Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03493 CCTCTTTTAAAACAAAGTTGTGGCTGAGATCCAATCTCTCTTCTTCTTCACCCCCACTTCAAGAAAGGGAACTCCATTAAACACACGCCATTATATCAGCATAATAAGTTCATAAGTTCTCTACTTCAGATTCAATTCAAAGCTATTTTTCCGTAACCCTTTTTTACTTACACATCATTGCTACATCTTTTGTGAATTAAAGTTTAATTTCATGCACGTGAGTTATGCTATATAGCTAGCACAGCTTTAGAAGGAAAAGGGCACGTTGATATATAGCATATCATTGGAGTTTCCTGTTTTGTAACAAAGAGTGTTAATTTGGGATTGATGCTTGCGGTGTCACCTTTGAGGAGCATCAAAGATGAAAAGAAGCAAGGAGAGATGGAGGGTTTCTCGATGGCAACAACCGATGATGTTGACTTTGGTGACCTTACTGAAGGGAACTTATTGGAGAGTATCAACTTCGATGACCTCTTTGTCGGGATCGACGTTGACGGAGATGTCTTGCCGGACTTGGAAATGTTCGGTGAGTTCTCCGTCAGCGGCGAGGAATCGATGAACTCCTCCGGGGAGGAGAACAGCAAGGTGGAGATGAATGATCAGAATATTATCACTGTTTCAAAGAAGGAAGAGGAAGATAAAACTTCTTCTGCTGCTTCCGCTCAACACTTGGGGTCAAACCGAGGAGAGGAGATAGTGAGCAAGAGAGACCAATCCGTGGTGTCCAATATTCCACCACCAAAGGGAAGAAAATCTTCATCAACTCAATCCAAGAATGATAGTAGTAGTAATAATCCTCAAGGGAAAAGAAAAGTCAAGGTGGATTGGACCCCAGAGTTGCACAGACGATTCGTGCAAGCTGTGGAACAGCTAGGAGTGGATAAGGCGGTGCCATCAAGGATTTTGGAGATTATGGGAATTGATTGTCTCACTCGCCATAACATTGCAAGCCACCTTCAAAAATATAGATCTCATAGGAAACATTTGCTAGCACGAGAGGCAGAAGCAGCGAGTTGGAGTCAAAGGAGGCAATTGTATGGTGTTGGTGGTTGTGGAGGGAAGAGAGACGGTAGTCCATGGCTGGCACCCACCATGGGGTTCCCTCAAATGACCACAATGCACCATTTTAGACCTCTACATGTATGGGGGCACCCCTCCATGGACCAATCCTTCATGCACATGTGGCCTAAGCAACTTCCACATTCACCACCACTCTCATGGCCACCGCCGGCACCACCTCAAGACCCTTCATTTTGGCACCAACGGGCTCCTAACGCACTAATCCCAGGAACAGCTTGTTTTCCACAACCCCTGACACCAACGAGATTTGGAAGTCCCCCAGTGCCGGGCATACCACCACCTCATGGAATATACAAAGCAGCAGATCACGGCATTGGCGTCCCTATTCCTCGTCCCCCACTCGACTTTCATCCGTCAAAGGAGTGCATAGATGCAGCCATTGGAGATGTTTTATCAAAGCCATGGCTGCCGCTACCACTTGGACTTAAGGCTCCAGCGATTGATAGTGTAATGAGTGAATTACAGAGACAAGGATTTCCAAACATTCCACCCTCTAGTACTTGAAACCAACCCTTCATGGAAGAATTCTTCCCTTATGATGTGGCCCCTTGAGATGGCCACGTAACCCTAATTCGACGACTTCTCATCCATTAGATGTTACATATATGTTACATCTACGCTACTATGTGAGTGATTCATATCTTTCTTCTTTTGCTTTTGAGAGCAGAAAGAAATTAAAGAAGTAAAAACTTAAGTTCTTTTCTAATTTTCATGTGCTATAATGTATGAGTTAAAGGTTTGGAGCAGTGATCATGATAATCATTTTGTATATGGACGGTTGTAAAGACAGTTATTTTTGTAATAGCTGTATAAGCTGAGGAAATCCAAATAAACACTACTTTAATCAAATATTTCTTTTTCGGGTAAACCTCTAATCAAGGACTCACG 1968 0.435 MLAVSPLRSIKDEKKQGEMEGFSMATTDDVDFGDLTEGNLLESINFDDLFVGIDVDGDVLPDLEMFGEFSVSGEESMNSSGEENSKVEMNDQNIITVSKKEEEDKTSSAASAQHLGSNRGEEIVSKRDQSVVSNIPPPKGRKSSSTQSKNDSSSNNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQRRQLYGVGGCGGKRDGSPWLAPTMGFPQMTTMHHFRPLHVWGHPSMDQSFMHMWPKQLPHSPPLSWPPPAPPQDPSFWHQRAPNALIPGTACFPQPLTPTRFGSPPVPGIPPPHGIYKAADHGIGVPIPRPPLDFHPSKECIDAAIGDVLSKPWLPLPLGLKAPAIDSVMSELQRQGFPNIPPSST 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03493 418 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 417 IPR044825 GO:0003700|GO:0045893
Pste1g03493 418 MobiDBLite consensus disorder prediction 71 166 - -
Pste1g03493 418 NCBIfam myb-like DNA-binding domain, SHAQKYF class 162 216 IPR006447 GO:0003677
Pste1g03493 418 MobiDBLite consensus disorder prediction 127 161 - -
Pste1g03493 418 MobiDBLite consensus disorder prediction 1 22 - -
Pste1g03493 418 MobiDBLite consensus disorder prediction 72 94 - -
Pste1g03493 418 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 159 218 IPR017930 -
Pste1g03493 418 SUPERFAMILY Homeodomain-like 160 219 IPR009057 -
Pste1g03493 418 Gene3D - 159 220 - -
Pste1g03493 418 Pfam Myb-like DNA-binding domain 165 214 IPR001005 -
Pste1g03493 418 FunFam Two-component response regulator 158 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03493 Pste-Chr1 16322931 16328443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03493 1 369 G2-like Transcription Factor Family AT5G44190 39.604 1.08e-63 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste1g03493 Myb_DNA-binding 5.3e-08 CL0123