Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03490 ATGCCGTCTCTTATATATTCCAATTCTCTTACAAATGCGAATCTTTTTTCATCTTTTTATGATCATATTCCAAAAGAAAATTCTCTTTTGCTCTTTTGTTTTCTATTGGGGAATCCTTATCAAGATGACGTTGATGTGATGAACGTGCTCAAGAAGGCCATTAAGGAACCCAACGATCTTCAATGGAATAACGCAGATGTGTGTAAATGGACACACGTTCAGTGCAACACCATGAAGAGGGTCACTGCAATTCAGATTGGGGGACTGAGTCTGAATGGTTCCCTGCCTAAGGAACTGGGGCAGCTCTCAGAGTTGACACGTTTTGAGTGCATGAGCAATGGTTTCACTGGACCATTCCCTCACATGCCAAAGTCCCTTCAGTTTCTGCTCATTCACAACAACAACTTCGACTCCTTTCCAGTTGATTTCTTCACTGGCATGACCAATTTGCAAGATGTCAGTATTGGCTATAACCCTTTCCCCAACTGGGGGATTCCTGATAGCCTCAAGGACTGTGTTTCTCTCAGGAGTTTCTCTGCAATCAGTGCTGGTTTTGATGGGAAAATCCCAGATTTTTTTGGCAAAGATGGTCCCTTCCCAGGTTTGGTTTCTCTTTCCTTGAGTTTTAATTCTCTTGAAGGAGGGTTGCCTGCAACCCTTTCTGGGAGTTCTATAGAGACCCTTTGGGTGAATGGTCAACAAAGTAGTGGTAAACTCAATGGTACTCTTGTTATGTTAAAGAGCATGACATCTTTGAAACAAATTTGGGTACACGGTAACTCATTCACAGGTCCTATACCAGATTTTTCAGATCATGAACAACTGTTTGATGTTAGTTTAAGAGATAACCTGTTGACTGGTGTTGTTCCACCCTCACTCATTAATCTTCCTGCTCTTAAAGTTGTGAATTTGACCAATAACTTGCTTCAAGGGTCTCCTCCTTTGTTCAAAAACGGAGTGCGGGTTGATAATGATGTAGAGAAGGGCACCAATAGTTTTTGCACAAAGGAGGCTGGTGAGCCATGTAGCCCCCTTGTGGATGCTTTGTTGTCTGTTGTTGAACCTTTGGGGTATCCTCTAAGACTTGCTGAAAGTTGGAAGGGGAATGACCCTTGTGCTCCAACATGGATGGGTATTGTTTGCTCAGGTGGAAACATTTCCATTATTAATTTTCAGAACTTCAATCTCTCTGGCAACATTTCTCCCACTTTTGCTAGGCTTACATCTGTGACAAAGTTGCTTCTTGCCAACAACAACCTCATTGGTACCATACCAAGTGAACTCACCAGTATGCCTCTTCTGAAAGAGCTGGATGTTTCCAATAATAAATTGTATGGTAAGGTGCCATCTTTCCGTGCAGATGTAGTTCTTAAAACTGGTGGAAATCCTGATATTGGAAAGGATACACCTCAAGCCCCTCCTGCCTCAAATCCTGGGGATGGGGGTAAATCAGGAGGTAAAGGTAAGAAAAGTAATACTCCAGTAATTGTTGGCACTGTGGCGGGGGGCGTCAGTTTGCTTGGTTTAGTGGCTCTGGTGTTTATTTTGTATGGTAGAAAACAAAAGCGTGATGGCAAAGTTCAAAGTCCCAGTGCAATAGTGATACATCCTCGTCATTCTGGAGATGGAAATGCTCTGAAGATAAGTGTTGCAGCTGTAGGTGCAGCTTCTGGGGCTAGTGGTGGAGGAACTGGTTCACTTAGTCCGGCTAGTAGTATTCAACATGTGGAAGCTGGTAATATGGTGATTTCAATACAAGTTTTGAGGGAAGTTACAAACAATTTCAGTCAGGGAAACATATTGGGAAGAGGTGGTTTTGGTACTGTATACAAGGGAGAATTGCATGATGGAACAAAGATTGCAGTGAAAAGGATGGAATCTGGAGTGATGGGTGAGAAGGGGTTGAGTGAGTTTGAGTCTGAAATTTCAGTACTTACTAAGGTTCGACATAGGCATCTGGTAGCACTTGAAGGCCATTGCTTGGATGGAAATGAGAAGCTTCTTGTGTATGAATACATGCCTCAGGGTCCTCTTAGTAAACATTTATTTGATTGGAAAGAGGAAGGGTTACAACCACTGTCATGGAAGAGAAGGCTTTCCATTGCCTTGGATGTTGCTAGAGGTGTCGAATATCTTCACGGTTTGGCCCAACAAATTTTCATCCATAGGGATCTAAAACCATCAAACATCCTGCTCGGGGATGATATGCGGGCTAAAGTGTCAGACTTTGGATTAGTCCGGCTTGCTCCGGAAGGACAGACATCATTTGAGACCAGGCTTGCTGGAACTTTTGGATATTTGGCTCCAGAGTATGCAGTCACTGGACGAGTTACAACAAAGGTTGATGTATACAGCTATGGGGTGATTCTCATGGAGATGATAACAGGAAGGAAAGCAATTGACAACAGCCAAACAGAAGAGAATGTCCACCTTGTTACATGGTTCAGAAGGATGTTGCTGAACAAAGACTCATTCGGAAAGCTCATTGACCCCATAATGGATGTTGATGAGGAGACCTTACCAAGTTTTAGGACTGTGGGCGAGTTGGCCGGTCATTGTTGCGCAAGGGAGCCATACCAGCGTCCTGACATGAGTCATGTGGTGAATGTGCTCGCTCCTCTTGTTGAGATTTGGAAGCCTTCTGAAGAAGATGATGATGACATTTATGGAATTGACTTAGATATGACCTTACCTCAAGCACTCAGTAAGTGGCAGGCTATTGAAGGAAAGAACACCTTTGATGTTTCATCCTCTTCATCAGTGCTTACTAGTGGAGATAATACACAGTCTAGCATAGCAACTAGGCCTTCTGGTTTTGCTGTTTCCTTTGCTTCCTCTGATGGAAGATGATGTTTGACTTACATTTACATTGCTTGTGCCTATTTTTTACTTCTCCACAAAACTTTGGAGCTCTTTATAGGCTTTTTTATTTTTTTATAGTGTCTAGTTGGACTGGCATATACTACACCAATTACTCCACAAACTCCCTTACAGTATCAAGGTATTTTGGTCTATTGATTTTTGTTTTTTATATTTAGCAACAGAGATGCTGAACAAGTAGTTGAACTTGTGTTTTCATTCTTTAGAGTTCATT 3094 0.4234 MPSLIYSNSLTNANLFSSFYDHIPKENSLLLFCFLLGNPYQDDVDVMNVLKKAIKEPNDLQWNNADVCKWTHVQCNTMKRVTAIQIGGLSLNGSLPKELGQLSELTRFECMSNGFTGPFPHMPKSLQFLLIHNNNFDSFPVDFFTGMTNLQDVSIGYNPFPNWGIPDSLKDCVSLRSFSAISAGFDGKIPDFFGKDGPFPGLVSLSLSFNSLEGGLPATLSGSSIETLWVNGQQSSGKLNGTLVMLKSMTSLKQIWVHGNSFTGPIPDFSDHEQLFDVSLRDNLLTGVVPPSLINLPALKVVNLTNNLLQGSPPLFKNGVRVDNDVEKGTNSFCTKEAGEPCSPLVDALLSVVEPLGYPLRLAESWKGNDPCAPTWMGIVCSGGNISIINFQNFNLSGNISPTFARLTSVTKLLLANNNLIGTIPSELTSMPLLKELDVSNNKLYGKVPSFRADVVLKTGGNPDIGKDTPQAPPASNPGDGGKSGGKGKKSNTPVIVGTVAGGVSLLGLVALVFILYGRKQKRDGKVQSPSAIVIHPRHSGDGNALKISVAAVGAASGASGGGTGSLSPASSIQHVEAGNMVISIQVLREVTNNFSQGNILGRGGFGTVYKGELHDGTKIAVKRMESGVMGEKGLSEFESEISVLTKVRHRHLVALEGHCLDGNEKLLVYEYMPQGPLSKHLFDWKEEGLQPLSWKRRLSIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGQTSFETRLAGTFGYLAPEYAVTGRVTTKVDVYSYGVILMEMITGRKAIDNSQTEENVHLVTWFRRMLLNKDSFGKLIDPIMDVDEETLPSFRTVGELAGHCCAREPYQRPDMSHVVNVLAPLVEIWKPSEEDDDDIYGIDLDMTLPQALSKWQAIEGKNTFDVSSSSSVLTSGDNTQSSIATRPSGFAVSFASSDGR 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03490 949 FunFam Leucine-rich repeat receptor-like kinase 344 468 - -
Pste1g03490 949 CDD STKc_IRAK 601 874 - -
Pste1g03490 949 SUPERFAMILY L domain-like 47 318 - -
Pste1g03490 949 Gene3D Ribonuclease Inhibitor 40 341 IPR032675 -
Pste1g03490 949 Pfam Protein kinase domain 596 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03490 949 Pfam Leucine rich repeat N-terminal domain 347 382 IPR013210 -
Pste1g03490 949 Pfam Leucine rich repeat N-terminal domain 42 76 IPR013210 -
Pste1g03490 949 ProSiteProfiles Protein kinase domain profile. 595 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03490 949 Gene3D Phosphorylase Kinase; domain 1 565 672 - -
Pste1g03490 949 SMART serkin_6 595 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03490 949 SUPERFAMILY L domain-like 346 451 - -
Pste1g03490 949 PANTHER OSJNBA0070M12.3 PROTEIN 32 949 - -
Pste1g03490 949 MobiDBLite consensus disorder prediction 462 490 - -
Pste1g03490 949 SUPERFAMILY Protein kinase-like (PK-like) 573 879 IPR011009 -
Pste1g03490 949 FunFam Receptor-like kinase TMK4 41 339 - -
Pste1g03490 949 Gene3D Transferase(Phosphotransferase) domain 1 673 891 - -
Pste1g03490 949 FunFam receptor protein kinase TMK1 558 672 - -
Pste1g03490 949 Gene3D Ribonuclease Inhibitor 345 469 IPR032675 -
Pste1g03490 949 ProSitePatterns Protein kinases ATP-binding region signature. 601 623 IPR017441 GO:0005524
Pste1g03490 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Pste1g03490 949 FunFam receptor protein kinase TMK1 673 890 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03490 Pste-Chr1 16312966 16317252 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03490 81 885 Receptor kinase-like Gene Family AT1G55610 29.812 1.18e-78 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pste1g03490 Pkinase 3.6e-46 CL0016