCAAGGTGCACCTCGGAAGGCTCCCCCCATTGAGAACAAATTGCCCTGCACACTTGAGGAGATTTATAGAGGGACTACAAAGAAGATGAAGATATCTAGAGAAATTGCAGATGCCAGTGGCAAAACCATACCAGTGGAAGAGATCTTGACCATTAATGTGAAACCTGGTTGGAAGAAGGGAACAAAGATCACTTTCCCTGAGAAAGGAAATGAGCAGCCAAATGTGACGCCGGCAGACCTTGTATTCATCATTGACGAAAAACCGCATGGTGTCTTCACTCGTGATGGAAATGACCTTGTTGTGACCCAGAAGATTTCCCTTGCAGAGGCCTTAACTGGTTATACAGTGCACCTCACTATGCTGGACGGTAGAACATTAACCATACCAATCAACAATGTTATTCATCCAAATTATGAAGAGGTTGTCCTAAGAGAAGGAATGCCACTTCCAAAAGATCCAACAAAGAAGGGGAACTTGCGGATAAAGTTTAACATCAAGTTCCCAAATAGGCTTACTGATGAGCAAAAATCAGGAATTAGGAAACTCTTGGCTGCATAAGCCTCTGAGATAGTATAGTATTTGCCAGATTTTCCACTGGAAGTGGGCTTTTATGAAGATGTAAGATATACAAATAAATTTGGTGGTTTTTATATATGTACTGTAAGGTAGTGAACAAATTTTGATTTGATTCTTTTGTATCAGTACAGTTAATGTGCAAAGCTTTTAAATCCTCGGATCAACTGTCGGTGGGAATATAAGCTTGAAATTAAATCCTAAGGAAATGCTTTTGGAACTAAGAAACTTTGCTGTATATAGTTTGTTTCTCAAGATTGCACTCAAAACTAT 1650 0.42 FRSQRNRIQKLTQLIYGRPLGFVVGLPLALVSLVFLPVGASFWILGSILSCVCPCCKGLANVGVSLVKLPIRIISNSNRRSLTTAKLKRKRAEEQQIPSPPTMGVDYYKILQVDKNAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDPQKRAIYDQYGEEGLKGQVPPPDAGGAGTTFFSTGDIPGSFRFNPRNADDIFAEFFGFSSPFGGMGGRGGSGVGGGGGAAGMRSRFPGGMFGDDMFATFGDGGVHMSQGAPRKAPPIENKLPCTLEEIYRGTTKKMKISREIADASGKTIPVEEILTINVKPGWKKGTKITFPEKGNEQPNVTPADLVFIIDEKPHGVFTRDGNDLVVTQKISLAEALTGYTVHLTMLDGRTLTIPINNVIHPNYEEVVLREGMPLPKDPTKKGNLRIKFNIKFPNRLTDEQKSGIRKLLAA 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03498 453 SUPERFAMILY Chaperone J-domain 105 202 IPR036869 -
Pste1g03498 453 SUPERFAMILY HSP40/DnaJ peptide-binding domain 277 357 IPR008971 GO:0006457|GO:0051082
Pste1g03498 453 SUPERFAMILY HSP40/DnaJ peptide-binding domain 359 445 IPR008971 GO:0006457|GO:0051082
Pste1g03498 453 CDD DnaJ_C 276 439 - -
Pste1g03498 453 FunFam Dnaj homolog subfamily b member 274 355 - -
Pste1g03498 453 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 103 451 - -
Pste1g03498 453 FunFam DnaJ subfamily B member 13 105 227 - -
Pste1g03498 453 Pfam DnaJ domain 106 169 IPR001623 -
Pste1g03498 453 PRINTS DnaJ domain signature 144 164 IPR001623 -
Pste1g03498 453 PRINTS DnaJ domain signature 126 141 IPR001623 -
Pste1g03498 453 PRINTS DnaJ domain signature 164 183 IPR001623 -
Pste1g03498 453 PRINTS DnaJ domain signature 108 126 IPR001623 -
Pste1g03498 453 Pfam DnaJ C terminal domain 278 436 IPR002939 -
Pste1g03498 453 ProSiteProfiles dnaJ domain profile. 106 172 IPR001623 -
Pste1g03498 453 CDD DnaJ 106 161 IPR001623 -
Pste1g03498 453 SMART dnaj_3 105 164 IPR001623 -
Pste1g03498 453 Gene3D DnaJ domain 105 227 IPR036869 -
Pste1g03498 453 Gene3D - 357 437 - -
Pste1g03498 453 ProSitePatterns Nt-dnaJ domain signature. 149 168 IPR018253 -
Pste1g03498 453 Gene3D - 277 355 - -
Pste1g03498 453 FunFam DnaJ subfamily B member 13 357 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03498 Pste-Chr1 16397032 16407540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03498 107 171 C2H2 Transcription Factor Family AT1G74250 40.580 6.98e-10 59.3