Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03496 CACAAGACTTACAGTAAATGTTAAAAGATACGAATGTGGGTATGTGCATGTATGCATCTCATTGATCTTCCTCAACTCGTAGATTCTGTGTTTTTTCTTTATGCGAACCGTGTTTTTCGAGTGAAGAAGAAGAAAGTAGAAAGTTGTTTGAGTTCCCAAAAAGCCTCGGTGTTTAATAATGCTCTCGTGACTTTCTCTCACTTGCCTTTGTCCATCAGTATAAGCTTCGGTCTCAAACCAAAAACTCTCCTTTCTTTCATTTTGTAACCAACTCCAGTCTTTTTGACTTCACACCAGATCTCCGTCTCTATCTCTTACACAAGACATCACATACACTCTCATCGCTGTTGTAAAGGTTGGGTTTTCCTTTTTGTTTTTGAGTTGGTGAATATGTGGGTGGTGAAGCTGAGTTTTTATCATGCAGTGGAGGAGACTAAAGAGAGGAGCAAATTTAGTTGCTTTGGCTAGTTTCACTTTGTTTTTTGGCAAGAAAAATGACCATTGATGTGCCACCATCCGGCGCTCAAAGTGTGAGGACTAACAGATCTTCCTTTGGTTCTAGCAATAGCTATGATGGCACCCCGATACACAATTGTGCATCTGTTAGCAATGGTGATGGCTATGATAGTGATGGCTCCAATTTTGCTCCACCTACCCCGACAACCCTATCAATGGCTATTCCAGCAGAACTTGCTGAAGCTGTACCTTTGATTGATAGATTCCAGGTGGAAGGATTCTTAAAATTGATGCATAAACAAATTCAATCTGCTGGAAAACGTGGATTTTTTTCTAAAAGATCTGTGGGTCCCCAAGTTAGAGAGAAATTTACAATTCAAGACATGCTTTGTTTCCAAAAGGATCCAATACCTACATCATTGCTTAAGCTGAATGGTGACTTGGCAAGCCGAGCAACAAAATTATTTCAACTAATTTTGAAATATATTGGAGTTGATTCATCTGATCGTGTAACCCCAATAATCATAGAAGAACGAGTTGAGCTTGTTGGAAAATTATACAAGCAATGTTTGAAGCGTTCAGAACTTCGAGATGAACTTTTTGTCCAGATATCAAAACAAACGAGAAACAATCCTGAGAGGGAATACTTGATTAAAGCATGGGAGCTAATGTATATATGTGCTTTGTCCATGCCTCCTAGTAAAGACATTGGAGCATATCTGTCAGAATATGTTCATAATGTGGCACATGGTTTGACTAACATTGATCCTGAGATCCAAGCCCTTGCATTGAATACGTTAAATGCTTTGAAGCACTCTGTCAAGGCTGGTCCTAGACATATAATACCCGGTCCTATGGAGATTGAAGCTCTGTTGACTGGGAAAAAGCTTACAACTATAGTGTTCTTCCTGGATGAAACATTTGAAGAGATTACATATGACATGTCTACAACTGTTGCTGATGCTGTTGAGGAGCTTGCAGGGATCATTAAATTGTCAACATACTCGAGCTTTAGCTTGTTTGAATGTCGTAAAATTGTTACGGGCTCCAAGTCACCTGAATCTGGGAATGGCATGTCTTTTTCTAATTCTTGGCTTGTTAATAAGGAGTACATTGGCTTAGACGATAATAAATATATTGGGGATCTCCTAGCTGAGTTTAAGGCAGTGAAAGATCGAAGTAAGGGAGAAATTTTGCAGTGTAAGCTTATATTCAAGAAAAAGTTATTTCGGGAATCAGATGAAGCTGTGACAGATACGATGTTTTTGCAGTTGTCCTATGTACAATTGCAGCATGATTATATTTTGGGTAATTATCCTATTGGAAGGGACGATGCTGCCCAGCTTTCGGCATTGCAAATCTTGGCTGAGATTGGATTTGTTAGAAGACCTGAATCATGCACTGACTGGAATTCATTTCTGGAGCGATTTCTACCTAGACAAATAGCAATGACTCGAGCAAAACGGGAATGGGAATTGGATATTCTTTCTTGCTATCATTCACTGGCGCATGTGACGAAAGATGATGCAAGACAACAATTTCTGCATATCTTGAGGACACTTCCTTATGGGTTTTCTGTTTTCTTTAATGTTCGCAAAATTGATGATCCAATTGGACTCTTGCCTGGACGAATAATATTGGGAATCAACAAGAGAGGGGTCCATTTTTTCCGTCCTATTCCTAAGGAATATATGCACTCTGCCGAGTTGAGAGACATAATGCAATTTGGAAGCAGCAATACTGCAGTATTTTTTAAAATGCGAGTTGCAGGTGTTCTTCACATATTCCAGTTTGAAACGAAGCAGTTGCTGGAAAAATTGCGTGAGAAGCAAAAACAAGAAGAGGAAATGCTAAAAGAAGTAGAGAGCTTAAAACAATCTTTAAAAGCTGATAAGCAGAGTCTTGCAGAAGTTACAAATGACCGTGACAAGCTTAGGTCATTATGTGATGAAAAAGATAAGGCACTTCAGGCTAAAATTCTAGAGAAAAGAAACATGGAAGCAAAGATGTCCAAGTTGAGTAATCTAGTTACAGAAAATGCTACCAAAAAGGACCCCATTCAAGAAGTGTCACAAAAACTTGAAGATGACCTAAAACTATGTAAAGGTGAGCTACTTGTTGCTGAAGAGACTATCAAAAGCTTGAGAAGTGAAAAGTTGATTTTGGAACGGAAGCTATCTGAGCTTGAGAACAAGAGTGCTGAAGAGATTAGTTCTCTTCAATGTAAACTTGAGCAAGAACGCAAAACTCTGAACTCTCAAGTATATGACCTTGAACGAAAACTGGATATGTGTAGACAAGAATTGACTGTTGCCGAGTCTACACTTTCGGTGAAGGACTCTGAATTGGCTGCATTGAAGAACAATTTAGATGAACTAGAAGAATTGAGAGAAATGAAAGAGGATATTGATAGAAAGAATGAACAAACAGCTGGCATACTGAAGATGCAAGCAGCTCAACTAGCTGAAATGGAATTGCTTTATAAGGAAGAGCAGGTTCTCAGGAAGCGATATTTTAATACCATAGAAGGTGGTGGACTGCATATGAAAGGCAAGATAAGAGTTTATTGTCGGTTAAGACCTCTATGTGAAAAAGAAATTGCAAATAAAGAAAGAGATTCTCTTAATACTGTAGATGAGTTTACGGTTGAGCATCGATGGAAAGATGATAAGCCAAAACAGCACATGTATGACCGTGTGTTTGATGCTGATGCCACTCAAGAAGATGTGTTTGAGGATACAAGGTACTTAGTGCAATCTGCTGTAGATGGTTATAATGTCTGCATATTTGCTTACGGTCAAACTGGCTCTGGAAAGACTTTTACAATCTATGGAGCTGAACACAATCCTGGGCTTACCCCTCGTGCTACTGCAGAACTTTTTAGAATTTTAAGAAGAGATAGTAACAAATATTCTTTTTCTTTGAAGGCATATATGTTGGAATTATATCAAGATACACTTGTGGATCTTCTGTTACCCAAGCATGCAAAGCGTTTAAAATTGGATATTAAGAAGGATTCCAAGGGAATGGTAGCTGTAGAAAACGTAACGATTGTGCCAATTTCTAATGTGGAGGAATTAAACAGCATAATACAGAGGGGATCAGAACTACGACATACATCAGGAACACAAATGAATGAAGAAAGCTCTAGATCTCATCTCATCCTATCAATTGTCATCGAATGTACCAACCTTCAAAGCCAATCAACTGCAAGGGGAAAGTTAAGTTTTGTGGATCTTGCTGGATCAGAAAGAGTAAAAAAGTCAGGTTCTGCAGGTAGTCAACTCAAAGAAGCTCAAAGTATCAACAAATCATTATCAGCACTTGGAGACGTTATTAGTGCTTTGTCTTCTGGTGGTCAACACATACCTTACAGAAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGGGGTAATGCCAAAACTCTTATGTTTGTGAATGTATCTCCAACAGAATCAAGTTTGGATGAGACACATAACTCTCTAATGTATGCATCACGAGTGAGATCAATTGTGAATGATCCAAGCAAAAATGTTTCTTCCAAAGAGATAGCTCGACTGAAGAAATTGGTTGCCTATTGGAAGGAACAAGCAGGTAGGAGAGCAGAGGATGAAGATTTGGAAGAAATCCAAGAAGAAAGACCAACCAAAGATAGGACTGATGGCCGCCATTCTATGTAGTCACTCTTGGCAAATAGGAACTCACCAATAGCATCTAGACAGGATTGGCCATTTACTGCATTTTAAGATTTTGGAATGTTGTGTCATCAGTTCCCACTCAACAAGATTGCACACGCTTGATAGGTTGTAATTTATCTAACAGAATATGTATAGTTGAATCATGTACATATCTTTCTTATCTTTTAACTTGTTCCCATATAACTAGATACATTATGCTGCCTACATATGATTCTTGTTAAAAAGTATTAATGACATGTCATTTTATATTTTGAATGTGACCATGAAAACACAAGGAGTTGATTCTAGAGTTT 4453 0.3829 MTIDVPPSGAQSVRTNRSSFGSSNSYDGTPIHNCASVSNGDGYDSDGSNFAPPTPTTLSMAIPAELAEAVPLIDRFQVEGFLKLMHKQIQSAGKRGFFSKRSVGPQVREKFTIQDMLCFQKDPIPTSLLKLNGDLASRATKLFQLILKYIGVDSSDRVTPIIIEERVELVGKLYKQCLKRSELRDELFVQISKQTRNNPEREYLIKAWELMYICALSMPPSKDIGAYLSEYVHNVAHGLTNIDPEIQALALNTLNALKHSVKAGPRHIIPGPMEIEALLTGKKLTTIVFFLDETFEEITYDMSTTVADAVEELAGIIKLSTYSSFSLFECRKIVTGSKSPESGNGMSFSNSWLVNKEYIGLDDNKYIGDLLAEFKAVKDRSKGEILQCKLIFKKKLFRESDEAVTDTMFLQLSYVQLQHDYILGNYPIGRDDAAQLSALQILAEIGFVRRPESCTDWNSFLERFLPRQIAMTRAKREWELDILSCYHSLAHVTKDDARQQFLHILRTLPYGFSVFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPIPKEYMHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQLLEKLREKQKQEEEMLKEVESLKQSLKADKQSLAEVTNDRDKLRSLCDEKDKALQAKILEKRNMEAKMSKLSNLVTENATKKDPIQEVSQKLEDDLKLCKGELLVAEETIKSLRSEKLILERKLSELENKSAEEISSLQCKLEQERKTLNSQVYDLERKLDMCRQELTVAESTLSVKDSELAALKNNLDELEELREMKEDIDRKNEQTAGILKMQAAQLAEMELLYKEEQVLRKRYFNTIEGGGLHMKGKIRVYCRLRPLCEKEIANKERDSLNTVDEFTVEHRWKDDKPKQHMYDRVFDADATQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGAEHNPGLTPRATAELFRILRRDSNKYSFSLKAYMLELYQDTLVDLLLPKHAKRLKLDIKKDSKGMVAVENVTIVPISNVEELNSIIQRGSELRHTSGTQMNEESSRSHLILSIVIECTNLQSQSTARGKLSFVDLAGSERVKKSGSAGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPTESSLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRRAEDEDLEEIQEERPTKDRTDGRHSM 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03496 1215 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 98 281 - -
Pste1g03496 1215 Pfam MyTH4 domain 172 277 IPR000857 GO:0005856
Pste1g03496 1215 Coils Coil 587 628 - -
Pste1g03496 1215 PRINTS Kinesin heavy chain signature 1061 1079 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste1g03496 1215 PRINTS Kinesin heavy chain signature 911 932 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste1g03496 1215 PRINTS Kinesin heavy chain signature 1030 1047 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste1g03496 1215 PRINTS Kinesin heavy chain signature 1110 1131 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste1g03496 1215 MobiDBLite consensus disorder prediction 1186 1215 - -
Pste1g03496 1215 Pfam FERM central domain 401 515 IPR019748 -
Pste1g03496 1215 SUPERFAMILY PH domain-like 515 589 - -
Pste1g03496 1215 Coils Coil 643 663 - -
Pste1g03496 1215 SUPERFAMILY Prismane protein-like 778 830 IPR011254 GO:0003824|GO:0016491
Pste1g03496 1215 FunFam Kinesin-like calmodulin binding protein 398 509 - -
Pste1g03496 1215 CDD FERM_B-lobe 410 508 IPR019748 -
Pste1g03496 1215 PANTHER MYOSIN VII, XV 7 156 - -
Pste1g03496 1215 ProSiteProfiles MyTH4 domain profile. 119 279 IPR000857 GO:0005856
Pste1g03496 1215 SMART B41_5 280 515 IPR019749 -
Pste1g03496 1215 Gene3D - 513 594 IPR011993 -
Pste1g03496 1215 Gene3D Kinesin motor domain 828 1162 IPR036961 -
Pste1g03496 1215 SMART MyTH4_1 119 279 IPR000857 GO:0005856
Pste1g03496 1215 SUPERFAMILY Second domain of FERM 393 510 IPR035963 -
Pste1g03496 1215 Gene3D MyTH4 domain 98 280 IPR038185 -
Pste1g03496 1215 Gene3D - 408 508 IPR014352 -
Pste1g03496 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 839 1187 IPR027417 -
Pste1g03496 1215 ProSiteProfiles FERM domain profile. 284 609 IPR000299 GO:0005856
Pste1g03496 1215 Coils Coil 692 719 - -
Pste1g03496 1215 FunFam Kinesin-like calmodulin-binding protein 779 1162 - -
Pste1g03496 1215 CDD KISc_C_terminal 837 1162 - -
Pste1g03496 1215 ProSiteProfiles Kinesin motor domain profile. 839 1160 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste1g03496 1215 SMART kinesin_4 837 1168 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste1g03496 1215 Coils Coil 735 755 - -
Pste1g03496 1215 ProSitePatterns Kinesin motor domain signature. 1060 1071 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pste1g03496 1215 Pfam Kinesin motor domain 845 1160 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste1g03496 1215 Coils Coil 763 796 - -
Pste1g03496 1215 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 283 397 - -
Pste1g03496 1215 Gene3D - 1163 1211 - -
Pste1g03496 1215 Gene3D - 283 398 - -
Pste1g03496 1215 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03496 Pste-Chr1 16380751 16390223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03496 28 1210 Calmodulin-binding Proteins AT5G65930 67.880 0.0 1670