Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03492 AAAAGGATGTTGAAGATGGAAAAGTGGTAGAAAGAAAGGAAACAGAGACAAATTAGTTAGTAGCTTGATAGTTGGGAGAAAAATTAGCATAAGGTGGTGGTAAAAAATGAAAGAAAGCGAGGAGATGTTCCCCCTGAAATGCAGCATCTTTGCTTACTACGCCGCCGTGACCAGCATCCTCCTGCTGTTACCTCCGGCGACTTCCCAAGCCCAGATTCTGAAAAGAGTGCCCCACAGTTTTGGTCCCTTCAACCAATCGTACTTCACCACCTTCGAGGTGCTGCCCAACGCCGCCATCAACCTCGGCGCTCTCCAAGTAACGCCCGACAGCACCGGCGACGTCTCCCTAACCAACAAATCCGGCAGAGTCTTCTTCAAACAACCCTTCACGCTCTGGGACGACGATGACAACCTCAACGGAAAACTCGTTTCTTTCAACACTTCCTTCCTCATCAACGTTTACCGCCCCAAAAACGAAACTCCCGGCGAAGGCCTCGCCTTCCTCATCGCGCCTTCCACCACCATCCCCGCCAACAGCTTCGGCCAGTTCCTCGGCCTCACCAACGCCTCCACTGACGGCAACTCCTCAAACCAAATCCTCGCCGTCGAACTTGACACCGTGAAGCAGGACTTCGATCCCGACGACAACCACATCGGCTTGGACATTAACGGCGTTAGGTCCAACGTCACTGCTTCTCTCACTCCCCTGGGTTTCGAGATCTCGCCTCTCGCCACGCGCTTCCACGTGCTCTGGGTTGAGTACGACGGTGACCGCAAGGTGATTTACGTGTACATCGCGGAGCAGCCTGATAAGGACACGCCTATAGTTCCGAAACCGTCTAAGCCGGTTTTGAGTTCGGGCCTCGATCTTAAAAATGTTCTGAACAAGGTTTCTTATTTTGGGTTCTCTGCTTCCACCGGTGACAACGTTGAACTGAACTGCGTGCTGAGTTGGAACATTTCTATTGAGGTTTTCCCCGAAAAGAAAGGGAATGCGAAAGCTTTTAAGATTGGGTTGGGTGTTGGGGTGCCTCTCGTGGTTCTTATTGTAGCCGGTCTCATTGGGTGGGTTTACTGGTTGAAAAGAAAGAATAGGGAAAGCGAGACTCAGATTTTGGGAACTCTCAAGAGTTTACCTGGAACTCCCCGAGAGTTTAGATATCATGAACTCAAGAAAGCCACTAATAATTTCGATGAGAAGCATAAGCTTGGGCAAGGTGGATACGGCGTCGTTTATCGAGGTACACTGCCCAAGGAGAATTTGGAAGTTGCCGTTAAGATGTTCTCAAGAGATAAGATGAAAAGCACTGATGATTTCTTGGCTGAACTCTCCATCATCAACCGCCTTCGTCACAAAAACCTTGTTCGCTTACTGGGATGGTGTCACAGAAACGGGGTGCTGCTCTTGGTGTACGATTACATGCCGAATGGGAGTTTGGACAACCACATATTCAGTGAGGAAGGGAGCAGCAGTGGGGGACTAAGTTGGCCTCTGAGGTACAAGATCATAACAGGGGTGGCGTCTGCATTGAATTACCTACACAACGAGTATGATCAGAAAGTGGTCCACAGAGATTTAAAGGCGAGCAACATCATGGTGGATTCGGACTTCAATGCGCGGTTAGGGGATTTCGGGTTGGCTCGAGCATTGGAGAATGATAAAACATCTTATGCAGAGATGGAAGGAGTGCATGGCACCATGGGGTACATTGCACCAGAGTGCTTTCACACGGGGAGAGCCACAAGGGAATCTGATGTATATGGATTTGGAGCAGTGTTGCTTGAGGTGGTGTGTGGGCAGAGACCATGGACAAAGATTGAGGGGTATCAGTGCTTGGTGGATTGGGTATGGCACCTGCACCGTGAGCAAAGAATACTTGATGCAGTGGATCCCAGACTAGGGAATGATTGCGTGGTTCAAGAAGCAGAGAGGGTTCTGAAATTGGGACTAGCATGCTCTCACCCCATTGCAAGTGAGAGACCAAAAATGCAAGCAATAGTTCAGATAATATCAGGTTCAGTGAATGTGCCTCATATCCCACCTTTCAAGCCAGCTTTTGTGTGGCCAGCGGTGGATCTATCAAGCCTTGCAAGTGACCTTACACCAACTACCACAACTGAGTACACACCCATGAACAGTGACACTAACACTAACACACACATTCTATGCATCTTGAATTCTCTGATAGCAGCTCTCTCGTCTAAAACACCCTCCAACTTCAAAACAACCTTTTCTTTTTGTGTTCATGTTCATCACCCCTTCCCACTTGGTTAAGTTTTCTTCATCTGGAAAAAAACGGAAGAAAAATTCTTCTCACTTTTCCCCTTTTTGTTTTTTATTCCTAATTTTATTTTATTTTTAAGTAATCAACTATTGATTCTCTTTTTACTTTCTTTTTCCTCTCATTTTTATTGGAAACGGAACAAATTGGGGTGTATATCTGTAAATTTTTATCAAATAAGATATTCC 2470 0.4713 MKESEEMFPLKCSIFAYYAAVTSILLLLPPATSQAQILKRVPHSFGPFNQSYFTTFEVLPNAAINLGALQVTPDSTGDVSLTNKSGRVFFKQPFTLWDDDDNLNGKLVSFNTSFLINVYRPKNETPGEGLAFLIAPSTTIPANSFGQFLGLTNASTDGNSSNQILAVELDTVKQDFDPDDNHIGLDINGVRSNVTASLTPLGFEISPLATRFHVLWVEYDGDRKVIYVYIAEQPDKDTPIVPKPSKPVLSSGLDLKNVLNKVSYFGFSASTGDNVELNCVLSWNISIEVFPEKKGNAKAFKIGLGVGVPLVVLIVAGLIGWVYWLKRKNRESETQILGTLKSLPGTPREFRYHELKKATNNFDEKHKLGQGGYGVVYRGTLPKENLEVAVKMFSRDKMKSTDDFLAELSIINRLRHKNLVRLLGWCHRNGVLLLVYDYMPNGSLDNHIFSEEGSSSGGLSWPLRYKIITGVASALNYLHNEYDQKVVHRDLKASNIMVDSDFNARLGDFGLARALENDKTSYAEMEGVHGTMGYIAPECFHTGRATRESDVYGFGAVLLEVVCGQRPWTKIEGYQCLVDWVWHLHREQRILDAVDPRLGNDCVVQEAERVLKLGLACSHPIASERPKMQAIVQIISGSVNVPHIPPFKPAFVWPAVDLSSLASDLTPTTTTEYTPMNSDTNTNTHILCILNSLIAALSSKTPSNFKTTFSFCVHVHHPFPLG 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03492 722 PANTHER - 72 646 - -
Pste1g03492 722 ProSitePatterns Protein kinases ATP-binding region signature. 368 391 IPR017441 GO:0005524
Pste1g03492 722 FunFam probable L-type lectin-domain containing receptor kinase S.5 439 640 - -
Pste1g03492 722 Pfam Protein kinase domain 363 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03492 722 FunFam Putative L-type lectin-domain containing receptor kinase S.5 39 300 - -
Pste1g03492 722 SUPERFAMILY Concanavalin A-like lectins/glucanases 45 291 IPR013320 -
Pste1g03492 722 ProSitePatterns Legume lectins beta-chain signature. 165 171 IPR019825 -
Pste1g03492 722 Gene3D - 42 302 - -
Pste1g03492 722 CDD STKc_IRAK 368 635 - -
Pste1g03492 722 Gene3D Transferase(Phosphotransferase) domain 1 439 641 - -
Pste1g03492 722 ProSiteProfiles Protein kinase domain profile. 362 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03492 722 Gene3D Phosphorylase Kinase; domain 1 347 438 - -
Pste1g03492 722 FunFam probable L-type lectin-domain containing receptor kinase S.5 347 438 - -
Pste1g03492 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Pste1g03492 722 SMART serkin_6 362 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03492 722 Pfam Legume lectin domain 55 293 IPR001220 GO:0030246
Pste1g03492 722 CDD lectin_legume_LecRK_Arcelin_ConA 48 284 IPR001220 GO:0030246
Pste1g03492 722 SUPERFAMILY Protein kinase-like (PK-like) 344 668 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03492 Pste-Chr1 16320929 16324222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03492 67 647 Receptor kinase-like Gene Family AT3G53810 39.708 1.58e-127 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste1g03492 Pkinase 1.6e-49 CL0016